Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea

E. Messina; R. Denaro; F. Crisafi; F. Smedile; S. Cappello; M. Genovese; L. Genovese; L. Giuliano; D. Russo; M. Ferrer; Peter Golyshin

doi:10.1016/j.margen.2015.10.006

Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea

E. Messina, R. Denaro, F. Crisafi, F. Smedile, S. Cappello, M. Genovese, L. Genovese, L. Giuliano, D. Russo, M. Ferrer, Peter Golyshin

European Commission (FP7-KBBE-2009-3-5-01, FP7-KBBE-2009-2B-226977, FP7-OCEAN.2011-2-287589)

Research output: Contribution to journal › Article › peer-review

Abstract

Cycloclasticus sp. 78-ME isolated from petroleum deposits of the sunken tanker "Amoco Milford Haven" (Gulf of Genoa, Ligurian Sea, Italy) could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78-ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84% and 53.28% of the G + C content respectively. A total of 2585 protein-coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring-cleavage dioxygenases were found

Original language	English
Pages (from-to)	11-13
Journal	Marine Genomics
Volume	25
DOIs	https://doi.org/10.1016/j.margen.2015.10.006
Publication status	Published - 24 Oct 2015

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Messina, E., Denaro, R., Crisafi, F., Smedile, F., Cappello, S., Genovese, M., Genovese, L., Giuliano, L., Russo, D., Ferrer, M., & Golyshin, P. (2015). Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea. Marine Genomics, 25, 11-13. https://doi.org/10.1016/j.margen.2015.10.006

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title = "Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea",

abstract = "Cycloclasticus sp. 78-ME isolated from petroleum deposits of the sunken tanker {"}Amoco Milford Haven{"} (Gulf of Genoa, Ligurian Sea, Italy) could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78-ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84\% and 53.28\% of the G + C content respectively. A total of 2585 protein-coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring-cleavage dioxygenases were found",

author = "E. Messina and R. Denaro and F. Crisafi and F. Smedile and S. Cappello and M. Genovese and L. Genovese and L. Giuliano and D. Russo and M. Ferrer and Peter Golyshin",

year = "2015",

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Messina, E, Denaro, R, Crisafi, F, Smedile, F, Cappello, S, Genovese, M, Genovese, L, Giuliano, L, Russo, D, Ferrer, M & Golyshin, P 2015, 'Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea', Marine Genomics, vol. 25, pp. 11-13. https://doi.org/10.1016/j.margen.2015.10.006

Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea. / Messina, E.; Denaro, R.; Crisafi, F. et al.
In: Marine Genomics, Vol. 25, 24.10.2015, p. 11-13.

Research output: Contribution to journal › Article › peer-review

TY - JOUR

T1 - Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea

AU - Messina, E.

AU - Denaro, R.

AU - Crisafi, F.

AU - Smedile, F.

AU - Cappello, S.

AU - Genovese, M.

AU - Genovese, L.

AU - Giuliano, L.

AU - Russo, D.

AU - Ferrer, M.

AU - Golyshin, Peter

PY - 2015/10/24

Y1 - 2015/10/24

N2 - Cycloclasticus sp. 78-ME isolated from petroleum deposits of the sunken tanker "Amoco Milford Haven" (Gulf of Genoa, Ligurian Sea, Italy) could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78-ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84% and 53.28% of the G + C content respectively. A total of 2585 protein-coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring-cleavage dioxygenases were found

AB - Cycloclasticus sp. 78-ME isolated from petroleum deposits of the sunken tanker "Amoco Milford Haven" (Gulf of Genoa, Ligurian Sea, Italy) could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78-ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84% and 53.28% of the G + C content respectively. A total of 2585 protein-coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring-cleavage dioxygenases were found

U2 - 10.1016/j.margen.2015.10.006

DO - 10.1016/j.margen.2015.10.006

M3 - Article

SN - 1874-7787

VL - 25

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JO - Marine Genomics

JF - Marine Genomics

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