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College of Science & Engineering

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  1. Published

    Sulfidogenesis at low pH: a novel approach for bioremediating acid rock drainage and recovering soluble metals.

    Johnson, D. B., Rowe, O. F., Kimura, S. & Hallberg, K. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

  2. Published
  3. Published

    Biodiversity and interactions of acidophiles: Key to understanding and optimizing microbial processing of ores and concentrates.

    Johnson, D. B., 1 Dec 2008, In: Transactions of Nonferrous Metals Society of China. 18, 6, p. 1367-1373

    Research output: Contribution to journal › Article › peer-review

  4. Published

    Reduction of ferric iron by acidophilic heterotrophic bacteria: evidence for constitutive and inducible enzyme systems in Acidiphilium spp.

    Johnson, D. B. & Bridge, T. A., 1 Feb 2002, In: Journal of Applied Microbiology. 92, 2, p. 315-321

    Research output: Contribution to journal › Article › peer-review

  5. Published

    Novel thermo-acidophilic bacteria isolated from geothermal sites in Yellowstone National Park: physiological and phylogenetic characteristics.

    Johnson, D. B., Okibe, N. & Roberto, F. F., 1 Jul 2003, In: Archives of Microbiology. 180, 1, p. 60-68

    Research output: Contribution to journal › Article › peer-review

  6. Published

    Biomining goes underground

    Johnson, D. B., 27 Feb 2015, In: Nature Geoscience. 8, p. 165-166

    Research output: Contribution to journal › Article › peer-review

  7. Published
  8. Published

    Genus II. Leptospirillum

    Johnson, D. B., Boone, D. R. (ed.) & Castenholtz, R. W. (ed.), 1 Jan 2001, Bergey's Manual of Systematic Bacteriology: Archaea and the Deeply Branching and Phototrophic Bacteria v. 1. 2001 ed. Springer, p. 453-457

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  9. Published

    Physiology and ecology of acidophilic microorganisms.

    Johnson, D. B., Gerday, C. (ed.) & Glansdorff, N. (ed.), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  10. Published

    Dissimilatory reduction of sulfate in extremely acidic environments is carried out by novel sulfidogenic bacteria in syntrophic consortia.

    Johnson, D. B., Rowe, O. F., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 36.

    Research output: Contribution to conference › Paper

  11. Published

    Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis

    Johnson, D. B., Okibe, N. & Hallberg, K. B., 1 Mar 2005, In: Journal of Microbiological Methods. 60, 3, p. 299-313

    Research output: Contribution to journal › Article › peer-review

  12. Published

    A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores

    Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58

    Research output: Contribution to journal › Article › peer-review

  13. Published

    Survival of acidophilic bacteria under conditions of substrate depletion that occur during culture storage.

    Johnson, D. B., Bruhn, D. F., Roberto, F. F., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1195-1203.

    Research output: Contribution to conference › Paper

  14. Published

    Carbon, Iron and Sulfur Metabolism in Acidophilic Micro-Organisms.

    Johnson, D. B. & Hallberg, K. B., 1 Jan 2009, In: Advances in Microbial Physiology. 54, p. 201-255

    Research output: Contribution to journal › Article › peer-review

  15. Published

    Importance of microbial ecology in the development of new mineral technologies.

    Johnson, D. B., 1 Feb 2001, In: Hydrometallurgy. 59, 2-3, p. 147-157

    Research output: Contribution to journal › Article › peer-review

  16. Published

    Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, as revealed by a combination of cultivation-based and cultivation-independent techniques.

    Johnson, D. B., Kimura, S., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 139.

    Research output: Contribution to conference › Paper

  17. Published
  18. Published

    Biohydrometallurgy and the environment: Intimate and important interplay

    Johnson, D. B., 1 Sept 2006, In: Hydrometallurgy. 83, 1-4, p. 153-166

    Research output: Contribution to journal › Article › peer-review

  19. Published

    Investigation of the microbial diversity of an extremely acidic, metal-rich water body (Lake Robule, Bor, Serbia)

    Johnson, D. B., Stanković, S., Morić, I., Pavić, A., Vasiljević, B., Johnson, B. D. & Cvetković, V., 30 Jan 2014, In: Journal of the Serbian Chemical Society. 79, 6, p. 729-741

    Research output: Contribution to journal › Article › peer-review

  20. Published

    Biomining: an Established and Dynamic Biotechnology

    Johnson, D. B., 1 Dec 2012, In: Microbiology Indonesia. 6, 4, p. 189-193

    Research output: Contribution to journal › Article › peer-review

  21. Published

    The microbiology of acidic mine waters.

    Johnson, D. B. & Hallberg, K., 1 Sept 2003, In: Research in Microbiology. 154, 7, p. 466-473

    Research output: Contribution to journal › Article › peer-review

  22. Published

    Biohydrometallurgy and the environment: intimate and important associations.

    Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, p. liii-lxvii.

    Research output: Contribution to conference › Paper

  23. Published

    Development and application of bioprocessing technologies in the metal mining industry

    Johnson, D. B., 1 Aug 2012.

    Research output: Contribution to conference › Paper

  24. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  25. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters.

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 1 Jan 2009, p. 693-696.

    Research output: Contribution to conference › Paper

  26. Published

    Isolation and characterization of Acidicaldus organivorus, gen. nov., sp nov.: a novel sulfur-oxidizing, ferric iron-reducing thermo-acidophilic heterotrophic Proteobacterium.

    Johnson, D. B., Stallwood, B., Kimura, S. & Hallberg, K. B., 1 Apr 2006, In: Archives of Microbiology. 185, 3, p. 212-221

    Research output: Contribution to journal › Article › peer-review

  27. Published

    Novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams

    Johnson, D. B., Sen, A. M., Kimura, S., Rowe, O. F. & Hallberg, K. B., 1 Mar 2006, In: Mineral Processing and Extractive Metallurgy. 115, 1, p. 19-24

    Research output: Contribution to journal › Article › peer-review

  28. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journal › Article › peer-review

  29. Published
  30. Published

    Development of an integrated microbiological approach for remediation of acid mine drainage and recovery of heavy metals.

    Johnson, D. B., Rowe, O., Kimura, S., Hallberg, K. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 151-157.

    Research output: Contribution to conference › Paper

  31. Published

    Isolation and phylogenetic characterisation of acidophilic microorganisms indigenous to acidic drainage wartes at an abandoned Norwegian copper mine

    Johnson, D. B., Rolfe, S., Hallberg, K. & Iversen, E., 1 Oct 2001, In: Environmental Microbiology. 3, 10, p. 630-637

    Research output: Contribution to journal › Article › peer-review

  32. Published

    Redox transformations of iron at extremely low pH: fundamental and applied aspects

    Johnson, D. B., Kanao, T. & Hedrich, S., 16 Mar 2012, In: Frontiers in Microbiology. 3, p. 96

    Research output: Contribution to journal › Article › peer-review

  33. Published

    Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles

    Johnson, D. B., 1 Oct 2012, In: Hydrometallurgy. 127-128, p. 172-177

    Research output: Contribution to journal › Article › peer-review

  34. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journal › Article › peer-review

  35. Published

    Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. (ed.) & Schippers, A. (ed.), 19 Jan 2017, Frontiers Media. 155 p.

    Research output: Book/Report › Book

  36. Published

    The area-independent effects of habitat complexity on biodiversity vary between regions.

    Johnson, M. P., Frost, N. J., Mosley, M. W., Roberts, M. F. & Hawkins, S. J., 1 Feb 2003, In: Ecology Letters. 6, 2, p. 126-132

    Research output: Contribution to journal › Article › peer-review

  37. Published

    The persistent spatial patchiness of limpet grazing.

    Johnson, M. P., Hanley, M. E., Frost, N. J., Mosley, M. W. & Hawkins, S. J., 31 Oct 2008, In: Journal of Experimental Marine Biology and Ecology. 365, 2, p. 136-141

    Research output: Contribution to journal › Article › peer-review

  38. Published

    Baroclinic wave drag from two closely spaced sills in a narrow fjord as inferred from basin water mixing.

    Johnsson, M., Green, J. A. & Stigebrandt, A., 3 Nov 2007, In: Journal of Geophysical Research - Oceans. 112, C11, p. C11002

    Research output: Contribution to journal › Article › peer-review

  39. Published

    Comparisons of plankton activity at 59°N and 37°N during two Lagrangian drift experiments in the North Atlantic in June and July 1996.

    Joint, I., Williams, P. J. & Savidge, G., 1 Jan 2001, In: Deep Sea Research Part II: Topical Studies in Oceanography. 48, 4-5, p. 1043-1061

    Research output: Contribution to journal › Article › peer-review

  40. Published

    Generation and propagation of a 1550nm 10Gb/s optical orthogonal frequency division multiplexed signal over 1000m of multimode fibre using a directly modulated DFB

    Jolley, N. E., Kee, H., Rickard, R., Tang, J. & Cordina, K., 11 Mar 2005.

    Research output: Contribution to conference › Paper

  41. Published

    The Potential for Replacement of Live Feeds in Larval Culture

    Jones, D. A., Kamarudin, M. S. & Le Vay, L., 1993, In: Journal of the World Aquaculture Society. 24, 2, p. 199-210 12 p.

    Research output: Contribution to journal › Article › peer-review

  42. Published

    Prioritization of knowledge needs for sustainable aquaculture: a national and global perspective

    Jones, A. C., Mead, A., Kaiser, M. J., Austen, M. C., Adrian, A. W., Auchterlonie, N. A., Black, K. D., Blow, L. R., Bury, C., Brown, J. H., Burnell, G. M., Connolly, E., Dingwell, A., Derrick, S., Eno, N. C., Gautier, D. J., Green, K. A., Gubbins, M., Hart, P. R., Holmyard, J. M., Immink, A. J., Jarrad, D. L., Katoh, E., Langley, J. C., Lee, D. O., Le Vay, L., Leftwich, C. P., Mitchell, M., Moore, A., Murray, A. G., McLaren, E. M., Norbury, H., Parker, D., Parry, S. O., Purchase, D., Rahman, A., Sanver, F., Siggs, M., Simpson, S. D., Slaski, R. J., Smith, K., Syvret, M. L., Tibbott, C., Thomas, P. C., Turnbull, J., Whiteley, R., Whittles, M., Wilcockson, M. J., Wilson, J., Dicks, L. V. & Sutherland, W. J., 4 Jul 2014, In: Fish and Fisheries. 16, 4, p. 668–683

    Research output: Contribution to journal › Article › peer-review

  43. Published

    The carbon footprint of lamb: Sources of variation and opportunities for mitigation

    Jones, A. K., Jones, D. L. & Cross, P., 1 Jan 2014, In: Agricultural Systems. 123, p. 97-107

    Research output: Contribution to journal › Article › peer-review

  44. Published

    The carbon footprint of UK sheep production: current knowledge and opportunities for reduction in temperate zones

    Jones, A. K., Jones, D. L. & Cross, P., Apr 2014, In: Journal of Agricultural Science. 152, 2, p. 288-308

    Research output: Contribution to journal › Article › peer-review

  45. Published

    Informing decision making in agricultural greenhouse gas mitigation policy: A Best-Worst Scaling survey of expert and farmer opinion in the sheep industry

    Jones, A. K., Jones, D., Edwards-Jones, G. & Cross, P., May 2013, In: Environmental Science and Policy. 29, p. 46-56

    Research output: Contribution to journal › Article › peer-review

  46. Published

    Developing farm-specific marginal abatement cost curves: Cost-effective greenhouse gas mitigation opportunities in sheep farming systems

    Jones, A. K., Jones, D. L. & Cross, P., 12 Sept 2015, In: Land Use Policy. 49, p. 394-403

    Research output: Contribution to journal › Article › peer-review

  47. Published

    A re-investigation of the mycolic acids of Mycobacterium avium

    Jones, A., Lee, O. Y-C., Minnikin, D. E., Baird, M. S. & Al Dulayymi, J. R., Aug 2020, In: Chemistry and Physics of Lipids. 230, 104928.

    Research output: Contribution to journal › Article › peer-review

  48. Published

    New synthetic lipid antigens for rapid serological diagnosis of tuberculosis

    Jones, A., Pitts, M., Al-Dulayymi, J., Gibbons, J., Ramsay, A., Goletti, D., Gwenin, C. & Baird, M., 14 Aug 2017, In: PLoS ONE. 12, 8, e0181414.

    Research output: Contribution to journal › Article › peer-review

  49. Published

    Elevated serum antibody responses to synthetic mycobacterial lipid antigens among UK farmers: an indication of exposure to environmental mycobacteria?

    Jones, A., Davies, C., Al-Dulayymi, J., Gwenin, C., Gibbons, J., Williams, P. & Baird, M., 1 Feb 2021, In: RSC Medicinal Chemistry. 12, 2, p. 213-221 9 p.

    Research output: Contribution to journal › Article › peer-review

  50. Published

    Restaurant Cooking Trends and Increased Risk for Campylobacter Infection

    ENIGMA Consortium, 1 Jul 2016, In: Emerging Infectious Diseases. 22, 7

    Research output: Contribution to journal › Article › peer-review

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