1. Review article › Research › Peer-reviewed
2. Published

   Dissimilatory reduction of sulfate and zero-valent sulfur at low pH and its significance for bioremediation and metal recovery

   Johnson, D. B. & Sánchez-Andrea, I., 10 Oct 2019, In: Advances in Microbial Physiology. 75, p. 205-231 27 p.

   Research output: Contribution to journal › Review article › peer-review

3. Published

   Microbiomes in extremely acidic environments: functionalities and interactions that allow survival and growth of prokaryotes at low pH

   Quatrini, R. & Johnson, D. B., Jun 2018, In: Current Opinion in Microbiology. 43, p. 139-147 9 p.

   Research output: Contribution to journal › Review article › peer-review

4. Published

   The iron-oxidizing proteobacteria

   Hedrich, S., Schlömann, M. & Johnson, D. B., Jun 2011, In: Microbiology - SGM. 157, Pt 6, p. 1551-1564 14 p.

   Research output: Contribution to journal › Review article › peer-review

5. Web publication/site › Research
6. Published

   Ecology and biodiversity of extremely acidophilic microorganisms.

   Rawlings, D. E. & Johnson, D. B., 1 Jan 2002

   Research output: Non-textual form › Web publication/site

7. Book › Research › Peer-reviewed
8. Published

   Acidophiles: Life in Extremely Acidic Environments

   Quatrini, R. (ed.) & Johnson, B., 2016, Caister Academic Press Limited. 324 p.

   Research output: Book/Report › Book › peer-review

9. Published

   Recent Advances in Acidophile Microbiology: Fundamentals and Applications

   Johnson, D. B. (ed.) & Schippers, A. (ed.), 14 Mar 2017, Frontiers Media.

   Research output: Book/Report › Book › peer-review

10. Book › Research › Not peer-reviewed
11. Published

    Biomining

    Rawlings, D. E. (ed.) & Johnson, D. B. (ed.), 1 Jan 2006, 2006 ed. Springer Verlag.

    Research output: Book/Report › Book

12. Published

    Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. (ed.) & Schippers, A. (ed.), 19 Jan 2017, Frontiers Media. 155 p.

    Research output: Book/Report › Book

13. Poster › Research › Peer-reviewed
14. Published

    BIOMOre – An alternative mining concept

    Pakostova, E. & Johnson, D. B., Jun 2016.

    Research output: Contribution to conference › Poster › peer-review

15. Paper › Research › Peer-reviewed
16. Published

    Development and application of acidophilic sulfidogenic bioreactors for combined pH amelioration, sulfate removal and selective recovery of metals from acidic waste-waters

    Santos, A. L., Barata Holanda, R., Hedrich, S., Nancucheo, I., Falagan Rodriguez, C., Grail, B. & Johnson, D. B., 2015.

    Research output: Contribution to conference › Paper › peer-review

17. Published

    Indirect bioleaching of sulfidic ores and its importance for the development of in situ processing of deep-buried base metal deposits

    Pakostova, E., Grail, B. & Johnson, D. B., Oct 2015.

    Research output: Contribution to conference › Paper › peer-review

18. Published

    Oxidative and reductive bioprocessing of cobalt-containing ores and biomineralisation of cobaltiferous leachates

    Smith, S., Grail, B. & Johnson, D. B., Oct 2015.

    Research output: Contribution to conference › Paper › peer-review

19. Published

    Redox Transformations of Iron and Other Transition Metals by Acidophilic Bacteria

    Johnson, D. B., Aug 2015.

    Research output: Contribution to conference › Paper › peer-review

20. Published

    Redox transformations in sulfur and transition metals at low pH and how these impact metal extraction biotechnologies

    Johnson, D. B., Nov 2015.

    Research output: Contribution to conference › Paper › peer-review

21. Paper › Research › Not peer-reviewed
22. Published

    A novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams.

    Rowe, O. F., Hallberg, K. B., Kimura, S. & Johnson, D. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

23. Published

    Analysis of the microbial composition of macroscopic “streamer” growths in acid mine drainage using a combination of terminal restriction enzyme fragment length polymorphism and fluorescent in situ hybridisation.

    Coupland, K., Kimura, S., Hallberg, K. B. & Johnson, D. B., 1 Jan 2003.

    Research output: Contribution to conference › Paper

24. Published

    Aromatic compound catabolism by a novel acidophilic bacterium.

    Hallberg, K. B., Johnson, D. B. & Williams, P. A., 1 Jan 2001, p. 37.

    Research output: Contribution to conference › Paper

25. Published

    Aromatic compound degradation by novel acidophilic bacteria with potential use for the treatment of waste-water containing organic and inorganic pollutants

    Hallberg, K. B., Williams, P. A. & Johnson, D. B., 1 Jan 2001, p. 28.

    Research output: Contribution to conference › Paper

26. Published

    Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, as revealed by a combination of cultivation-based and cultivation-independent techniques.

    Johnson, D. B., Kimura, S., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 139.

    Research output: Contribution to conference › Paper

27. Published

    Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, elucidated using a combined cultivation-based and cultivation-independent approaches.

    Kimura, S., Hallberg, K. B., Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, p. 687-696.

    Research output: Contribution to conference › Paper

28. Published

    Biohydrometallurgy and the environment: intimate and important associations.

    Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, p. liii-lxvii.

    Research output: Contribution to conference › Paper

29. Published

    Bioleaching of pyrite by defined mixed populations of moderately thermophilic acidophiles in pH-controlled bioreactors.

    Okibe, N., Johnson, D. B., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 165-173.

    Research output: Contribution to conference › Paper

30. Published

    Biotechnological potential of pure cultures and consortia of acidophilic microorganisms.

    Johnson, D. B., Kim, D. J. (ed.), Kim, S. D. (ed.), Lee, J. C. (ed.) & Avraamides, J. (ed.), 1 Jan 2004, p. 107-133.

    Research output: Contribution to conference › Paper

31. Published

    Composition of biofilm communities in acidic mine waters as revealed by combined cultivation and biomolecular approaches.

    Kimura, S., Coupland, K., Hallberg, K. B., Johnson, D. B., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1057-1065.

    Research output: Contribution to conference › Paper

32. Published

    Development and application of bioprocessing technologies in the metal mining industry

    Johnson, D. B., 1 Aug 2012.

    Research output: Contribution to conference › Paper

33. Published

    Dissimilatory reduction of sulfate in extremely acidic environments is carried out by novel sulfidogenic bacteria in syntrophic consortia.

    Johnson, D. B., Rowe, O. F., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 36.

    Research output: Contribution to conference › Paper

34. Published

    Importance of microbial ecology in the development of sustainable technologies for mineral processing and wastewater treatment.

    Johnson, D. B., 1 Jan 2003, p. 1-17.

    Research output: Contribution to conference › Paper

35. Published

    Microbial diversity and genetic response to stress conditions of extremophilic bacteria isolated from the Escondida copper mine.

    Galleguillos, P. A., Hallberg, K. B., Johnson, D. B., Donati, E. R. (ed.), Viera, M. R. (ed.), Tavani, E. L. (ed.), Giaveno, M. A. (ed.), Lavalle, T. L. (ed.) & Chiacchiarini, P. A. (ed.), 1 Jan 2009, p. 55-58.

    Research output: Contribution to conference › Paper

36. Published

    Microbial ecology and biogeochemical cycling of metals in experimental wetland mesocosms.

    Coupland, K., Hallberg, K. B. & Johnson, D. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

37. Published

    Microbial populations in surface spoil at the abandoned Mynydd Parys copper mines.

    Bryan, C. G., Hallberg, K. B., Johnson, D. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 107-112.

    Research output: Contribution to conference › Paper

38. Published

    Microbial populations of mineral spoils and their potential role in biomining.

    Bryan, C. B., Johnson, D. B. & Hallberg, K. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

39. Published

    Microbially-mediated dissolution and synthesis of minerals in extremely acidic environments

    Johnson, D. B., 20 Apr 2012.

    Research output: Contribution to conference › Paper

40. Published

    Mines, microbes and micro-organisms – a case of going around in cycles.

    Johnson, D. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

41. Published

    On the ecology and physiology of acidophilic sulfate-reducing and iron-oxidizing bacteria

    Johnson, D. B., 1 Oct 2012.

    Research output: Contribution to conference › Paper

42. Published

    Oxidative dissolution of sulfide minerals by defined mixed populations of moderately thermophilic mmicroorganisms

    Okibe, N. & Johnson, D. B., 1 Jan 2001, p. 39.

    Research output: Contribution to conference › Paper

43. Published

    Physiological and phylogenetic heterogeneity among iron-oxidizing Acidithiobacillus spp., and characteristics of the novel species Acidithiobacillus ferrivorans.

    Hallberg, K. B., Amouric, A., Brochier-Armanet, C., Bonnefoy, V., Johnson, D. B., Donati, E. R. (ed.), Viera, M. R. (ed.), Tavani, E. L. (ed.), Giaveno, M. A. (ed.), Lavalle, T. L. (ed.) & Chiacchiarini, P. A. (ed.), 1 Jan 2009, p. 167-170.

    Research output: Contribution to conference › Paper

44. Published

    Resource recovery from waste waters: Using Biomineralisation for the selective recovery of metals from acid

    Johnson, D. B., 15 Aug 2013.

    Research output: Contribution to conference › Paper

45. Published

    Selective recovery of metals from Maurliden (Sweden) mine water using novel biomineralization technologies

    Hedrich, S. & Johnson, D. B., 19 Jun 2012.

    Research output: Contribution to conference › Paper

46. Published

    Serological studies of acidophilic heterotrophic bacteria: are proteins or LPS its main antigenic components?

    Coto, O., Dziurla, M. A., Johnson, D. B. & Hallberg, K. B., 1 Jan 2001.

    Research output: Contribution to conference › Paper

47. Published

    Sulfate reduction at low pH by mixed cultures of acidophilic bacteria.

    Sen, A. M., Kimura, S., Hallberg, K. B., Johnson, D. B., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1179-1186.

    Research output: Contribution to conference › Paper

48. Published

    Sulfide production and metal removal by mixed populations of bacteria in low pH bioreactors.

    Rowe, O. F., Kimura, S., Hallberg, K. B. & Johnson, D. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

49. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters.

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 1 Jan 2009, p. 693-696.

    Research output: Contribution to conference › Paper

50. Published

    Sulfidogenesis at low pH: a novel approach for bioremediating acid rock drainage and recovering soluble metals.

    Johnson, D. B., Rowe, O. F., Kimura, S. & Hallberg, K. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

51. Published

    Survival of acidophilic bacteria under conditions of substrate depletion that occur during culture storage.

    Johnson, D. B., Bruhn, D. F., Roberto, F. F., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1195-1203.

    Research output: Contribution to conference › Paper

52. Published

    Using bacteria to break and make minerals in acidic liquours: industrial and environmental implications

    Johnson, D. B., 19 Jun 2013.

    Research output: Contribution to conference › Paper

53. Conference contribution › Research › Peer-reviewed
54. Published

    Biologically-induced precipitation of aluminium in synthetic acid mine water

    Falagan Rodriguez, C., Johnson, D. B., Sanchez-Espana, J. & Yusta, I., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

55. Published

    Developing Sustainable Biotechnologies for Mine Water Treatment in the 21st Century

    Johnson, B., Santos, A. L., Falagan, C., Jones, R. M., Grail, B. M., Holanda, R. & Hedrich, S., Jul 2016, Procddings IMWA 2016. p. 782-789

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

56. Published

    In situ bioleaching: an alternative approach of metal extraction from deep-buried sulfide ores

    Pakostova, E., Grail, B. & Johnson, D. B., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

57. Published

    Microbial communities in passive remediation systems at three abandoned coal mine sites in the United Kingdom

    Falagan Rodriguez, C., Smail, I., Grail, B. & Johnson, D. B., Jul 2016, Proceedings IMWA 2016 . p. 796-803

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

58. Published

    New approaches for recovering metals from mine wastes

    Falagan Rodriguez, C., Grail, B. & Johnson, D. B., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

59. Published

    New insights into the microbiology of meromictic acidic pit lakes in the Iberian Pyrite Belt (Spain)

    Falagan Rodriguez, C., Sanchez-Espana, J., Yusta, I. & Johnson, D. B., Jul 2016, Proceedings IMWA 2016. p. 192-198

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

60. Published

    Oxidative and reductive bioprocessing of cobalt bearing ores, and recovery of cobalt minerals via biosulfidogenesis

    Smith, S., Grail, B. & Johnson, D. B., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

61. Published

    Remediation of acidic metal-rich waste waters using sulfidogenic bioreactor sustained by algal biomass

    Santos, A. L. & Johnson, D. B., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

62. Published

    The development and future impact on biotechnologies for mineral processing and metal recovery

    Johnson, B., Aug 2019, Proceedings of the 15th Biennial Meeting of the Society of Geology Applied to Mineral Deposits. p. 1516-1619

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

63. Entry for encyclopedia/dictionary › Research › Peer-reviewed
64. Published

    Extremophiles and Acidic Environments

    Johnson, D. B. & Aguilera, A., 2019, Encyclopedia of Microbiology . 4tk ed. p. 206-227

    Research output: Chapter in Book/Report/Conference proceeding › Entry for encyclopedia/dictionary › peer-review

65. Chapter › Research › Peer-reviewed
66. Published

    Acidophile microbiology in space and time

    Johnson, D. B. & Quatrini, R., 2016, Acidophiles: Life in Extremely Acidic Environments. Johnson, D. B. & Quatrini, R. (eds.). Caister Academic Press Limited, p. 3-16

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

67. Published

    Biological removal of sulfurous compounds and metals from inorganic wastewaters

    Johnson, B. & Santos, A. L., Oct 2020, Environmental Technologies to Treat Sulfur Pollution: Principles and Engineering. Lens, P. N. L. (ed.). 2nd ed. IWA Publishing, p. 215-246

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

68. Published

    Microbial communities and interactions in low pH environments

    Johnson, D. B., 2016, Acidophiles: Life in Extremely Acidic Environments. Quatrini, R. & Johnson, D. B. (eds.). Caister Academic Press Limited, p. 121-138

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

69. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 24 Sept 2009, Biohydrometallurgy: a meeting point between microbial ecology,metal recovery processes and environmental remediation. Trans Tech Publications, Vol. 71-73. p. 693-696 (Advanced Materials Research).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

70. Chapter › Research › Not peer-reviewed
71. Published

    Biodiversity of acidophilic moderate thermophiles isolated from two sites in Yellowstone National Park, and their roles in the dissimilatory oxido-reduction of iron.

    Johnson, D. B., Body, D. A., Bridge, T. A., Bruhn, D. F., Roberto, F. F., Reysenbach, A. L. (ed.), Voytek, M. (ed.) & Mancinelli, R. (ed.), 1 Jan 2001, Thermophiles: Biodiversity: Ecology and Evolution. 2001 ed. Kluwer Academic/Plenum Publishers, p. 23-39

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

72. Published

    Bioleaching of pyrite by defined mixed cultures of moderately thermophilic acidophiles.

    Okibe, N., Johnson, D. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 443-451

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

73. Published

    Biological versus abiotic oxidation of iron in acid mine drainage waters: an important role for moderately acidophilic, iron-oxidising bacteria.

    Dennison, F., Johnson, D. B., Sen, A. M., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 493-501

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

74. Published

    Demonstration of sulfide production by mixed populations of bacteria in low pH bioreactors

    Rowe, O. F., Kimura, S., Hallberg, K. B., Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, The 16th International Biohydrometallurgy Symposium: Book of Abstracts. 2005 ed. 16th International Biohydrometallurgy Symposium, p. 257-259

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

75. Published

    Genus II. Leptospirillum

    Johnson, D. B., Boone, D. R. (ed.) & Castenholtz, R. W. (ed.), 1 Jan 2001, Bergey's Manual of Systematic Bacteriology: Archaea and the Deeply Branching and Phototrophic Bacteria v. 1. 2001 ed. Springer, p. 453-457

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

76. Published

    Isolation, enumeration, growth, and preservation of acidophilic prokaryotes.

    Hallberg, K. B., Johnson, D. B., Hurst, C. J. (ed.), Crawford, R. L. (ed.), Garland, J. L. (ed.), Lipson, D. A. (ed.), Mills, A. L. (ed.) & Stetzenbach, L. D. (ed.), 1 Jan 2007, Manual of Environmental Microbiology: 3rd Edition. 2007 ed. American Society for Microbiology, p. 1155-1165

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

77. Published

    Partial characterisation of a colored organic metabolite isolated from cultures of Acidithiobacillus ferrooxidans grown on elemental sulfur.

    Ceskova, P., Zak, Z., Havlis, J., Johnson, D. B., Janiczek, O., Mandl, M., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 363-367

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

78. Published

    Passive mine water treatment at the former Wheal Jane tin mine, Cornwall: important biogeochemical and microbiological lessons

    Hallberg, K. B., Johnson, D. B. & Nuttall, C. A. (ed.), 1 Jan 2002, Mine Water Treatment: a Decade of Progress. 2002 ed. HERO, p. 143-151

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

79. Published

    Passive treatment of acidic mine waters in subsurface-flow systems: exploring RAPS and permeable reactive barriers

    Younger, P. L., Jayaweera, A., Elliot, A., Wood, R., Amos, P., Daugherty, A., Martin, A., Bowden, L., Aplin, A., Johnson, D. B. & Nuttall, C. A. (ed.), 1 Jan 2002, Mine Water Treatment: a Decade of Progress. 2002 ed. HERO, p. 40-50

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

80. Published

    Physiology and ecology of acidophilic microorganisms.

    Johnson, D. B., Gerday, C. (ed.) & Glansdorff, N. (ed.), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

81. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

82. Published

    Techniques for detecting and identifying acidophilic mineral-oxidising microorganisms.

    Johnson, D. B., Hallberg, K. B., Rawlings, D. E. (ed.) & Johnson, D. B. (ed.), 1 Jan 2007, Biomining. 2007 ed. Springer Verlag, p. 237-262

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

83. Published

    The Microbiology of Extremely Acidic Environment

    Johnson, D. B. & Aguilera, A., May 2016, Manual of Environmental Microbiology. Yates, M. V., Nakatsu, C. H., Miller, R. V. & Pillai, S. D. (eds.). 4th ed.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

84. Published

    The effects of pesticides on soil microflora.

    Jones, S. E., Johnson, D. B., Young, J. E. (ed.), Griffin, M. N. (ed.), Alford, D. V. (ed.) & Oglivy, S. E. (ed.), 1 Jan 2002, Reducing Agrochemical Use on the Arable Farm: The Talisman and Scarab Projects.. 2002 ed. Department for Environment, Food & Rural Affairs, p. 255-276

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

85. Published

    The geochemistry of acid mine drainage

    Blowes, D. W., Ptacek, C. J., Jamboor, J. L., Weisner, C. G., Paktunc, D., Gould, W. D. & Johnson, D., 8 Nov 2013, Treatise on Geochemistry . Holland, H. D. & Turekian, K. K. (eds.). 2nd ed. Elsevier Science, Vol. 11. p. 131-190

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

86. Meeting Abstract › Research › Peer-reviewed
87. Published

    Deconstructing and reconstructing microbial communities that promote the natural attenuation of acidic mine waters

    Johnson, B., 2 Apr 2017, In: Abstracts of papers - American Chemical Society. 253

    Research output: Contribution to journal › Meeting Abstract › peer-review

88. Published

    Novel approaches for the selective capture of transition metals from mine waters using low pH sulfur- and sulfate-reducing bioreactors

    Holanda, R., Santos, A. & Johnson, D. B., 2 Apr 2017, In: Abstracts of papers - American Chemical Society. 253

    Research output: Contribution to journal › Meeting Abstract › peer-review

89. Article › Research › Peer-reviewed
90. Published

    "Bioshrouding": a novel approach for securing reactive mineral tailings

    Johnson, D. B., Yajie, L. & Okibe, N., Mar 2008, In: Biotechnology Letters. 30, 3, p. 445-9 5 p.

    Research output: Contribution to journal › Article › peer-review

91. Published

    A Model of Aerobic and Anaerobic Metabolism of Hydrogen in the Extremophile Acidithiobacillus ferrooxidans

    Kucera, J., Lochman, J., Bouchal, P., Pakostova, E., Mikulasek, K., Hedrich, S., Janiczek, O., Mandl, M. & Johnson, D. B., 30 Nov 2020, In: Frontiers in Microbiology. 11, 610836.

    Research output: Contribution to journal › Article › peer-review

92. Published

    A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores

    Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58

    Research output: Contribution to journal › Article › peer-review

93. Published

    A case in support of implementing innovative bio-processes in the metal mining industry

    Sanchez-Andrea, I., Stams, A. J. M., Weijma, J., Gonzalez Contreras, P., Dijkman, H., Rozendal, R. A. & Johnson, D., 18 Apr 2016, In: FEMS Microbiology Letters. 363, 11, fnw106.

    Research output: Contribution to journal › Article › peer-review

94. Published

    A comparative study of the microbiology of soils managed under organic and conventional regimes.

    Shannon, D., Sen, A. M. & Johnson, D. B., 1 Sept 2002, In: Soil Use and Management. 18, Supplement S, p. 274-283

    Research output: Contribution to journal › Article › peer-review

95. Published

    A microbiological survey of Montserrat Island hydrothermal biotopes.

    Atkinson, T., Cairns, S., Cowan, D. A., Danson, M. J., Hough, D. W., Johnson, D. B., Norris, P. R., Raven, N., Robinson, C., Robson, R. & Sharp, R. J., 1 Oct 2000, In: Extremophiles. 4, 5, p. 305-313

    Research output: Contribution to journal › Article › peer-review

96. Published

    A modular continuous flow reactor system for the selective bio-oxidation of iron and precipitation of schwertmannite from mine-impacted waters

    Hedrich, S. & Johnson, D. B., 1 Feb 2012, In: Bioresource Technology. 106, p. 44-49

    Research output: Contribution to journal › Article › peer-review

97. Published

    Acid mine drainage remediation options: a review

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 3-14

    Research output: Contribution to journal › Article › peer-review

98. Published

    Acidibacter ferrireducens gen. nov., sp. nov.: an acidophilic ferric iron-reducing gammaproteobacterium

    Falagan, C. & Johnson, D. B., 13 Aug 2014, In: Extremophiles. 18, 6, p. 1067-1073

    Research output: Contribution to journal › Article › peer-review

99. Published

    Acidicapsa ferrireducens sp nov., Acidicapsa acidiphila sp nov., and Granulicella acidiphila sp nov.: novel acidobacteria isolated from metal-rich acidic waters

    Falagan, C., Foesel, B. & Johnson, B., May 2017, In: Extremophiles. 21, 3, p. 459-469

    Research output: Contribution to journal › Article › peer-review

100. Published

     Acidiferrobacter thiooxydans, gen. nov. sp. nov.; an acidophilic, thermo-tolerant, facultatively anaerobic iron- and sulfur-oxidizer of the family Ectothiorhodospiraceae

     Hallberg, K. B., Hedrich, S. & Johnson, D. B., 11 Feb 2011, In: Extremophiles. 15, 2, p. 271-9 9 p.

     Research output: Contribution to journal › Article › peer-review

101. Published

     Acidithiobacillus ferrianus sp. nov. an ancestral extremely acidophilic and facultatively anaerobic chemolithoautotroph

     Norris, P. R., Falagán, C., Moya-Beltrán, A., Castro, M., Quatrini, R. & Johnson, D. B., Mar 2020, In: Extremophiles. 24, 2, p. 329-337 9 p.

     Research output: Contribution to journal › Article › peer-review

102. Published

     Acidithiobacillus ferridurans, sp. nov.; an acidophilic iron- , sulfur- and hydrogen-metabolizing chemolithotrophic Gammaproteobacterium

     Hedrich, S. & Johnson, D. B., 24 May 2013, In: International Journal of Systematic Evolutionary Microbiology.

     Research output: Contribution to journal › Article › peer-review

103. Published

     Acidithiobacillus ferriphilus sp. nov.: a facultatively anaerobic iron- and sulfur-metabolising extreme acidophile

     Falagan, C. & Johnson, D. B., 1 Jan 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 1, p. 206-211

     Research output: Contribution to journal › Article › peer-review

104. Published

     Acidithiobacillus ferrivorans, sp nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments.

     Hallberg, K. B., Gonzalez-Toril, E. & Johnson, D. B., 1 Oct 2010, In: Extremophiles. 14, 1, p. 9-19

     Research output: Contribution to journal › Article › peer-review

105. Published

     Acidithiobacillus ferrooxidans

     Quatrini, R. & Johnson, D. B., 1 Mar 2019, In: Trends in Microbiology. 27, 3, p. 282-283 2 p.

     Research output: Contribution to journal › Article › peer-review

106. Published

     Acidithiobacillus sulfuriphilus sp. nov. an extremely acidophilic sulfur-oxidizing chemolithotroph isolated from a neutral pH environment

     Falagán, C., Moya-Beltrán, A., Castro, M., Quatrini, R. & Johnson, D. B., 1 Sept 2019, In: International Journal of Systematic Evolutionary Microbiology. 69, 9, p. 2907-2913 7 p.

     Research output: Contribution to journal › Article › peer-review

107. Published

     Acidithrix ferrooxidans gen. nov., sp. nov.; a filamentous and obligately heterotrophic, acidophilic member of the Actinobacteria that catalyzes dissimilatory oxido-reduction of iron

     Jones, R. M. & Johnson, D. B., 29 Jan 2015, In: Research in Microbiology. 166, 2, p. 111-120

     Research output: Contribution to journal › Article › peer-review

108. Published

     Acidocella aromatica sp. nov.: an acidophilic heterotrophic alphaproteobacterium with unusual phenotypic traits

     Jones, R. M., Hedrich, S. & Johnson, D. B., 1 Sept 2013, In: Extremophiles. 17, 5, p. 841-850

     Research output: Contribution to journal › Article › peer-review

109. Published

     Acidophile Microbiology in Space and Time

     Johnson, D. B. & Quatrini, R., 21 Feb 2020, In: Current issues in molecular biology. 39, p. 63-76 14 p.

     Research output: Contribution to journal › Article › peer-review

110. Published

     Acidophilic algae isolated from mine-impacted environments and their roles in sustaining heterotrophic acidophiles

     Ňancucheo, I. & Johnson, D. B., 11 Sept 2012, In: Fontiers in Microbiology. 3, p. 325

     Research output: Contribution to journal › Article › peer-review

111. Published

     Aerobic and anaerobic oxidation of hydrogen by acidophilic bacteria

     Hedrich, S. & Johnson, D. B., 1 Dec 2013, In: FEMS Microbiology Letters. 349, 1, p. 40-45

     Research output: Contribution to journal › Article › peer-review

112. Published

     Anaerobic Sulfur Metabolism Coupled to Dissimilatory Iron Reduction in the Extremophile Acidithiobacillus ferrooxidans

     Osorio, H., Mangold, S., Denis, Y., Ñancucheo, I., Esparza, M., Johnson, D. B., Bonnefoy, V., Dopson, M. & Holmes, D. S., 1 Apr 2013, In: Applied and Environmental Microbiology. 79, 7, p. 2172-2181

     Research output: Contribution to journal › Article › peer-review

113. Published

     Approaches for Eliminating Bacteria Introduced during In Situ Bioleaching of Fractured Sulfidic Ores in Deep Subsurface

     Ballerstedt, H., Pakostova, E., Johnson, D. B. & Schippers, A., Aug 2017, In: Solid State Phenomena. 262, p. 70-74

     Research output: Contribution to journal › Article › peer-review