Dr Rafael Bargiela

Research Software Engineer (Research Associate) BIO

  1. Article › Research › Peer-reviewed
  2. Published

    Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity

    Korzhenkov, A. A., Toshchakov, S. V., Bargiela, R., Gibbard, H., Ferrer, M., Teplyuk, A. V., Jones, D. L., Kublanov, I. V., Golyshin, P. & Golyshina, O., 28 Jan 2019, In : Microbiome. 7, 1, 11.

    Research output: Contribution to journalArticle

  3. Published

    Bioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines

    Coscolín, C., Katzke, N., Garcia-Moyano, A., Navarro-Fernández, J., Almendral, D., Martinez-Martinez, M., Bollinger, A., Bargiela, R., Gerler, C., Chernikova, T. N., Rojo, D., Barbas, C., Tran, H., Golyshina, O. V., Koch, R., Yakimov, M. M., Bjerga, G. E. K., Golyshin, P. N., Jaeger, K-E. & Ferrer, M., 9 Jan 2019, In : Applied and Environmental Microbiology. 85, 2, e02404-18.

    Research output: Contribution to journalArticle

  4. Published

    Cuniculiplasmataceae, their ecogenomic and metabolic patterns and interactions with ‘ARMAN’

    Golyshina, O. V., Bargiela, R. & Golyshin, P. N., Jan 2019, In : Extremophiles. 23, 1, p. 1-7 7 p.

    Research output: Contribution to journalArticle

  5. Published

    Decoding the ocean's microbiological secrets for marine enzyme biodiscovery

    Ferrer, M., Mendez-Garcia, C., Bargiela, R., Chow, J., Alonso, S., Garcia-Moyano, A., Bjerga, G. E. K., Steen, I. H., Schwabe, T., Blom, C., Vester, J., Weckbecker, A., Shahgaldian, P., de Carvalho, C. C. C. R., Meskys, R., Zanaroli, G., Gloeckner, F. O., Fernandez-Guerra, A., Thambisetty, S., de la Calle, F., Golyshina V, O., Yakimov, M. M., Jaeger, K-E., Yakunin, A. F., Streit, W. R., McMeel, O., Calewaert, J-B., Tonne, N., Golyshin, P. N. & Consortium, INMARE., 1 Jan 2019, In : FEMS Microbiology Letters. 366, 1, fny285.

    Research output: Contribution to journalArticle

  6. Published

    Diversity of “Ca. Micrarchaeota” in two distinct types of acidic environments and their associations with Thermoplasmatales

    Golyshina, O., Bargiela, R., Toshchakov, S. V., Chernyh, N. A., Ramayah, S., Korzhenkov, A. A., Kublanov, I. V. & Golyshin, P., 15 Jun 2019, In : Genes. 10, 6, 461.

    Research output: Contribution to journalArticle

  7. Published

    Genetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis

    Alonso, S., Santiago, G., Cea-Rama, I., Fernandez-Lopez, L., Coscolín, C., Modregger, J., Ressmann, A. K., Martinez-Martinez, M., Marrero, H., Bargiela, R., Pita, M., Gonzalez-Alfonso, J. L., Briand, M. L., Rojo, D., Barbas, C., Plou, F. J., Golyshin, P., Shahgaldian, P., Sanz-Aparicio, J., Guallar, V. & Ferrer, M., Mar 2020, In : Nature Catalysis. 3, 3, p. 319-328

    Research output: Contribution to journalArticle

  8. Published

    High representation of archaea across all depths in oxic and low-pH sediment layers underlying an acidic stream

    Distaso, M., Bargiela, R., Brailsford, F., Williams, G., Wright, S., Lunev, E. A., Toshchakov, S. V., Yakimov, M. M., Jones, D. L., Golyshin, P. & Golyshina, O., 17 Nov 2020, In : Frontiers in Microbiology. 11, p. 576520

    Research output: Contribution to journalArticle

  9. Published

    Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata

    Chernikova, T., Bargiela, R., Toshchakov, S. V., Shivaraman, V., Lunev, E. A., Yakimov, M. M., Thomas, D. N. & Golyshin, P., 28 Oct 2020, In : Frontiers in Microbiology. 11, 572931.

    Research output: Contribution to journalArticle

  10. Published

    Microbial Communities of Polymetallic Deposits’ Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts

    Gavrilov, S. N., Korzhenkov, A. A., Kublanov, I. V., Bargiela, R., Zamana, L. V., Toshchakov, S. V., Golyshin, P. & Golyshina, O., 17 Jul 2019, In : Frontiers in Microbiology.

    Research output: Contribution to journalArticle

  11. Published

    Proteome cold-shock response in the extremely acidophilic archaeon, Cuniculiplasma divulgatum

    Bargiela, R., Lanthaler, K., Potter, C., Ferrer, M., Yakunin, A., Paizs, B., Golyshin, P. & Golyshina, O., 19 May 2020, In : Microorganisms . 8, 5

    Research output: Contribution to journalArticle

  12. Published

    Structure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase

    Cea-Rama, I., Coscolín, C., Katsonis, P., Bargiela, R., Golyshin, P., Lichtarge, O., Ferrer, M. & Sanz-Aparicio, J., 2021, In : Computational and Structural Biotechnology Journal. 19, p. 2307-2317 11 p.

    Research output: Contribution to journalArticle

  13. Published

    Utilization of low-molecular-weight organic compounds by the filterable fraction of a lotic microbiome

    Ghuneim, L. A., Distaso, M., Chernikova, T., Bargiela, R., Lunev, E. A., Korzhenkov, A. A., Toshchakov, S. V., Rojo, D., Barbas, C., Ferrer, M., Golyshina, O., Golyshin, P. & Jones, D. L., 1 Feb 2021, In : Fems Microbiology Ecology. 97, 2

    Research output: Contribution to journalArticle