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College of Science & Engineering

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  1. Published

    Models of density-dependent genic selection and a new rock-paper-scissors social system.

    Sinervo, B., Heulin, B., Surget-Groba, Y., Clobert, J., Miles, D. B., Corl, A., Chaine, A. & Davis, A., 1 Nov 2007, In: American Naturalist. 170, 5, p. 663-680

    Research output: Contribution to journal › Article › peer-review

  2. Published

    Systems science at the scale of impact: Reconciling bottom up participation with the production of widely applicable research outputs

    Sinclair, F. L., 2017, SUSTAINABLE INTENSIFICATION IN SMALLHOLDER AGRICULTURE: AN INTEGRATED SYSTEMS RESEARCH APPROACH. p. 43-57 (Earthscan Food and Agriculture Series).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  3. Published

    THE OPTIONS BY CONTEXT APPROACH: A PARADIGM SHIFT IN AGRONOMY

    Sinclair, F. & Coe, R., Jun 2019, In: Experimental Agriculture. 55, p. 1-13

    Research output: Contribution to journal › Editorial › peer-review

  4. Published

    The contribution of agroecological approaches to realizing climate-resilient agriculture

    Sinclair, F., Wezel, A., Mbow, C., Chomba, S., Robiglio, V. & Harrison, R., 23 Aug 2019, Global Centre on Adaptation. 46 p.

    Research output: Book/Report › Other report › peer-review

  5. Published

    Agroforestry.

    Sinclair, F. L., Burley, J. (Editor), Evans, J. (Editor) & Youngquist, J. A. (Editor), 1 Jan 2004, Encyclopedia of forest sciences. 2004 ed. Elsevier, p. 27-32

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  6. Published

    Local knowledge of impacts of tree cover on ecosystem services in smallholder coffee production systems

    Sinclair, F. L., Cerdán, C. R., Rebolledo, M. C., Soto, G. & Rapidel, B. S., 1 Jul 2012, In: Agricultural Systems. 110, p. 119-130

    Research output: Contribution to journal › Article › peer-review

  7. Published

    Process-based research in sustainable agricultural development: integrating social,economic and ecological perspectives.

    Sinclair, F. L., 1 Jul 2001, In: Agricultural Systems. 69, 1-2, p. 1-3

    Research output: Contribution to journal › Article › peer-review

  8. Published

    Taking local knowledge about trees seriously.

    Sinclair, F. L., Joshi, L. & Lawrence, A. (Editor), 1 Jan 2001, Forestry: forest users and research: new ways of learning. 2001 ed. ETFRN, p. 45-61

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  9. Published

    Courtship and agonistic sounds by the cichlid fish Pseudotropheus zebra.

    Simões, J. M., Duarte, I. G., Fonseca, P. J., Turner, G. F. & Amorim, M. C., 1 Aug 2008, In: Journal of the Acoustical Society of America. 124, 2, p. 1332-1338

    Research output: Contribution to journal › Article › peer-review

  10. Published

    African cichlid Pseudotropheus spp. males moan to females during foreplay.

    Simões, J. M., Fonseca, P. J., Turner, G. F. & Amorim, M. C., 1 Jun 2008, In: Journal of Fish Biology. 72, 10, p. 2689-2694

    Research output: Contribution to journal › Article › peer-review

  11. Published

    Timing of squid migration reflects North Atlantic climate variability.

    Sims, D. W., Genner, M. J., Southward, A. J. & Hawkins, S. J., 1 Dec 2001, In: Proceedings of The Royal Society B Biological Sciences. 268, 1485, p. 2607-2611

    Research output: Contribution to journal › Article › peer-review

  12. Published

    The spatial ecology of Rajidae from mark-recapture tagging and its implications for assessing fishery interactions and efficacy of Marine Protected Areas

    Simpson, S., Humphries, N. E. & Sims, D. W., 1 Aug 2020, In: Fisheries Research. 228, 105569.

    Research output: Contribution to journal › Article › peer-review

  13. Published

    The vertical structure of turbulent dissipation in shelf seas

    Simpson, J., Crawford, B., Rippeth, T., Campbell, A. & Cheok, J., 1 Aug 1996, In: Journal of Physical Oceanography. 26, 8, p. 1579-1590

    Research output: Contribution to journal › Article › peer-review

  14. Published

    The semi-diurnal cycle of dissipation in a ROFI: model-measurement comparisons.

    Simpson, J., Burchard, H., Fisher, N. R. & Rippeth, T., 1 Jul 2002, In: Continental Shelf Research. 22, 11-13, p. 1615-1628

    Research output: Contribution to journal › Article › peer-review

  15. Published

    A PRESCRIPTIVE MODEL OF STRATIFICATION INDUCED BY FRESH-WATER RUNOFF

    Simpson, J., Sharples, J. & Rippeth, T., 1 Jul 1991, In: Estuarine, Coastal and Shelf Science. 33, 1, p. 23-35

    Research output: Contribution to journal › Article › peer-review

  16. Published

    Non-conservative nutrient fluxes from budgets for the Irish Sea

    Simpson, J. & Rippeth, T., 1 Dec 1998, In: Estuarine, Coastal and Shelf Science. 47, 6, p. 707-714

    Research output: Contribution to journal › Article › peer-review

  17. Published

    Reynolds Stress and TKE production in an estuary with a tidal bore.

    Simpson, J., Fisher, N. & Wiles, P. J., 1 Aug 2004, In: Estuarine, Coastal and Shelf Science. 60, 4, p. 619-627

    Research output: Contribution to journal › Article › peer-review

  18. Published

    Acoustic Dopper Techniques

    Simpson, J., Rippeth, T. P., Williams, E., Betteridge, K., Baumert, H. Z. (Editor) & Sundermann, J. (Editor), 1 Jan 2005, Marine Turbulence: Theories: Observations and Models. 2005 ed. Cambridge University Press, p. 127-138

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  19. Published

    THE CLYDE SEA - A MODEL OF THE SEASONAL CYCLE OF STRATIFICATION AND MIXING

    Simpson, J. & Rippeth, T., 1 Aug 1993, In: Estuarine, Coastal and Shelf Science. 37, 129-144, p. 129-144

    Research output: Contribution to journal › Article › peer-review

  20. Published

    The annual cycle of energy input, modal excitation and physical plus biogenic turbulent dissipation in a temperate lake

    Simpson, J., Woolway, I., Scannell, B., Austin, M., Powell, B. & Maberly, S. C., Jun 2021, In: Water Resources Research. 57, 6, 2020WR029441.

    Research output: Contribution to journal › Article › peer-review

  21. Published

    PERIODIC STRATIFICATION IN THE RHINE ROFI IN THE NORTH-SEA

    Simpson, J., Bos, P., Schirmer, F., Souza, A., Rippeth, T., Jones, S. & Hydes, D., 1993, In: Oceanologica Acta. 16, 1, p. 23-32

    Research output: Contribution to journal › Article › peer-review

  22. Published

    Dissipation and mixing during the onset of stratification in a temperate lake, Windermere

    Simpson, J. H., Lucas, N., Powell, B. & Maberly, S. C., 31 Dec 2014, In: Limnology and Oceanography. 60, 1, p. 29-41

    Research output: Contribution to journal › Article › peer-review

  23. Published

    The interaction of tidal advection, diffusion and mussel filtration in a tidal channel.

    Simpson, J. H., Berx, B., Gascoigne, J. & Saurel, C., 1 Dec 2007, In: Journal of Marine Systems. 68, 3-4, p. 556-568

    Research output: Contribution to journal › Article › peer-review

  24. Published

    The phase lag of turbulent dissipation in tidal flow.

    Simpson, J. H., Rippeth, T. P., Campbell, A. R. & Yanagi, T. (Editor), 1 Jan 2000, Interactions between Estuaries: Coastal Seas and Shelf Seas. 2000 ed. Terra Scientific Publishing, p. 57-67

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  25. Published

    The structure of dissipation in the western Irish Sea front.

    Simpson, J. H., Green, M., Rippeth, T. P., Osborn, T. R. & Nimmo-Smith, W. A., 1 Jun 2009, In: Journal of Marine Systems. 77, 4, p. 428-440

    Research output: Contribution to journal › Article › peer-review

  26. Published

    A test of the influence of tidal stream polarity on the structure of turbulent dissipation.

    Simpson, J. H. & Tinker, J. P., 15 Jan 2009, In: Continental Shelf Research. 29, 1, p. 320-332

    Research output: Contribution to journal › Article › peer-review

  27. Published

    “The Ekman Drain”: a conduit to the deep ocean for shelf material

    Simpson, J. H. & McCandliss, R. R., 1 Oct 2013, In: Ocean Dynamics. 63, 9-10, p. 1063-1072

    Research output: Contribution to journal › Article › peer-review

  28. Published

    Internal seiche modes and bottom boundary-layer dissipation in a temperate lake from acoustic measurements

    Simpson, J. H., Wiles, P. J. & Lincoln, B. J., 1 May 2011, In: Limnology and Oceanography. 56, 5, p. 1893-1906

    Research output: Contribution to journal › Article › peer-review

  29. Published

    Acoustic Dopper Techniques.

    Simpson, J. H., Rippeth, T., Williams, E., Betteridge, K., Baumert, H. Z. (Editor) & Sundermann, J. (Editor), 1 Jan 2005, Marine Turbulence: Theories: Observations and Models. 2005 ed. Cambridge University Press, p. 127-138

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  30. Published

    The impact of tidal straining on the cycle of turbulence in a partially stratified estuary.

    Simpson, J. H., Williams, E., Brasseur, L. H. & Brubaker, J. M., 1 Jan 2005, In: Continental Shelf Research. 25, 1, p. 51-64

    Research output: Contribution to journal › Article › peer-review

  31. Published

    Forced oscillations near the critical latitude for diurnal-inertial resonance.

    Simpson, J. H., Hyder, P., Rippeth, T. P. & Lucas, I. M., 1 Jan 2002, In: Journal of Physical Oceanography. 32, 1, p. 177-187

    Research output: Contribution to journal › Article › peer-review

  32. Published

    The salt fluxes in a tidally-energetic estuary.

    Simpson, J. H., Vennell, R. & Souza, A. J., 1 Jan 2001, In: Estuarine, Coastal and Shelf Science. 52, 1, p. 131-142

    Research output: Contribution to journal › Article › peer-review

  33. Published

    Encapsulation of iodine-loaded adsorbents in blended Portland cement and geopolymer wasteforms

    Simoni, M., Kearney, S., Robshaw, T., Turner, J., O'Donoghue, K., Geddes, D., Sharrad, C., Ogden, M. & Walkley, B., 1 May 2024, In: Cement and Concrete Research. 179, p. 107480 12 p.

    Research output: Contribution to journal › Article › peer-review

  34. Published

    Moving from biodiversity offsets to a target-based approach for ecological compensation

    Simmonds, J. S., Sonter, L. J., Watson, J. E. M., Bennun, L., Costa, H. M., Dutson, G., Edwards, S., Grantham, H., Griffiths, V. F., Jones, J. P. G., Kiesecker, J., Possingham, H. P., Puydarrieux, P., Quétier, F., Rainer, H., Rainey, H., Roe, D., Savy, C. E., Souquet, M., ten Kate, K., Victurine, R., von Hase, A. & Maron, M., Apr 2020, In: Conservation Letters. 13, 2, e12695.

    Research output: Contribution to journal › Article › peer-review

  35. Published

    Identification and predictability of soil quality indicators from conventional soil and vegetation classifications

    Simfukwe, P., Hill, P. W., Emmett, B. A. & Jones, D. L., 22 Oct 2021, In: PLoS ONE. 16, 10, e0248665.

    Research output: Contribution to journal › Article › peer-review

  36. Published

    Soil classification provides a poor indicator of carbon turnover rates in soil

    Simfukwe, P., Hill, P. W., Emmett, B. A. & Jones, D. L., 1 Aug 2011, In: Soil Biology and Biochemistry. 43, 8, p. 1688-1696

    Research output: Contribution to journal › Article › peer-review

  37. Published

    Effects of reconstruction of a pre-European vertebrate assemblage on ground-dwelling arachnids in arid Australia

    Silvey, C. J., Hayward, M. W. & Gibb, H., 1 Jun 2015, In: Oecologia. 178, 2, p. 497-509

    Research output: Contribution to journal › Article › peer-review

  38. Published

    A peek into hospital poo: Tracking pathogens and antimicrobial resistance

    Silvester, R., Perry, W. B., Webster, G., Rushton, L., Baldwin, A., Pass, D. A., Byrnes, N., Kille, P., Farkas, K., Horden, B. K., Weightman, A. J., Jones, G. & Jones, D. L., 30 Dec 2024, In: Journal of Global Antimicrobial Resistance. 39, Supplement, p. 11 1 p.

    Research output: Contribution to journal › Article › peer-review

  39. Published

    Metagenomics unveils the role of hospitals and wastewater treatment plants on the environmental burden of antibiotic resistance genes and opportunistic pathogens

    Silvester, R., Perry, W. B., Webster, G., Rushton, L., Baldwin, A., Pass, D. A., Healey, N., Farkas, K., Craine, N., Cross, G., Kille, P. & Weightman, A. J., 20 Jan 2025, In: Science of the Total Environment. 961, 178403.

    Research output: Contribution to journal › Article › peer-review

  40. E-pub ahead of print

    High-throughput qPCR profiling of antimicrobial resistance genes and bacterial loads in wastewater and receiving environments

    Silvester, R., Woodhall, N., Nurmi, W., Muziasari, W., Farkas, K., Cross, G., Malham, S. K. & Jones, D. L., 15 May 2025, In: Environmental Pollution. 373, p. 126096

    Research output: Contribution to journal › Article › peer-review

  41. Published

    Observations of a diapycnal shortcut to adiabatic upwelling of Antarctic Circumpolar Deep Water

    Silvester, J. M., Lenn, Y. D., Polton, J. A., Rippeth, T. P. & Maqueda, M. M., 25 Nov 2014, In: Geophysical Research Letters. 41, 22, p. 7950-7956

    Research output: Contribution to journal › Article › peer-review

  42. Published

    Modelling rheological and turbulence regimes in kaolinite-rich sediment flows.

    Silva Jacinto, R. & Baas, J. H., 1 Jan 2007.

    Research output: Contribution to conference › Paper

  43. Published

    Simulation of overflow thresholds in urban basins: Case study in Tuxtla Gutiérrez, Mexico

    Silva Cervantes, M., Hernando, A., García-Abril, A., Valbuena, R., Velázquez Saornil, J. & Manzanera, J. A., 1 Sept 2020, In: River Research and Applications. 36, 7, p. 1307-1320 14 p.

    Research output: Contribution to journal › Article › peer-review

  44. Published

    Combined Impact of Sample Size and Modeling Approaches for Predicting Stem Volume in Eucalyptus spp. Forest Plantations Using Field and LiDAR Data

    Silva, V. S. D., Silva, C. A., Mohan, M., Cardil, A., Rex, F. E., Loureiro, G. H., Almeida, D. R. A. D., Broadbent, E. N., Gorgens, E. B., Dalla Corte, A. P., Silva, E. A., Valbuena, R. & Klauberg, C., 1 May 2020, In: Remote Sensing. 12, 9

    Research output: Contribution to journal › Article › peer-review

  45. Published

    Buoyancy-stirring interactions in a subtropical embayment: a synthesis of measurements and model simulations in Maputo Bay, Mozambique.

    Silva, J. D., Simpson, J. H., Hoguane, A. M. & Harcourt-Baldwin, J. L., 1 May 2010, In: African Journal of Marine Science. 32, 1, p. 95-107

    Research output: Contribution to journal › Article › peer-review

  46. Published

    Greenhouse gas emissions from shifting cultivation in the tropics, including uncertainty and sensitivity analysis

    Silva, J. M. N., Carreiras, J. M. B., Rosa, I. & Pereira, J. M. C., 18 Oct 2011, In: Journal of Geophysical Research : Atmospheres. 116

    Research output: Contribution to journal › Article › peer-review

  47. Published

    A comparison of population differentiation in two shore crab species with contrasting distribution along the Portuguese coast, using two morphological methodologies.

    Silva, I. C., Hawkins, S. J. & Paula, J., 27 Aug 2009, In: Marine and Freshwater Research. 60, 8, p. 833-844

    Research output: Contribution to journal › Article › peer-review

  48. Published

    ForestGapR: An r Package for forest gap analysis from canopy height models

    Silva, C. A., Valbuena, R., Pinage, E. R., Mohan, M., Alves de Almeida, D. R., Broadbent, E. N., Jaafar, W. S. W. M., de Almeida Papa, D., Cardil, A. & Klauberg, C., 31 Aug 2019, In: Methods in Ecology and Evolution. 10, 8, p. 1347-1356

    Research output: Contribution to journal › Article › peer-review

  49. Published

    Can arbuscular mycorrhizal fungi and rhizobacteria facilitate 33P uptake in maize plants under water stress?

    Silva, A. M. M., Jones, D. L., Chadwick, D. R., Qi, X., Cotta, S. R., Araujo, V. L. V. P., Matteoli, F. P., Lacerda-Junior, G. V., Pereira, A. P. A., Fernandes-Junior, P. I. & Cardoso, E. J. B. N., 1 Jun 2023, In: Microbiological Research. 271, 127350.

    Research output: Contribution to journal › Article › peer-review

  50. Published

    Abundance, population structure and claw morphology of the semi-terrestrial crab Pachygrapsus marmoratus (Fabricius, 1787) on shores of differing wave exposure.

    Silva, A. C., Brazao, S., Hawkins, S. J., Thompson, R. C. & Boaventura, D. M., 1 Nov 2009, In: Marine Biology. 156, 12, p. 2591-2599

    Research output: Contribution to journal › Article › peer-review

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