Runs of homozygosity in killer whale genomes provide a global record of demographic histories

Andrew D. Foote; Rebecca Hooper; Alana Alexander; Robin W. Baird; Charles Scott Baker; Lisa Ballance; Jay Barlow; Andrew Brownlow; Tim Collins; Rochelle Constantine; Luciano Dalla Rosa; Nicholas J. Davison; John W. Durban; Ruth Esteban; Laurent Excoffier; Sarah L. Fordyce Martin; Karin A. Forney; Tim Gerrodette; M. Thomas P. Gilbert; Christophe Guinet; M. Bradley Hanson; Songhai Li; Michael D. Martin; Kelly M. Robertson; Filipa I. P. Samarra; Renaud de Stephanis; Sara B. Tavares; Paul Tixier; John A. Totterdell; Paul Wade; Jochen B.W. Wolf; Guangyi Fan; Yaolei Zhang; Phillip A. Morin

doi:10.1111/mec.16137

Runs of homozygosity in killer whale genomes provide a global record of demographic histories

Andrew D. Foote
, Rebecca Hooper
, Alana Alexander
, Robin W. Baird
, Charles Scott Baker
, Lisa Ballance
, Jay Barlow
, Andrew Brownlow
, Tim Collins
, Rochelle Constantine
, Luciano Dalla Rosa
, Nicholas J. Davison
, John W. Durban
, Ruth Esteban
, Laurent Excoffier
, Sarah L. Fordyce Martin
, Karin A. Forney
, Tim Gerrodette
, M. Thomas P. Gilbert
, Christophe Guinet

M. Bradley Hanson, Songhai Li, Michael D. Martin, Kelly M. Robertson, Filipa I. P. Samarra, Renaud de Stephanis, Sara B. Tavares, Paul Tixier, John A. Totterdell, Paul Wade, Jochen B.W. Wolf, Guangyi Fan, Yaolei Zhang, Phillip A. Morin

School of Environmental & Natural Sciences

University of Exeter
Norwegian University of Science and Technology
University of Otago
Oregon State University
National Oceanic and Atmospheric Administration, La Jolla, California
University of Glasgow
University of Auckland
Cascadia Research, Washington
Wildlife Conservation Society
Universidade Federal do Rio de Janeiro
CIRCE, Conservation, Information and Research on Cetaceans
Bern University
National Oceanic and Atmopsheric Administration (NOAA)
CNRS-Université de La Rochelle
National Oceanic and Atmospheric Administration, Seattle
Chinese Academy of Sciences
University of Iceland
University of St. Andrews
Cetacean Research Centre
Ludwig-Maximilian Universität München
University of Southern Denmark

Research output: Contribution to journal › Article › peer-review

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Original language	English
Pages (from-to)	6162-6177
Number of pages	16
Journal	Molecular Ecology
Volume	30
Issue number	23
Early online date	20 Aug 2021
DOIs	https://doi.org/10.1111/mec.16137
Publication status	Published - Dec 2021

Keywords

Demography
Orcinus orca
Runs of Homozygosity
inbreeding
killer whale
whole genome sequencing

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10.1111/mec.16137Licence: CC BY

mec.16137Final published version, 1.47 MBLicence: CC BY-NC

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Foote, A. D., Hooper, R., Alexander, A., Baird, R. W., Baker, C. S., Ballance, L., Barlow, J., Brownlow, A., Collins, T., Constantine, R., Dalla Rosa, L., Davison, N. J., Durban, J. W., Esteban, R., Excoffier, L., Fordyce Martin, S. L., Forney, K. A., Gerrodette, T., Gilbert, M. T. P., ... Morin, P. A. (2021). Runs of homozygosity in killer whale genomes provide a global record of demographic histories. Molecular Ecology, 30(23), 6162-6177. https://doi.org/10.1111/mec.16137

@article{451838843b7049ebb12cc79b0bbff5cd,

title = "Runs of homozygosity in killer whale genomes provide a global record of demographic histories",

keywords = "Demography, Orcinus orca, Runs of Homozygosity, inbreeding, killer whale, whole genome sequencing",

author = "Foote, \{Andrew D.\} and Rebecca Hooper and Alana Alexander and Baird, \{Robin W.\} and Baker, \{Charles Scott\} and Lisa Ballance and Jay Barlow and Andrew Brownlow and Tim Collins and Rochelle Constantine and \{Dalla Rosa\}, Luciano and Davison, \{Nicholas J.\} and Durban, \{John W.\} and Ruth Esteban and Laurent Excoffier and \{Fordyce Martin\}, \{Sarah L.\} and Forney, \{Karin A.\} and Tim Gerrodette and Gilbert, \{M. Thomas P.\} and Christophe Guinet and Hanson, \{M. Bradley\} and Songhai Li and Martin, \{Michael D.\} and Robertson, \{Kelly M.\} and Samarra, \{Filipa I. P.\} and \{de Stephanis\}, Renaud and Tavares, \{Sara B.\} and Paul Tixier and Totterdell, \{John A.\} and Paul Wade and Wolf, \{Jochen B.W.\} and Guangyi Fan and Yaolei Zhang and Morin, \{Phillip A.\}",

year = "2021",

month = dec,

doi = "10.1111/mec.16137",

language = "English",

volume = "30",

pages = "6162--6177",

journal = "Molecular Ecology",

issn = "0962-1083",

publisher = "Wiley-Blackwell",

number = "23",

}

Foote, AD, Hooper, R, Alexander, A, Baird, RW, Baker, CS, Ballance, L, Barlow, J, Brownlow, A, Collins, T, Constantine, R, Dalla Rosa, L, Davison, NJ, Durban, JW, Esteban, R, Excoffier, L, Fordyce Martin, SL, Forney, KA, Gerrodette, T, Gilbert, MTP, Guinet, C, Hanson, MB, Li, S, Martin, MD, Robertson, KM, Samarra, FIP, de Stephanis, R, Tavares, SB, Tixier, P, Totterdell, JA, Wade, P, Wolf, JBW, Fan, G, Zhang, Y & Morin, PA 2021, 'Runs of homozygosity in killer whale genomes provide a global record of demographic histories', Molecular Ecology, vol. 30, no. 23, pp. 6162-6177. https://doi.org/10.1111/mec.16137

TY - JOUR

T1 - Runs of homozygosity in killer whale genomes provide a global record of demographic histories

AU - Foote, Andrew D.

AU - Hooper, Rebecca

AU - Alexander, Alana

AU - Baird, Robin W.

AU - Baker, Charles Scott

AU - Ballance, Lisa

AU - Barlow, Jay

AU - Brownlow, Andrew

AU - Collins, Tim

AU - Constantine, Rochelle

AU - Dalla Rosa, Luciano

AU - Davison, Nicholas J.

AU - Durban, John W.

AU - Esteban, Ruth

AU - Excoffier, Laurent

AU - Fordyce Martin, Sarah L.

AU - Forney, Karin A.

AU - Gerrodette, Tim

AU - Gilbert, M. Thomas P.

AU - Guinet, Christophe

AU - Hanson, M. Bradley

AU - Li, Songhai

AU - Martin, Michael D.

AU - Robertson, Kelly M.

AU - Samarra, Filipa I. P.

AU - de Stephanis, Renaud

AU - Tavares, Sara B.

AU - Tixier, Paul

AU - Totterdell, John A.

AU - Wade, Paul

AU - Wolf, Jochen B.W.

AU - Fan, Guangyi

AU - Zhang, Yaolei

AU - Morin, Phillip A.

PY - 2021/12

Y1 - 2021/12

KW - Demography

KW - Orcinus orca

KW - Runs of Homozygosity

KW - inbreeding

KW - killer whale

KW - whole genome sequencing

U2 - 10.1111/mec.16137

DO - 10.1111/mec.16137

M3 - Article

SN - 0962-1083

VL - 30

SP - 6162

EP - 6177

JO - Molecular Ecology

JF - Molecular Ecology

IS - 23

ER -

Runs of homozygosity in killer whale genomes provide a global record of demographic histories

Keywords

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