Sex, parthenogenesis and genetic structure of rotifers: microsatellite analysis of contemporary and resting egg bank populations.

Gomez, A. & Carvalho, G. R., 1 Feb 2000, In: Molecular Ecology. 9, 2, p. 203-214

Research output: Contribution to journal › Article › peer-review

Phylogeography and regional endemism of a passively dispersing zooplankter: mitochondrial DNA variation in rotiferresting egg banks.

Gomez, A., Carvalho, G. R. & Lunt, D. H., 7 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1458, p. 2189-2197

Research output: Contribution to journal › Article › peer-review

The interplay between colonization history and gene flow in passively dispersing zooplankton: microsatellite analysis of rotifer resting eg banks.

Gomez, A., Adcock, G. J., Lunt, D. H. & Carvalho, G. R., 1 Jan 2002, In: Journal of Evolutionary Biology. 15, 1, p. 158-171

Research output: Contribution to journal › Article › peer-review

Speciation in ancient cryptic species complexes: evidence from the molecular phylogeny of Brachionus plicatilis (Rotifera).

Gomez, A., Serra, M., Carvalho, G. R. & Lunt, D. H., 1 Jul 2002, In: Evolution. 56, 7, p. 1431-1444

Research output: Contribution to journal › Article › peer-review

Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon.

Gomez, A., Wright, P. J., Lunt, D. H., Cancino, J. M., Carvalho, G. R. & Hughes, R. N., 22 Jan 2007, In: Proceedings of The Royal Society B - Biological Sciences. 274, 1607, p. 199-207

Research output: Contribution to journal › Article › peer-review

mt-DNA sequences and possible invasion pathways of the Chinese mitten crab.

Hanfling, B., Carvalho, G. R. & Brandl, R., 9 Aug 2002, In: Marine Ecology Progress Series. 238, p. 307-310

Research output: Contribution to journal › Article › peer-review

A molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio)

Hanfling, B., Bolton, P., Harley, M. & Carvalho, G. R., 1 Mar 2005, In: Freshwater Biology. 50, 3, p. 403-417

Research output: Contribution to journal › Article › peer-review

Late glacial history of the cold-adapted freshwater fish Cottus gobio, revealed by microsatellites.

Hanfling, B., Hellemans, B., Volckaert, F. A. & Carvalho, G. R., 1 Sept 2002, In: Molecular Ecology. 11, 9, p. 1717-1729

Research output: Contribution to journal › Article › peer-review

A common garden design reveals population-specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L.

Harvey, A., Glover, K. A., Taylor, M., Creer, S. & Carvalho, G., 1 Mar 2016, In: Evolutionary Applications. 9, 3, p. 435-449

Research output: Contribution to journal › Article › peer-review

Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?

Harvey, A., Solberg, M. F., Troianou, E., Carvalho, G., Taylor, M. I., Creer, S., Dyrhovden, L., Matre, I. H. & Glover, K. A., 1 Dec 2016, In: BMC Evolutionary Biology. 2016, 16, 264.

Research output: Contribution to journal › Article › peer-review

Plasticity in response to feed availability: Does feeding regime influence the relative growth performance of domesticated, wild and hybrid Atlantic salmon Salmo salar parr?

Harvey, A., Solberg, M. F., Glover, K. A., Taylor, M. I., Creer, S. & Carvalho, G., 1 Sept 2016, In: Journal of Fish Biology. 89, 3, p. 1754-1768

Research output: Contribution to journal › Article › peer-review

Does density influence relative growth performance of farmed, wild, and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?

Harvey, A., Carvalho, G., Taylor, M., Solberg, M. F., Creer, S., Dyrhovden, L., Matre, I. H. & Glover, K. A., 6 Jul 2016, In: Royal Society Open Science. 3, 7, 160152.

Research output: Contribution to journal › Article › peer-review

Paradigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts.

Hauser, L. & Carvalho, G. R., 1 Dec 2008, In: Fish and Fisheries. 9, 4, p. 333-362

Research output: Contribution to journal › Article › peer-review

Haplotype frequency distribution and discriminatory power of two mtDNA fragments in a marine pelagic teleost (Atlantic herring, Clupea harengus)

Hauser, L., Turan, C. & Carvalho, G. R., 1 Dec 2001, In: Heredity. 87, 6, p. 621-630

Research output: Contribution to journal › Article › peer-review

Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper.

Hauser, L., Adcock, G. J., Smith, P. J., Ramirez, J. H. & Carvalho, G. R., 1 Sept 2002, In: Proceedings of the National Academy of Sciences of the USA. 99, 18, p. 11742-11747

Research output: Contribution to journal › Article › peer-review

SNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus)

Helyar, S. J., Limborg, M. T., Bekkevold, D., Babbucci, M., van Houdt, J., Maws, G. E., Bargelloni, L., Nielsen, R. O., Taylor, M. I., Ogden, R., Cariani, A., Carvalho, G. R., FishPopTrace Consortium, [. V. & Panitz, F., 7 Aug 2012, In: PLoS ONE. 7, 8, p. e42089

Research output: Contribution to journal › Article › peer-review

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

Helyar, S., Hemmer-Hansen, J., Bekkevold, D., Taylor, M. I., Ogden, R., Limborg, M. T., Cariani, A., Maes, G. E., Diopere, E., Carvalho, G. & Nielsen, A., Mar 2011, In: Molecular Ecology Resources. 11, S1, p. 123-136

Research output: Contribution to journal › Article › peer-review

A genomic island linked to ecotype divergence in Atlantic cod

Hemmer-Hansen, J., Nielsen, E. E., Therkildsen, N. O., Taylor, M. I., Ogden, R., Geffen, A. J., Bekkevold, D., Helyar, S., Pampoulie, C., Johansen, T., FishPopTrace Consortium, [. V. & Carvalho, G. R., 1 May 2013, In: Molecular Ecology. 22, 10, p. 2653-2667

Research output: Contribution to journal › Article › peer-review

Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

Holman, L. E., de Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 9 Aug 2019, In: Scientific Reports. 9, 11559.

Research output: Contribution to journal › Article › peer-review

Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species

Holman, L. E., Parker-Nance, S., de Bruyn, M., Creer, S., Carvalho, G. & Rius, M., 14 Mar 2022, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 377, 1846, 20210025.

Research output: Contribution to journal › Article › peer-review

Animals, protists and bacteria share marine biogeographic patterns

Holman, L. E., De Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 1 Jun 2021, In: Nature Ecology and Evolution. 5, 6, p. 738–746

Research output: Contribution to journal › Article › peer-review

Phylogenomics and species delimitation for effective conservation of manta and devil rays

Hosegood, J., Humble, E., Ogden, R., De Bruyn, M., Creer, S., Stevens, G. M. W., Abudaya, M., Bassos-Hull, K., Bonfil, R., Fernando, D., Foote, A., Hipperson, H., Jabado, R. W., Kaden, J., Moazzam, M., Peel, L. R., Pollett, S., Ponzo, A., Poortvliet, M., Salah, J., Senn, H., Stewart, J. D., Wintner, S. & Carvalho, G., Dec 2020, In: Molecular Ecology. 29, 24, p. 4783-4796

Research output: Contribution to journal › Article › peer-review

Paradoxical polyembryony? Embryonic cloning in an ancient order of marine bryozoans

Hughes, R. N., D'Amato, M. E., Bishop, J. D., Carvalho, G. R., Craig, S. F., Hansson, L. J., Harley, M. A. & Pemberton, A. J., 22 Jun 2005, In: Biology Letters. 1, 2, p. 178-180

Research output: Contribution to journal › Article › peer-review

Patterns of self compatibility, inbreeding depression, outcrossing, and sex allocation in a marine bryozoan suggest the predominating influence of sperm competition.

Hughes, R. N., Wright, P. J., Carvalho, G. R. & Hutchinson, W. F., 1 Nov 2009, In: Biological Journal of the Linnean Society. 98, 3, p. 519-531

Research output: Contribution to journal › Article › peer-review

Transcriptomics and in vivo tests reveal novel mechanisms underlying endocrine disruption in an ecological sentinel, Nucella lapillus

Hughes, R. N., Pascoal, S., Carvalho, G. R., Vasieva, O., Hughes, R., Cossins, A., Fang, Y., Ashelford, K., Olohan, L., Barroso, C., Mendo, S. & Creer, S., 1 Mar 2013, In: Molecular Ecology. 22, 6, p. 1589-1608

Research output: Contribution to journal › Article › peer-review

Molecular phylogeny supports division of the 'cosmopolitan' taxon Celleporella (Bryozoa; Cheilostomata) into four major clades.

Hughes, R. N., Gomez, A., Wright, P. J., Moyano, H. I., Cancino, J. M., Carvalho, G. R. & Lunt, D. H., 1 Jan 2008, In: Molecular Phylogenetics and Evolution. 46, 1, p. 369-374

Research output: Contribution to journal › Article › peer-review

Plastic and Heritable Components of Phenotypic Variation in Nucella lapillus: An Assessment Using Reciprocal Transplant and Common Garden Experiments

Hughes, R. N., Pascoal, S., Carvalho, G. R., Creer, S., Rock, J., Kawaii, K., Mendo, S. & Hughes, R., 27 Jan 2012, In: PLoS ONE. 7, 1, p. e30289

Research output: Contribution to journal › Article › peer-review

Comparative population genomics of manta rays has global implications for management

Humble, E., Hosegood, J., Carvalho, G., De Bruyn, M., Creer, S., Stevens, G. M. W., Armstrong, A., Bonfil, R., Deakos, M., Fernando, D., Froman, N., Peel, L. R., Pollett, S., Ponzo, A., Stewart, J. D., Wintner, S. & Ogden, R., 23 Nov 2023, (E-pub ahead of print) In: Molecular Ecology.

Research output: Contribution to journal › Article › peer-review

Marked genetic structuring in localised spawning populations of cod Gadus morhua in the North Sea and adjoining waters, as revealed by microsatellites.

Hutchinson, W. F., Carvalho, G. R. & Rogers, S. I., 28 Nov 2001, In: Marine Ecology Progress Series. 223, p. 251-260

Research output: Contribution to journal › Article › peer-review

Temporal analysis of archived samples indicates marked genetic changes in declining North Sea cod.

Hutchinson, W. F., Van Oosterhout, C., Rogers, S. I. & Carvalho, G. R., 1 Oct 2003, In: Proceedings of The Royal Society B - Biological Sciences. 270, 1529, p. 2125-2132

Research output: Contribution to journal › Article › peer-review

Comparative genetic stock structure in three species of commercially exploited Indo-Malay Carangidae (Teleosteii, Perciformes)

Jaafar, T. N. A. M., Taylor, M. I., Nor, S. A. M., de Bruyn, M. & Carvalho, G. R., 20 Feb 2020, In: Journal of Fish Biology. 96, 2, p. 337-349

Research output: Contribution to journal › Article › peer-review

A reliable DNA barcode reference library for the identification of the North European shelf fish fauna

Knebelsberger, T., Landi, M., Neumann, H., Sell, A. F., Campbell, P. D., Laakmann, S., Raupach, M. J., Carvalho, G. R. & Costa, F. O., 12 Mar 2014, In: Molecular Ecology Resources. 14, 5, p. 1060-1071

Research output: Contribution to journal › Article › peer-review

Concordance of allozyme and microsatellite differentiation in a marine fish, but evidence of selection at a microsatellite locus.

Larsson, L. C., Laikre, L., Palm, S., Andre, C., Carvalho, G. R. & Ryman, N., 1 Mar 2007, In: Molecular Ecology. 16, 6, p. 1135-1147

Research output: Contribution to journal › Article › peer-review

Quality of hatchery-reared juveniles for marine fisheries stock enhancement.

Le Vay, L., Carvalho, G., Quinitio, E. T., Lebata, J. H., Ut, V. N. & Fushimi, H., 22 Aug 2007, In: Aquaculture. 268, 1-4, p. 169-180

Research output: Contribution to journal › Article › peer-review

Parasitism perturbs the mucosal microbiome of Atlantic Salmon

Llewellyn, M. S., Leadbeater, S., Garcia, C., Sylvain, F.-E., Custodio, M., Ang, K. P., Powell, F., Carvalho, G., Creer, S., Elliot, J. & Derome, N., 2017, In: Scientific Reports. 7, 43465.

Research output: Contribution to journal › Article › peer-review

The biogeography of the atlantic salmon (Salmo salar) gut microbiome

Llewellyn, M. S., McGinnity, P., Dionne, M., Letourneau, J., Thonier, F., Carvalho, G., Creer, S. & Derome, N., May 2016, In: ISME Journal. 10, p. 1280-1284

Research output: Contribution to journal › Article › peer-review

Strategies for using population genetic markers in the European sentinel flatfish species Dab (Limanda limanda)

Lyons, B. P., Tysklind, N., Stentiford, G. D., Feist, S. W., Taylor, M. I., McCarthy, I. D. & Carvalho, G. R., 1 Jul 2008, In: Marine Environmental Research. 66, 1, p. 179-180

Research output: Contribution to journal › Article › peer-review

The response of epilithic bacteria to different metals regime in two upland streams: assessed by conventional microbiological methods and PCR-DGGE

Mahmoud, H. M., Goulder, R. & Carvalho, G. R., 1 Jul 2005, In: Archiv Fur Hydrobiologie. 163, 3, p. 405-427

Research output: Contribution to journal › Article › peer-review

Whole genome duplication and transposable element proliferation drive genome expansion in Corydoradinae catfishes

Marburger, S., Alexandrou, M., Taggart, J. B., Creer, S., Carvalho, G., Oliveira, C. & Taylor, M. I., 14 Feb 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1872, 20172732.

Research output: Contribution to journal › Article › peer-review

Comparative phylogenography of endemic cyprinids in the south-west Iberian Peninsula: evidence for a new ichthyogeographic area.

Mesquita, N., Cunha, C., Carvalho, G. R. & Coelho, M. M., 1 Aug 2007, In: Journal of Fish Biology. 71, Supplement A, p. 45-75

Research output: Contribution to journal › Article › peer-review

Isolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalis aradensis (Cyprinidae)

Mesquita, N., Cunha, C., Hanfling, B., Carvalho, G. R., Ze-Ze, L., Tenreiro, R. & Coelho, M. M., 1 Dec 2003, In: Molecular Ecology Notes. 3, 4, p. 572-574

Research output: Contribution to journal › Article › peer-review

River basin-related genetic structuring in an endangered fish species, Chondrostoma lusitanicum, based on mtDNA sequencing and RFLP analysis

Mesquita, N., Carvalho, G. R., Shaw, P., Crespo, E. & Coelho, M. M., 1 Mar 2001, In: Heredity. 86, 3, p. 253-264

Research output: Contribution to journal › Article › peer-review

Phylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal

Mesquita, N., Hanfling, B., Carvalho, G. R. & Coelho, M. M., 1 Jun 2005, In: Molecular Ecology. 14, 7, p. 1939-1954

Research output: Contribution to journal › Article › peer-review

Novel Tools for Conservation Genomics: Comparing Two High-Throughput Approaches for SNP Discovery in the Transcriptome of the European Hake

Milano, I., Babbucci, M., Panitz, F., Ogden, R., Nielsen, R. O., Taylor, M. I., Helyar, S. J., Carvalho, G. R., Espiñeira, M., Atanassova, M., Tinti, F., Mae, G. E., Patarnello, T. & Bargelloni, L., 22 Nov 2011, In: PLoS ONE. 6, 11, p. e28008

Research output: Contribution to journal › Article › peer-review

Outlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius)

Milano, I., Babbucci, M., Cariani, A., Atanassova, M., Bekkevold, D., Carvalho, G., Espineira, M., Fiorentino, F., Garofalo, G., Geffen, A., Hansen, J. H., Helyar, S. J., Nielsen, E. E., Ogden, R., Patarnello, T., Stagioni, M., Tinti, F. & Bargelloni, L., 18 Nov 2013, In: Molecular Ecology. 23, 1, p. 118-135

Research output: Contribution to journal › Article › peer-review

Comparative demographic impacts of 'info-chemicals' and exploitative competition: an empirical test using Daphnia magna.

Mitchell, S. E. & Carvalho, G. R., 1 Mar 2002, In: Freshwater Biology. 47, 3, p. 459-471

Research output: Contribution to journal › Article › peer-review

SNP Discovery in European Anchovy (Engraulis encrasicolus, L) by High-Throughput Transcriptome and Genome Sequencing

Montes, I., Conklin, D., Albania, A., Creer, S., Carvalho, G. R., Santos, M. & Estonba, A., 1 Aug 2013, In: PLoS ONE. 8, 8, p. e70051

Research output: Contribution to journal › Article › peer-review

No loss of genetic diversity in the exploited and recently collapsed population of Bay of Biscay anchovy (Engraulis encrasicolus, L.)

Montes, I., Irondo, M., Manzano, C., Santos, M., Conklin, D., Carvalho, G., Irigoien, X. & Estonba, A., May 2016, In: Marine Biology. 163, 98.

Research output: Contribution to journal › Article › peer-review

Species, sex, size and male maturity composition of previously unreported elasmobranch landings in Kuwait, Qatar and Abu Dhabi Emirate

Moore, A. B., McCarthy, I. D., Carvalho, G. R. & Pierce, R., 1 Apr 2012, In: Journal of Fish Biology. 80, 5, p. 1619-1642

Research output: Contribution to journal › Article › peer-review

Environmental DNA size sorting and degradation experiment indicates the state of Daphnia magna mitochondrial and nuclear eDNA is subcellular

Moushomi, R., Wilgar, G., Carvalho, G., Creer, S. & Seymour, M., 29 Aug 2019, In: Scientific Reports. 9, 12500 (2019.

Research output: Contribution to journal › Article › peer-review