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Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions

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Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions. / Moya-Beltrán, Ana; Beard, Simón; Rojas-Villalobos, Camila et al.
In: The ISME Journal, Vol. 15, No. 11, 11.2021, p. 3221-3238.

Research output: Contribution to journal › Article › peer-review

HarvardHarvard

Moya-Beltrán, A, Beard, S, Rojas-Villalobos, C, Issotta, F, Gallardo, Y, Ulloa, R, Giaveno, A, Degli Esposti, M, Johnson, DB & Quatrini, R 2021, 'Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions', The ISME Journal, vol. 15, no. 11, pp. 3221-3238. https://doi.org/10.1038/s41396-021-00995-x

APA

Moya-Beltrán, A., Beard, S., Rojas-Villalobos, C., Issotta, F., Gallardo, Y., Ulloa, R., Giaveno, A., Degli Esposti, M., Johnson, D. B., & Quatrini, R. (2021). Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions. The ISME Journal, 15(11), 3221-3238. https://doi.org/10.1038/s41396-021-00995-x

CBE

Moya-Beltrán A, Beard S, Rojas-Villalobos C, Issotta F, Gallardo Y, Ulloa R, Giaveno A, Degli Esposti M, Johnson DB, Quatrini R. 2021. Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions. The ISME Journal. 15(11):3221-3238. https://doi.org/10.1038/s41396-021-00995-x

MLA

Moya-Beltrán, Ana et al. "Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions". The ISME Journal. 2021, 15(11). 3221-3238. https://doi.org/10.1038/s41396-021-00995-x

VancouverVancouver

Moya-Beltrán A, Beard S, Rojas-Villalobos C, Issotta F, Gallardo Y, Ulloa R et al. Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions. The ISME Journal. 2021 Nov;15(11):3221-3238. Epub 2021 May 18. doi: 10.1038/s41396-021-00995-x

Author

Moya-Beltrán, Ana ; Beard, Simón ; Rojas-Villalobos, Camila et al. / Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions. In: The ISME Journal. 2021 ; Vol. 15, No. 11. pp. 3221-3238.

RIS

TY - JOUR

T1 - Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions

AU - Moya-Beltrán, Ana

AU - Beard, Simón

AU - Rojas-Villalobos, Camila

AU - Issotta, Francisco

AU - Gallardo, Yasna

AU - Ulloa, Ricardo

AU - Giaveno, Alejandra

AU - Degli Esposti, Mauro

AU - Johnson, D Barrie

AU - Quatrini, Raquel

PY - 2021/11

Y1 - 2021/11

N2 - Members of the genus Acidithiobacillus, now ranked within the class Acidithiobacillia, are model bacteria for the study of chemolithotrophic energy conversion under extreme conditions. Knowledge of the genomic and taxonomic diversity of Acidithiobacillia is still limited. Here, we present a systematic analysis of nearly 100 genomes from the class sampled from a wide range of habitats. Some of these genomes are new and others have been reclassified on the basis of advanced genomic analysis, thus defining 19 Acidithiobacillia lineages ranking at different taxonomic levels. This work provides the most comprehensive classification and pangenomic analysis of this deep-branching class of Proteobacteria to date. The phylogenomic framework obtained illuminates not only the evolutionary past of this lineage, but also the molecular evolution of relevant aerobic respiratory proteins, namely the cytochrome bo ubiquinol oxidases.

AB - Members of the genus Acidithiobacillus, now ranked within the class Acidithiobacillia, are model bacteria for the study of chemolithotrophic energy conversion under extreme conditions. Knowledge of the genomic and taxonomic diversity of Acidithiobacillia is still limited. Here, we present a systematic analysis of nearly 100 genomes from the class sampled from a wide range of habitats. Some of these genomes are new and others have been reclassified on the basis of advanced genomic analysis, thus defining 19 Acidithiobacillia lineages ranking at different taxonomic levels. This work provides the most comprehensive classification and pangenomic analysis of this deep-branching class of Proteobacteria to date. The phylogenomic framework obtained illuminates not only the evolutionary past of this lineage, but also the molecular evolution of relevant aerobic respiratory proteins, namely the cytochrome bo ubiquinol oxidases.

U2 - 10.1038/s41396-021-00995-x

DO - 10.1038/s41396-021-00995-x

M3 - Article

C2 - 34007059

VL - 15

SP - 3221

EP - 3238

JO - The ISME Journal

JF - The ISME Journal

SN - 1751-7362

IS - 11

ER -