1. Article › Research › Peer-reviewed
2. Published

   "Bioshrouding": a novel approach for securing reactive mineral tailings

   Johnson, D. B., Yajie, L. & Okibe, N., Mar 2008, In: Biotechnology Letters. 30, 3, p. 445-9 5 p.

   Research output: Contribution to journal › Article › peer-review

3. Published

   A Model of Aerobic and Anaerobic Metabolism of Hydrogen in the Extremophile Acidithiobacillus ferrooxidans

   Kucera, J., Lochman, J., Bouchal, P., Pakostova, E., Mikulasek, K., Hedrich, S., Janiczek, O., Mandl, M. & Johnson, D. B., 30 Nov 2020, In: Frontiers in Microbiology. 11, 610836.

   Research output: Contribution to journal › Article › peer-review

4. Published

   A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores

   Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58

   Research output: Contribution to journal › Article › peer-review

5. Published

   A case in support of implementing innovative bio-processes in the metal mining industry

   Sanchez-Andrea, I., Stams, A. J. M., Weijma, J., Gonzalez Contreras, P., Dijkman, H., Rozendal, R. A. & Johnson, D., 18 Apr 2016, In: FEMS Microbiology Letters. 363, 11, fnw106.

   Research output: Contribution to journal › Article › peer-review

6. Published

   A comparative study of the microbiology of soils managed under organic and conventional regimes.

   Shannon, D., Sen, A. M. & Johnson, D. B., 1 Sept 2002, In: Soil Use and Management. 18, Supplement S, p. 274-283

   Research output: Contribution to journal › Article › peer-review

7. Published

   A microbiological survey of Montserrat Island hydrothermal biotopes.

   Atkinson, T., Cairns, S., Cowan, D. A., Danson, M. J., Hough, D. W., Johnson, D. B., Norris, P. R., Raven, N., Robinson, C., Robson, R. & Sharp, R. J., 1 Oct 2000, In: Extremophiles. 4, 5, p. 305-313

   Research output: Contribution to journal › Article › peer-review

8. Published

   A modular continuous flow reactor system for the selective bio-oxidation of iron and precipitation of schwertmannite from mine-impacted waters

   Hedrich, S. & Johnson, D. B., 1 Feb 2012, In: Bioresource Technology. 106, p. 44-49

   Research output: Contribution to journal › Article › peer-review

9. Published

   Acid mine drainage remediation options: a review

   Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 3-14

   Research output: Contribution to journal › Article › peer-review

10. Published

    Acidibacter ferrireducens gen. nov., sp. nov.: an acidophilic ferric iron-reducing gammaproteobacterium

    Falagan, C. & Johnson, D. B., 13 Aug 2014, In: Extremophiles. 18, 6, p. 1067-1073

    Research output: Contribution to journal › Article › peer-review

11. Published

    Acidicapsa ferrireducens sp nov., Acidicapsa acidiphila sp nov., and Granulicella acidiphila sp nov.: novel acidobacteria isolated from metal-rich acidic waters

    Falagan, C., Foesel, B. & Johnson, B., May 2017, In: Extremophiles. 21, 3, p. 459-469

    Research output: Contribution to journal › Article › peer-review

12. Published

    Acidiferrobacter thiooxydans, gen. nov. sp. nov.; an acidophilic, thermo-tolerant, facultatively anaerobic iron- and sulfur-oxidizer of the family Ectothiorhodospiraceae

    Hallberg, K. B., Hedrich, S. & Johnson, D. B., 11 Feb 2011, In: Extremophiles. 15, 2, p. 271-9 9 p.

    Research output: Contribution to journal › Article › peer-review

13. Published

    Acidithiobacillus ferrianus sp. nov. an ancestral extremely acidophilic and facultatively anaerobic chemolithoautotroph

    Norris, P. R., Falagán, C., Moya-Beltrán, A., Castro, M., Quatrini, R. & Johnson, D. B., Mar 2020, In: Extremophiles. 24, 2, p. 329-337 9 p.

    Research output: Contribution to journal › Article › peer-review

14. Published

    Acidithiobacillus ferridurans, sp. nov.; an acidophilic iron- , sulfur- and hydrogen-metabolizing chemolithotrophic Gammaproteobacterium

    Hedrich, S. & Johnson, D. B., 24 May 2013, In: International Journal of Systematic Evolutionary Microbiology.

    Research output: Contribution to journal › Article › peer-review

15. Published

    Acidithiobacillus ferriphilus sp. nov.: a facultatively anaerobic iron- and sulfur-metabolising extreme acidophile

    Falagan, C. & Johnson, D. B., 1 Jan 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 1, p. 206-211

    Research output: Contribution to journal › Article › peer-review

16. Published

    Acidithiobacillus ferrivorans, sp nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments.

    Hallberg, K. B., Gonzalez-Toril, E. & Johnson, D. B., 1 Oct 2010, In: Extremophiles. 14, 1, p. 9-19

    Research output: Contribution to journal › Article › peer-review

17. Published

    Acidithiobacillus ferrooxidans

    Quatrini, R. & Johnson, D. B., 1 Mar 2019, In: Trends in Microbiology. 27, 3, p. 282-283 2 p.

    Research output: Contribution to journal › Article › peer-review

18. Published

    Acidithiobacillus sulfuriphilus sp. nov. an extremely acidophilic sulfur-oxidizing chemolithotroph isolated from a neutral pH environment

    Falagán, C., Moya-Beltrán, A., Castro, M., Quatrini, R. & Johnson, D. B., 1 Sept 2019, In: International Journal of Systematic Evolutionary Microbiology. 69, 9, p. 2907-2913 7 p.

    Research output: Contribution to journal › Article › peer-review

19. Published

    Acidithrix ferrooxidans gen. nov., sp. nov.; a filamentous and obligately heterotrophic, acidophilic member of the Actinobacteria that catalyzes dissimilatory oxido-reduction of iron

    Jones, R. M. & Johnson, D. B., 29 Jan 2015, In: Research in Microbiology. 166, 2, p. 111-120

    Research output: Contribution to journal › Article › peer-review

20. Published

    Acidocella aromatica sp. nov.: an acidophilic heterotrophic alphaproteobacterium with unusual phenotypic traits

    Jones, R. M., Hedrich, S. & Johnson, D. B., 1 Sept 2013, In: Extremophiles. 17, 5, p. 841-850

    Research output: Contribution to journal › Article › peer-review

21. Published

    Acidophile Microbiology in Space and Time

    Johnson, D. B. & Quatrini, R., 21 Feb 2020, In: Current issues in molecular biology. 39, p. 63-76 14 p.

    Research output: Contribution to journal › Article › peer-review

22. Published

    Acidophilic algae isolated from mine-impacted environments and their roles in sustaining heterotrophic acidophiles

    Ňancucheo, I. & Johnson, D. B., 11 Sept 2012, In: Fontiers in Microbiology. 3, p. 325

    Research output: Contribution to journal › Article › peer-review

23. Published

    Aerobic and anaerobic oxidation of hydrogen by acidophilic bacteria

    Hedrich, S. & Johnson, D. B., 1 Dec 2013, In: FEMS Microbiology Letters. 349, 1, p. 40-45

    Research output: Contribution to journal › Article › peer-review

24. Published

    Anaerobic Sulfur Metabolism Coupled to Dissimilatory Iron Reduction in the Extremophile Acidithiobacillus ferrooxidans

    Osorio, H., Mangold, S., Denis, Y., Ñancucheo, I., Esparza, M., Johnson, D. B., Bonnefoy, V., Dopson, M. & Holmes, D. S., 1 Apr 2013, In: Applied and Environmental Microbiology. 79, 7, p. 2172-2181

    Research output: Contribution to journal › Article › peer-review

25. Published

    Approaches for Eliminating Bacteria Introduced during In Situ Bioleaching of Fractured Sulfidic Ores in Deep Subsurface

    Ballerstedt, H., Pakostova, E., Johnson, D. B. & Schippers, A., Aug 2017, In: Solid State Phenomena. 262, p. 70-74

    Research output: Contribution to journal › Article › peer-review

26. Published

    Attachment of acidophilic bacteria to solid surfaces: The significance of species and strain variations.

    Ghauri, M. A., Okibe, N. & Johnson, D. B., 1 Mar 2007, In: Hydrometallurgy. 85, 2-4, p. 72-80

    Research output: Contribution to journal › Article › peer-review

27. Published

    Bacterial and Archaeal Diversity in Sulfide-Bearing Waste Rock at Faro Mine Complex, Yukon Territory, Canada

    Pakostova, E., Johnson, D. B., Bao, Z., MacKenzie, P. M., Ptacek, C. J. & Blowes, D. W., 1 Jun 2020, In: Geomicrobiology Journal. 37, 6, p. 511-519

    Research output: Contribution to journal › Article › peer-review

28. Published

    Bio-processing of a saline, calcareous copper sulfide ore by sequential leaching

    Pakostova, E., Grail, B. M. & Johnson, D. B., Aug 2018, In: Hydrometallurgy. 179, p. 36-43

    Research output: Contribution to journal › Article › peer-review

29. Published

    Biobasierte In-situ-Gewinnung von Industriemetallen aus unzugänglichen Lägerstatten zur EU-Rohstoffsicherung

    Matthies, R., Hejny, H., Hirsch, K., Kahnt, R., Marten, H. & Johnson, D., 12 Sept 2016, In: Georesources Zeitschrift. p. 34-38

    Research output: Contribution to journal › Article › peer-review

30. Published

    Biodiversity and geochemistry of an extremely acidic, low-temperature subterranean environment sustained by chemolithotrophy.

    Kimura, S., Bryan, C. G., Hallberg, K. B. & Johnson, D. B., 1 Aug 2011, In: Environmental Microbiology. 13, 8, p. 2092-2104

    Research output: Contribution to journal › Article › peer-review

31. Published

    Biodiversity and interactions of acidophiles: Key to understanding and optimizing microbial processing of ores and concentrates.

    Johnson, D. B., 1 Dec 2008, In: Transactions of Nonferrous Metals Society of China. 18, 6, p. 1367-1373

    Research output: Contribution to journal › Article › peer-review

32. Published

    Biodiversity of acidophilic prokaryotes

    Hallberg, K. B. & Johnson, D. B., 1 Jan 2001, In: Advances in Applied Microbiology. 49, p. 37-84

    Research output: Contribution to journal › Article › peer-review

33. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journal › Article › peer-review

34. Published

    Biohydrometallurgy and the environment: Intimate and important interplay

    Johnson, D. B., 1 Sept 2006, In: Hydrometallurgy. 83, 1-4, p. 153-166

    Research output: Contribution to journal › Article › peer-review

35. Published

    Bioleaching of Transition Metals From Limonitic Laterite Deposits and Reassessment of the Multiple Roles of Sulfur-Oxidizing Acidophiles in the Process

    Johnson, D. B., Smith, S. & Santos, A. L., 26 Jul 2021, In: Frontiers in Microbiology. 12, 703177.

    Research output: Contribution to journal › Article › peer-review

36. Published

    Bioleaching of arsenic-rich cobalt mineral resources, and evidence for concurrent biomineralisation of scorodite during oxidative bio-processing of skutterudite

    Johnson, D. B., Dybowska, A., Schofield, P., Herrington, R., Smith, S. & Santos, A. L., 1 Aug 2020, In: Hydrometallurgy. 195, 105395.

    Research output: Contribution to journal › Article › peer-review

37. Published

    Bioleaching of pyrite at low pH and low redox potentials by novel mesophilic Gram-positive bacteria.

    Yahya, A. & Johnson, D. B., 1 Feb 2002, In: Hydrometallurgy. 63, 2, p. 181-188

    Research output: Contribution to journal › Article › peer-review

38. Published

    Biological manganese removal from acid mine drainage in constructed wetlands and prototype bioreactors.

    Hallberg, K. B. & Johnson, D. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 115-124

    Research output: Contribution to journal › Article › peer-review

39. Published

    Biologically-induced precipitation of aluminium in synthetic acid mine water

    Falagan Rodriguez, C., Yusta, I. & Johnson, B., 15 May 2017, In: Minerals Engineering. 106, p. 79-85

    Research output: Contribution to journal › Article › peer-review

40. Published

    Biomining - biotechnologies for extracting and recovering metals from ores and waste materials

    Johnson, D. B., 6 May 2014, In: Current Opinion in Biotechnology. 30, p. 24-31

    Research output: Contribution to journal › Article › peer-review

41. Published

    Biomining goes underground

    Johnson, D. B., 27 Feb 2015, In: Nature Geoscience. 8, p. 165-166

    Research output: Contribution to journal › Article › peer-review

42. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journal › Article › peer-review

43. Published

    Biomining: an Established and Dynamic Biotechnology

    Johnson, D. B., 1 Dec 2012, In: Microbiology Indonesia. 6, 4, p. 189-193

    Research output: Contribution to journal › Article › peer-review

44. Published

    Biooxidation of pyrite by defined mixed cultures of moderately thermophilic acidophiles in pH-controlled bioreactors: Significance of microbial interactions.

    Okibe, N. & Johnson, D. B., 5 Sept 2004, In: Biotechnology and Bioengineering. 87, 5, p. 574-583

    Research output: Contribution to journal › Article › peer-review

45. Published

    Bioreductive Dissolution as a Pretreatment for Recalcitrant Rare-Earth Phosphate Minerals Associated with Lateritic Ores

    Nancucheo, I., Oliveira, G., Lopes, M. & Johnson, D. B., 26 Feb 2019, In: Minerals. 9, 3, 136.

    Research output: Contribution to journal › Article › peer-review

46. Published

    Biosynthesis of Zinc Sulfide Quantum Dots Using Waste Off-Gas from Metal Bioremediation Process

    Roussel, J., Murray, A. J., Rolley, J., Johnson, D. B. & Macaskie, L. E., Nov 2015, In: Advanced Materials Research. 1130, p. 555-559

    Research output: Contribution to journal › Article › peer-review

47. Published

    Biosynthesis of zinc sulfide quantum dots using waste off-gas from a metal bioremediation process

    Murray, A. J., Roussel, J., Rolley, J., Woodhall, F., Mikheenko, I. P., Johnson, D. B., Gomez-Bolivar, J., Merroun, M. L. & Macaskie, L. E., 2017, In: RSC Advances. 7, 35, p. 21484-21491

    Research output: Contribution to journal › Article › peer-review

48. Published

    Carbon, Iron and Sulfur Metabolism in Acidophilic Micro-Organisms.

    Johnson, D. B. & Hallberg, K. B., 1 Jan 2009, In: Advances in Microbial Physiology. 54, p. 201-255

    Research output: Contribution to journal › Article › peer-review

49. Published

    Characterisation of an attenuation system for the remediation of Mn(II) contaminated waters.

    Mariner, R., Johnson, D. B. & Hallberg, K. B., 1 Nov 2008, In: Hydrometallurgy. 94, 1-4, p. 100-104

    Research output: Contribution to journal › Article › peer-review

50. Published

    Characteristics of Acidibacillus Spp.: A Novel Genus of Acidophilic Iron-Oxidising Firmicutes

    Barata Holanda, R., Hedrich, S., Falagan Rodriguez, C., Nancucheo, I., Dall’Agnol, H., Grail, B. & Johnson, D. B., Nov 2015, In: Advanced Materials Research. 1130, p. 36-39

    Research output: Contribution to journal › Article › peer-review

51. Published

    Characteristics of a phylogenetically ambiguous, arsenic-oxidizing Thiomonas sp., Thiomonas arsenitoxydans strain 3As(T) sp. nov

    Slyemi, D., Moinier, D., Brochier-Armanet, C., Bonnefoy, V. & Johnson, D. B., 16 Mar 2011, In: Archives of Microbiology. 193, 6, p. 439-49 11 p.

    Research output: Contribution to journal › Article › peer-review