Dr Tatyana Chernikova

Swyddog Ymchwil

  1. Cyhoeddwyd

    Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

    Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Maw 2017, Yn: Scientific Reports. 7, 44103, 44103.

    Allbwn ymchwil: Cyfraniad at gyfnodolynErthygladolygiad gan gymheiriaid

  2. Cyhoeddwyd

    Aerobic Hydrocarbon-Degrading Gammaproteobacteria: Oleiphilaceae and Relatives

    Golyshin, P., Jaeger, K-E., Toshchakov, S. V., Golyshina, O., Chernikova, T., Yakimov, M. M. & Ferrer, M., 27 Tach 2019, Handbook of Hydrocarbon and Lipid Microbiology Series. Taxonomy, Genomics and Ecophysiology of Hydrocarbon-Degrading Microbes. McGenity, T. J. (gol.). Springer, t. 153-166

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  3. Cyhoeddwyd

    Alcalilimnicola halodurans gen. nov., sp nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.

    Yakimov, M. M., Giuliano, L., Chernikova, T. N., Gentile, G., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Tach 2001, Yn: International Journal of Systematic and Evolutionary Microbiology. 51, 6, t. 2133-2143

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  4. Cyhoeddwyd

    Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature

    Bargiela, R., Mapelli, F., Rojo, D., Chouaia, B., Tornés, J., Borin, S., Richter, M., Del Pozo, M. V., Cappello, S., Gertler, C., Genovese, M., Denaro, R., Martínez-Martínez, M., Fodelianakis, S., Amer, R. A., Bigazzi, D., Han, X., Chen, J., Chernikova, T. N., Golyshina, O. V., Mahjoubi, M., Jaouanil, A., Benzha, F., Magagnini, M., Hussein, E., Al-Horani, F., Cherif. A., N. V., Blaghen, M., Abdel-Fattah, Y. R., Kalogerakis, N., Barbas, C., Malkawi, H. I., Golyshin, P. N., Yakimov, M. M., Daffonchio, D. & Ferrer, M., 29 Meh 2015, Yn: Scientific Reports. 5, t. Article Number 11651

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  5. Cyhoeddwyd

    Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.

    Ferrer, M., Beloqui, A., Golyshina, O. V., Plou, F. J., Neef, A., Chernikova, T. N., Fernandez-Arrojo, L., Ghazi, I., Ballesteros, A., Elborough, K., Timmis, K. N. & Golyshin, P. N., 1 Ion 2007, Yn: Biotechnology Journal. 2, 2, t. 207-213

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  6. Cyhoeddwyd

    Bioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines

    Coscolín, C., Katzke, N., Garcia-Moyano, A., Navarro-Fernández, J., Almendral, D., Martinez-Martinez, M., Bollinger, A., Bargiela, R., Gerler, C., Chernikova, T. N., Rojo, D., Barbas, C., Tran, H., Golyshina, O. V., Koch, R., Yakimov, M. M., Bjerga, G. E. K., Golyshin, P. N., Jaeger, K-E. & Ferrer, M., 9 Ion 2019, Yn: Applied and Environmental Microbiology. 85, 2, e02404-18.

    Allbwn ymchwil: Cyfraniad at gyfnodolynErthygladolygiad gan gymheiriaid

  7. Cyhoeddwyd

    Cellulases from rumen.

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C., Timmis, K. N., Elborough, K. & Jarvis, G., 4 Ion 2006, Rhif y patent EP1765999. International Patent Application WO 2006/00375 European Patent PCT/EP2005/053104.

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  8. Cyhoeddwyd

    Chaperonins govern growth of Escherichia coli at low temperatures.

    Ferrer, M., Chernikova, T. N., Yakimov, M. M., Golyshin, P. N. & Timmis, K. N., 1 Tach 2003, Yn: Nature Biotechnology. 21, 11, t. 1266-1267

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  9. Cyhoeddwyd

    Determinants and prediction of esterase substrate promiscuity patterns

    Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, Yn: ACS Chemical Biology. 13, 1, t. 225-234

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  10. Cyhoeddwyd

    Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase

    Placido, A., Hai, T., Ferrer, M., Chernikova, T. N., Distaso, M. A., Armstrong, D., Yakunin, A. F., Toshchakov, S. V., Yakimov, M. M., Kublanov, I. V., Golyshina, O., Pesole, G., Ceci, L. R. & Golyshin, P., 1 Rhag 2015, Yn: Applied Microbiology and Biotechnology. 99, 23, t. 10031-10046

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  11. Cyhoeddwyd

    Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes

    Marasco, R., Fusi, M., Coscolín, C., Borozzi, A., Almendral, D., Bargiela, R., Gohlke neé Nutschel, C., Dittrich, J., Gohlke, H., Matesanz, R., Sanchez-Carrillo, S., Mapelli, F., Chernikova, T., Golyshin, P., Ferrer, M. & Daffonchio, D., 24 Chwef 2023, Yn: Nature Communications. 14, 1, 1045.

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  12. Cyhoeddwyd

    Expression of a temperature-sensitive esterase in anovel chaperone-based Escherichia coli strain.

    Ferrer, M., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Awst 2004, Yn: Applied and Environmental Microbiology. 70, 8, t. 4499-4504

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  13. Cyhoeddwyd

    Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen

    Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Meh 2012, Yn: PLoS ONE. 7, 6, t. e38134

    Allbwn ymchwil: Cyfraniad at gyfnodolynErthygladolygiad gan gymheiriaid

  14. Cyhoeddwyd

    Functional consequences of single:double ring transitions in chaperonins: life in the cold.

    Ferrer, M., Lunsdorf, H., Chernikova, T. N., Yakimov, M., Timmis, K. N. & Golyshin, P. N., 1 Gorff 2004, Yn: Molecular Microbiology. 53, 1, t. 167-182

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  15. Cyhoeddwyd

    Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)

    Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Ebr 2013, Yn: Genome Announcements. 1, 2, t. e00141-13

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  16. Cyhoeddwyd

    Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

    Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Gorff 2013, Yn: Nature Communications. 4, t. 2156

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  17. Cyhoeddwyd

    Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.

    Golyshin, P. N., Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lunsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Puhler, A. & Timmis, K. N., 19 Rhag 2003, Yn: Journal of Biotechnology. 106, 2-3, t. 215-220

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  18. Cyhoeddwyd

    Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.

    Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Gorff 2006, Yn: Nature Biotechnology. 24, 8, t. 997-1004 8 t.

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  19. Cyhoeddwyd

    Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata

    Chernikova, T., Bargiela, R., Toshchakov, S. V., Shivaraman, V., Lunev, E. A., Yakimov, M. M., Thomas, D. N. & Golyshin, P., 28 Hyd 2020, Yn: Frontiers in Microbiology. 11, 572931.

    Allbwn ymchwil: Cyfraniad at gyfnodolynErthygladolygiad gan gymheiriaid

  20. Cyhoeddwyd

    Hydrocarbon-Degrading Microbes as Sources of New Biocatalysts

    Coscolín, C., Bargiela, R., Martinez-Martinez, M., Alonso, S., Bollinger, A., Thies, S., Chernikova, T., Hai, T., Golyshina, O., Jaeger, K-E., Yakimov, M. M., Golyshin, P. & Ferrer, M., 27 Tach 2019, Handbook of Hydrocarbon and Lipid Microbiology Series. Taxonomy, Genomics and Ecophysiology of Hydrocarbon-Degrading Microbes. McGenity, T. J. (gol.). Springer, t. 1-21

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  21. Cyhoeddwyd

    Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data

    Bourguignon, N., Bargiela, R., Rojo, D., Chernikova, T., Lopez de Rodas, S. A., Garcia-Cantalejo, J., Nather, D. J., Golyshin, P., Barbas, C., Ferrero, M. & Ferrer, M., 1 Rhag 2016, Yn: World Journal of Microbiology and Biotechnology. 32, 201

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  22. Cyhoeddwyd

    Metagenomics as a tool for enzyme discovery: hydrolytic enzymes from marine-related metagenomes

    Popovic, A., Tchigvintsev, A., Tran, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Golyshin, P. N. & Yakunin, A. F., 2015, Prokaryotic Systems Biology. Springer, t. 1-20 20 t.

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  23. Cyhoeddwyd

    Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

    Bargiela, R., Herbst, F. A., Martinez-Martinez, M., Seifert, J., Rojo, D., Cappello, S., Genovese, M., Crisafi, F., Denaro, R., Chernikova, T. N., Barbas, C., von Bergen, M., Yakimov, M. M., Ferrer, M. & Golyshin, P. N., 27 Awst 2015, Yn: Proteomics. 15, 20, t. 3508-3520

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  24. Cyhoeddwyd

    Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)

    Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Mai 2002, Yn: Environmental Microbiology. 4, 5, t. 249-256

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  25. Cyhoeddwyd

    Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin.

    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Dos Santos, V. A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Awst 2005, Yn: Chemistry and Biology. 12, 8, t. 895-904

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