1. Article › Research › Peer-reviewed
2. Published

   A DNA-Based Approach for the Forensic Identification of Asiatic Black Bear (Ursus thibetanus) in a Traditional Asian Medicine.

   Peppin, L., McEwing, R., Carvalho, G. R. & Ogden, R., 1 Nov 2008, In: Journal of Forensic Sciences. 53, 6, p. 1358-1362

   Research output: Contribution to journal › Article › peer-review

3. Published

   A Ranking System for Reference Libraries of DNA Barcodes: Application to Marine Fish Species from Portugal

   Costa, F. O., Landi, M., Martins, R., Costa, M. A., Carneiro, M., Alves, M. J., Steinke, D. & Carvalho, G. R., 25 Apr 2012, In: PLoS ONE. 7, 4, p. e35858

   Research output: Contribution to journal › Article › peer-review

4. Published

   A common garden design reveals population-specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L.

   Harvey, A., Glover, K. A., Taylor, M., Creer, S. & Carvalho, G., 1 Mar 2016, In: Evolutionary Applications. 9, 3, p. 435-449

   Research output: Contribution to journal › Article › peer-review

5. Published

   A genomic island linked to ecotype divergence in Atlantic cod

   Hemmer-Hansen, J., Nielsen, E. E., Therkildsen, N. O., Taylor, M. I., Ogden, R., Geffen, A. J., Bekkevold, D., Helyar, S., Pampoulie, C., Johansen, T., FishPopTrace Consortium, N. V. & Carvalho, G. R., 1 May 2013, In: Molecular Ecology. 22, 10, p. 2653-2667

   Research output: Contribution to journal › Article › peer-review

6. Published

   A molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio)

   Hanfling, B., Bolton, P., Harley, M. & Carvalho, G. R., 1 Mar 2005, In: Freshwater Biology. 50, 3, p. 403-417

   Research output: Contribution to journal › Article › peer-review

7. Published

   A reliable DNA barcode reference library for the identification of the North European shelf fish fauna

   Knebelsberger, T., Landi, M., Neumann, H., Sell, A. F., Campbell, P. D., Laakmann, S., Raupach, M. J., Carvalho, G. R. & Costa, F. O., 12 Mar 2014, In: Molecular Ecology Resources. 14, 5, p. 1060-1071

   Research output: Contribution to journal › Article › peer-review

8. Published

   A technique for the molecular genetic analysis of Daphnia resting eggs from sub-recent lake sediments.

   Reid, V. A., Carvalho, G. R., George, D. G. & Griffiths, H. I., 1 May 2002, In: Journal of Paleolimnology. 27, 4, p. 481-486

   Research output: Contribution to journal › Article › peer-review

9. Published

   Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms

   Seymour, M., Durance, I., Cosby, B. J., Ransom-Jones, E., Deiner, K., Ormerod, S. J., Colbourne, J. K., Wilgar, G., Carvalho, G., De Bruyn, M., Edwards, F., Emmett, B. A., Bik, H. M. & Creer, S., 22 Jan 2018, In: Communications Biology. 1, 4.

   Research output: Contribution to journal › Article › peer-review

10. Published

    Age of cichlids: New dates for ancient lake fish radiations

    Genner, M. J., Seehausen, O., Lunt, D. H., Joyce, D. A., Shaw, P. W., Carvalho, G. R. & Turner, G. F., 1 May 2007, In: Molecular Biology and Evolution. 24, 5, p. 1269-1282

    Research output: Contribution to journal › Article › peer-review

11. Published

    Animals, protists and bacteria share marine biogeographic patterns

    Holman, L. E., De Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 1 Jun 2021, In: Nature Ecology and Evolution. 5, 6, p. 738–746

    Research output: Contribution to journal › Article › peer-review

12. Published

    Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

    Bista, I., Carvalho, G., Walsh, K., Seymour, M., Hajibabaei, M., Lallias, D., Christmas, M. & Creer, S., Jan 2017, In: Nature Communications. 8, 14087.

    Research output: Contribution to journal › Article › peer-review

13. Published

    Anonymous nuclear markers for SouthEast Asian halfbeak fishes (Dermogenys)

    De Bruyn, M., Grail, W., Barlow, A. & Carvalho, G. R., 1 Sept 2010, In: Conservation Genetics Resources. 2, 1, p. 325-327

    Research output: Contribution to journal › Article › peer-review

14. Published

    Anonymous nuclear markers for halfbeak fishes of the genus Hemirhamphodon

    De Bruyn, M., Carvalho, G. R., de Bruyn, M. & Grail, W. C., 1 Jan 2011, In: Conservation Genetics Resources. 3, 1, p. 155-157

    Research output: Contribution to journal › Article › peer-review

15. Published

    Anonymous nuclear markers for the Blue Panchax killifish (Aplocheilus panchax)

    De Bruyn, M., de Bruyn, M., Grail, W. & Carvalho, G. R., 1 Jan 2011, In: Conservation Genetics Resources. 3, 1, p. 53-55

    Research output: Contribution to journal › Article › peer-review

16. Published

    Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

    Helyar, S., Hemmer-Hansen, J., Bekkevold, D., Taylor, M. I., Ogden, R., Limborg, M. T., Cariani, A., Maes, G. E., Diopere, E., Carvalho, G. & Nielsen, A., Mar 2011, In: Molecular Ecology Resources. 11, S1, p. 123-136

    Research output: Contribution to journal › Article › peer-review

17. Published

    Biocomplexity in a highly migratory pelagic marine fish, Atlantic herring.

    Ruzzante, D. E., Mariani, S., Bekkevold, D., Andre, C., Mosegaard, H., Clausen, L. A., Dahlgren, T. G., Hutchinson, W. F., Hatfield, E. M., Torstensen, E., Brigham, J., Simmonds, E. J., Laikre, L., Larsson, L. C., Stet, R. J., Ryman, N. & Carvalho, G. R., 22 Jun 2006, In: Proceedings of The Royal Society B - Biological Sciences. 273, 1593, p. 1459-1464

    Research output: Contribution to journal › Article › peer-review

18. Published

    Biogeography of the Indo-Australian Archipelago

    De Bruyn, M., Carvalho, G. R., Lohman, D. J., de Bruyn, M., Page, T., von Rintelen, K., Hall, R., Ng, P. K., Shih, H. T. & von Rintelen, T., 1 Dec 2011, In: Annual Review of Ecology, Evolution, and Systematics. 42, p. 205-226

    Research output: Contribution to journal › Article › peer-review

19. Published

    Borneo and Indochina are Major Evolutionary Hotspots for Southeast Asian Biodiversity

    De Bruyn, M., de Bruyn, M., Stelbrink, B., Morley, R. J., Hall, R., Carvalho, G. R., Cannon, C. H., van den Bergh, G., Meijaard, E., Metcalfe, I., Boitani, L., Maiorano, L. & Shoup, R. V., 30 Nov 2014, In: Systematic Biology. 63, 6, p. 879-901

    Research output: Contribution to journal › Article › peer-review

20. Published

    Combination of genetics and spatial modelling highlights the sensitivity of cod (Gadus morhua) population diversity in the North Sea to distributions of fishing

    Carvalho, G. R., Heath, M. R., Culling, M. A., Crozier, W. W., Fox, C. J., Gurney, W. S., Hutchinson, W. F., Nielsen, E. E., O'Sullivan, M., Preedy, K. F., Righton, D. A., Speirs, D. C., Taylor, M. I. & Wright, P. J., 17 Nov 2013, In: ICES Journal of Marine Science. 71, 4, p. 794-807

    Research output: Contribution to journal › Article › peer-review

21. Published

    Comparative demographic impacts of 'info-chemicals' and exploitative competition: an empirical test using Daphnia magna.

    Mitchell, S. E. & Carvalho, G. R., 1 Mar 2002, In: Freshwater Biology. 47, 3, p. 459-471

    Research output: Contribution to journal › Article › peer-review

22. Published

    Comparative genetic stock structure in three species of commercially exploited Indo-Malay Carangidae (Teleosteii, Perciformes)

    Jaafar, T. N. A. M., Taylor, M. I., Nor, S. A. M., de Bruyn, M. & Carvalho, G. R., 20 Feb 2020, In: Journal of Fish Biology. 96, 2, p. 337-349

    Research output: Contribution to journal › Article › peer-review

23. Published

    Comparative phylogenography of endemic cyprinids in the south-west Iberian Peninsula: evidence for a new ichthyogeographic area.

    Mesquita, N., Cunha, C., Carvalho, G. R. & Coelho, M. M., 1 Aug 2007, In: Journal of Fish Biology. 71, Supplement A, p. 45-75

    Research output: Contribution to journal › Article › peer-review

24. E-pub ahead of print

    Comparative population genomics of manta rays has global implications for management

    Humble, E., Hosegood, J., Carvalho, G., De Bruyn, M., Creer, S., Stevens, G. M. W., Armstrong, A., Bonfil, R., Deakos, M., Fernando, D., Froman, N., Peel, L. R., Pollett, S., Ponzo, A., Stewart, J. D., Wintner, S. & Ogden, R., 23 Nov 2023, (E-pub ahead of print) In: Molecular Ecology.

    Research output: Contribution to journal › Article › peer-review

25. Published

    Concordance of allozyme and microsatellite differentiation in a marine fish, but evidence of selection at a microsatellite locus.

    Larsson, L. C., Laikre, L., Palm, S., Andre, C., Carvalho, G. R. & Ryman, N., 1 Mar 2007, In: Molecular Ecology. 16, 6, p. 1135-1147

    Research output: Contribution to journal › Article › peer-review

26. Published

    DNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)

    De Bruyn, M., Jaafar, T. N., Taylor, M. I., Nor, S. A., de Bruyn, M. & Carvalho, G. R., 29 Nov 2012, In: PLoS ONE. 7, 11, p. e49623

    Research output: Contribution to journal › Article › peer-review

27. Published

    DNA barcodes of fish of the Scotia Sea, Antarctica indicate priority groups for taxonomic and systematics focus.

    Rock, J., Costa, F. O., Walker, D. I., North, A. W., Hutchinson, W. F. & Carvalho, G. R., 1 Jun 2008, In: Antarctic Science. 20, 3, p. 253-262

    Research output: Contribution to journal › Article › peer-review

28. Published

    DNA barcoding for species assignment: the case of Mediterranean marine fishes

    Carvalho, G. R., Landi, M. D., Arculeo, M., Biondo, G., Martins, R. & Carneiro, M., 15 Sept 2014, In: PLoS ONE. 9, 9

    Research output: Contribution to journal › Article › peer-review

29. Published

    DNA markers indicate that distinct spawning cohorts and aggregations of Patagonian squid, Loligo gahi, do not represent genetically discrete subpopulations

    Shaw, P. W., Arkhipkin, A. I., Adcock, G. J., Burnett, W. J., Carvalho, G. R., Scherbich, J. N. & Villegas, P. A., 1 May 2004, In: Marine Biology. 144, 5, p. 961-970

    Research output: Contribution to journal › Article › peer-review

30. Published

    Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates

    Vieira, P. E., Desiderato, A., Holdich, D. M., Soares, P., Creer, S., Carvalho, G., Costa, F. O. & Queiroga, H., 1 Apr 2019, In: Molecular Ecology. 28, 7, p. 1784-1800

    Research output: Contribution to journal › Article › peer-review

31. Published

    Demographic reconstruction from ancient DNA supports rapid extinction of the great auk

    Thomas, J., Carvalho, G., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. YW., Sigfússon, A. Þ., Jósefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Samaniego Castruita, J. A., Niemann, J., Sinding, M-H. S., Sandoval-Velasco, M., Soares, A. ER., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C., Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, M., Fjeldsa, J., Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M. T. P. & Knapp, M., 26 Nov 2019, In: Elife. 8, e47509.

    Research output: Contribution to journal › Article › peer-review

32. Published

    Detecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci.

    Andre, C., Larsson, L. C., Laikre, L., Bekkevold, D., Brigham, J., Carvalho, G. R., Dahlgren, T. G., Hutchinson, W. F., Mariani, S., Mudde, K., Ruzzante, D. E. & Ryman, N., 1 Feb 2011, In: Heredity. 106, 2, p. 270-280

    Research output: Contribution to journal › Article › peer-review

33. Published

    Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water

    Holman, L. E., de Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 9 Aug 2019, In: Scientific Reports. 9, 11559.

    Research output: Contribution to journal › Article › peer-review

34. Published

    Development and Application of Microsatellites in Carcinus maenas: Genetic Differentiation between Northern and Central Portuguese Populations

    Pascoal, S., Creer, S., Taylor, M. I., Queiroga, H., Carvalho, G. & Mendo, S., 30 Sept 2009, In: PLoS ONE. 4, 9, p. e7268

    Research output: Contribution to journal › Article › peer-review

35. Published

    Development of 30 microsatellite markers for dab (Limanda limanda L.): a key UK marine biomonitoring species.

    Tysklind, N., Taylor, M. I., Lyons, B. P., McCarthy, I. D. & Carvalho, G. R., 1 May 2009, In: Molecular Ecology Resources. 9, 3, p. 951-955

    Research output: Contribution to journal › Article › peer-review

36. Published

    Disentangling the effects of evolutionary, demographic, and environmental factors influencing genetic structure of natural populations: Atlantic herring as a case study.

    Gaggiotti, O. E., Bekkevold, D., Jorgensen, H. B., Foll, M., Carvalho, G. R., Andre, C. & Ruzzante, D. E., 1 Nov 2009, In: Evolution. 63, 11, p. 2939-2951

    Research output: Contribution to journal › Article › peer-review

37. Published

    Disentangling the effects of sex, life history and genetic background in Atlantic salmon: growth, heart and liver under common garden conditions

    Perry, W. B., Solberg, M. F., Brodie, C., Medina, A. C., Pillay, K. G., Egerton, A., Harvey, A., Creer, S., Llewellyn, M., Taylor, M., Carvalho, G. & Glover, K. A., 7 Oct 2020, In: Royal Society Open Science. 7, 10, 200811.

    Research output: Contribution to journal › Article › peer-review

38. Published

    Does density influence relative growth performance of farmed, wild, and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?

    Harvey, A., Carvalho, G., Taylor, M., Solberg, M. F., Creer, S., Dyrhovden, L., Matre, I. H. & Glover, K. A., 6 Jul 2016, In: Royal Society Open Science. 3, 7, 160152.

    Research output: Contribution to journal › Article › peer-review

39. Published

    Domestication-induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (Salmo salar L.)

    Perry, W. B., Kaufmann, J., Solberg, M. F., Brodie, C., Medina, A. M. C., Pillay, K., Egerton, A., Harvey, A., Phillips, K. P., Coughlan, J., Egan, F., Grealis, R., Hutton, S., Leseur, F., Ryan, S., Poole, R., Rogan, G., Ryder, E., Schaal, P., Waters, C., Wynne, R., Taylor, M., Prodohl, P., Creer, S., Llewellyn, M., McGinnity, P., Carvalho, G. & Glover, K. A., 28 Sept 2021, In: Evolutionary Applications. 14, 9, p. 2319-2332 14 p.

    Research output: Contribution to journal › Article › peer-review

40. Published

    Ecological community dynamics: 20 years of moth sampling reveals the importance of generalists for community stability

    Carvalho, G., Seymour, M., Brown, N., Wood, C., Goertz, S. & de Bruyn, M., 1 Dec 2020, In: Basic and Applied Ecology. 49, p. 34-44 10 p.

    Research output: Contribution to journal › Article › peer-review

41. Published

    Environmental DNA for Wildlife Biology and Biodiversity Monitoring

    Evans, A. R., Bohmann, K., Evans, A., Gilbert, M. T., Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & De Bruyn, M., 10 May 2014, In: Trends in Ecology and Evolution. 29, 6, p. 358-367

    Research output: Contribution to journal › Article › peer-review

42. Published

    Environmental DNA metabarcoding for fish diversity assessment in a macrotidal estuary: A comparison with established fish survey methods

    Gibson, T., Carvalho, G., Ellison, A., Gargiulo, E., Hatton-Ellis, T., Handley, L. L., Mariani, S., Collins, R. A., Sellers, G., Distaso, M., Zampieri, C. & Creer, S., 1 Nov 2023, In: Estuarine, Coastal and Shelf Science. 294, 108522.

    Research output: Contribution to journal › Article › peer-review

43. Published

    Environmental DNA provides higher resolution assessment of riverine biodiversity and ecosystem function via spatio-temporal nestedness and turnover partitioning

    Seymour, M., Edwards, F. K., Cosby, B. J., Bista, I., Scarlett, P. M., Brailsford, F., Glanville, H., de Bruyn, M., Carvalho, G. & Creer, S., 3 May 2021, In: Communications Biology. 4, 1, 512.

    Research output: Contribution to journal › Article › peer-review

44. Published

    Environmental DNA size sorting and degradation experiment indicates the state of Daphnia magna mitochondrial and nuclear eDNA is subcellular

    Moushomi, R., Wilgar, G., Carvalho, G., Creer, S. & Seymour, M., 29 Aug 2019, In: Scientific Reports. 9, 12500 (2019.

    Research output: Contribution to journal › Article › peer-review

45. Published

    Environmental correlates of population differentiation in Atlantic herring

    Bekkevold, D., Aandre, C., Dahlgren, T. G., Clausen, L. A., Torstensen, E., Mosegaard, H., Carvalho, G. R., Christensen, T. B., Norlinder, E. & Ruzzante, D. E., 1 Dec 2005, In: Evolution. 59, 12, p. 2656-2668

    Research output: Contribution to journal › Article › peer-review

46. Published

    Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)

    De Bruyn, M., Limborg, M. T., Helyar, S. J., DeBruyn, M., Taylor, M. I., Nielson, E. E., Ogden, R., Carvalho, G. R. & Bekkevold, D., 1 Aug 2012, In: Molecular Ecology. 21, 15, p. 3686-3703

    Research output: Contribution to journal › Article › peer-review

47. Published

    Epistatic regulation of growth in Atlantic salmon revealed: a QTL study performed on the domesticated-wild interface

    Besnier, F., Solberg, M. F., Harvey, A., Carvalho, G., Bekkevold, D., Taylor, M. I., Creer, S., Nielsen, E. E., Skaala, O., Ayllon, F., Dahle, G. & Glover, K. A., 7 Feb 2020, In: BMC Genetics. 21, 1, 13.

    Research output: Contribution to journal › Article › peer-review

48. Published

    Evaluating genetic traceability methods for captive-bred marine fish and their applications in fisheries management and wildlife forensics

    Bylemans, J., Maes, G. E., Diopere, E., Cariani, A., Senn, H., Taylor, M. I., Helyar, S., Bargelloni, L., Bonaldo, A., Carvalho, G., Guarniero, I., Komen, H., Martinsohn, J. T., Nielsen, E. E., Tinti, F., Volckaert, F. A. M. & Ogden, R., 25 Feb 2016, In: Aquaculture Environment Interactions. 8, p. 131-145

    Research output: Contribution to journal › Article › peer-review

49. Published

    Evolution of a cichlid fish in a Lake Malawi satellite lake.

    Genner, M. J., Nichols, P., Carvalho, G. R., Robinson, R. L., Shaw, P. W., Smith, A. & Turner, G. F., 22 Sept 2007, In: Proceedings of The Royal Society B - Biological Sciences. 274, 1623, p. 2249-2257

    Research output: Contribution to journal › Article › peer-review

50. Published

    Evolutionary drivers of kype size in Atlantic salmon (Salmo salar): domestication, age and genetics

    Perry, W. B., Solberg, M. F., Besnier, F., Dyrhovden, L., Matre, I. H., Fjelldal, P. G., Ayllon, F., Creer, S., Llewelyn, M., Taylor, M. I., Carvalho, G. & Glover, K. A., 17 Apr 2019, In: Royal Society Open Science. 6, 4, 190021.

    Research output: Contribution to journal › Article › peer-review

51. Published

    Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks

    Seymour, M., Edwards, F., Cosby, B., Kelly, M., de Bruyn, M., Carvalho, G. & Creer, S., 10 Aug 2020, In: Science of the Total Environment. 729, 138801.

    Research output: Contribution to journal › Article › peer-review