AVOTREX: A Global Dataset of Extinct Birds and Their Traits

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  • AVOTREX a global dataset of extinct birds and their traits

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    Embargo yn dod i ben: 24/10/25

Dangosydd eitem ddigidol (DOI)

  • Ferran Sayol
    Centre for Ecological Research and Forestry Applications (CREAF)
  • Joseph P. Wayman
    School of Sport and Exercise Sciences, University of Birmingham
  • Paul Dufour
    University of Montpellier
  • Thomas E. Martin
  • Julian P. Hume
    Natural History Museum, Tring
  • Maria Wagner Jørgensen
    School of Sport and Exercise Sciences, University of Birmingham
  • Natàlia Martínez-Rubio
    Centre for Ecological Research and Forestry Applications (CREAF)
  • Ariadna Sanglas
    Centre for Ecological Research and Forestry Applications (CREAF)
  • Filipa C. Soares
    Muséum national d’Histoire naturelle, UMR 7205 CNRS Institut de Systématique, Evolution et Biodiversité, 25 rue Cuvier, CP 30, 75005 Paris, France
  • Rob Cooke
    Centre for Ecology and Hydrology, Wallingford, UK
  • Chase D. Mendenhall
    Slippery Rock University
  • Jay R. Margolis
    Virginia Tech, Blacksburg
  • Juan Carlos Illera
    University of Oviedo
  • Rhys Lemoine
    University of Gothenburg
  • Eva Benavides
    School of Sport and Exercise Sciences, University of Birmingham
  • Oriol Lapiedra
    Centre for Ecological Research and Forestry Applications (CREAF)
  • Kostas A. Triantis
    National and Kapodistrian University of Athens
  • Alex L. Pigot
    University College London
  • Joseph A. Tobias
    Grand Challenges in Ecosystem and the Environment Initiative, Imperial College London, Silwood Park Campus, Ascot, Berkshire SL5 7PY, UK alexander.papadopulos@plants.ox.ac.uk.
  • Søren Faurby
    University of Gothenburg
  • Thomas J. Matthews
    School of Sport and Exercise Sciences, University of Birmingham
ABSTRACT Motivation Human activities have been reshaping the natural world for tens of thousands of years, leading to the extinction of hundreds of bird species. Past research has provided evidence of extinction selectivity towards certain groups of species, but trait information is lacking for the majority of clades, especially for prehistoric extinctions identified only through subfossil remains. This incomplete knowledge potentially obscures the structure of natural communities, undermining our ability to infer changes in biodiversity across space and time, including trends in functional and phylogenetic diversity. Biases in currently available trait data also limit our ability to identify drivers and processes of extinction. Here we present AVOTREX, an open-access database of species traits for all birds known to have gone extinct in the last 130,000?years. This database provides detailed morphological information for 610 extinct species, along with a pipeline to build phylogenetic trees that include these extinct species. Main Types of Variables Contained For each extinct bird species, we provide information on the taxonomy, geographic location, and period of extinction. We also present data on island endemicity, flight ability, and body mass, as well as standard measurements of external (matching the AVONET database of extant birds) and skeletal morphology from museum specimens where available. To ensure comprehensive morphological data coverage, we estimate all missing morphological measurements using a data imputation technique based on machine learning. Finally, we provide an R package to graft all extinct species onto a global phylogeny of extant species (BirdTree). Spatial Location and Grain Global. Time Period and Grain All known globally extinct bird species from 130,000?years ago up until 2024. Major Taxa and Level of Measurement Birds (Class Aves), species level. Software Format Spreadsheets (.csv) stored in Dryad.

Allweddeiriau

Iaith wreiddiolSaesneg
Tudalennau (o-i)e13927
CyfnodolynGlobal Ecology and Biogeography
Cyfrol33
Rhif y cyfnodolyn12
Dyddiad ar-lein cynnar24 Hyd 2024
Dynodwyr Gwrthrych Digidol (DOIs)
StatwsCyhoeddwyd - Rhag 2024
Gweld graff cysylltiadau