Research Portal

School of Environmental & Natural Sciences

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  1. Published

    Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, as revealed by a combination of cultivation-based and cultivation-independent techniques.

    Johnson, D. B., Kimura, S., Hallberg, K. B., Querellou, J. (Editor) & Lamy, C. (Editor), 1 Jan 2006, p. 139.

    Research output: Contribution to conference › Paper

  2. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journal › Article › peer-review

  3. Published
  4. Published

    Concentrate mineralogy dictates the composition of bioleaching mineral consortia

    Johnson, D. B., Yajie, L., Okibe, N., Coupland, K. & Hallberg, K. B., 1 Jan 2007, In: Advanced Materials Research. 20-21, p. 403-404

    Research output: Contribution to journal › Article › peer-review

  5. Published

    Physiology and ecology of acidophilic microorganisms.

    Johnson, D. B., Gerday, C. (Editor) & Glansdorff, N. (Editor), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  6. Published

    Biodiversity of acidophilic moderate thermophiles isolated from two sites in Yellowstone National Park, and their roles in the dissimilatory oxido-reduction of iron.

    Johnson, D. B., Body, D. A., Bridge, T. A., Bruhn, D. F., Roberto, F. F., Reysenbach, A. L. (Editor), Voytek, M. (Editor) & Mancinelli, R. (Editor), 1 Jan 2001, Thermophiles: Biodiversity: Ecology and Evolution. 2001 ed. Kluwer Academic/Plenum Publishers, p. 23-39

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  7. Published

    Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis

    Johnson, D. B., Okibe, N. & Hallberg, K. B., 1 Mar 2005, In: Journal of Microbiological Methods. 60, 3, p. 299-313

    Research output: Contribution to journal › Article › peer-review

  8. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (Editor) & Garcia Jr, O. (Editor), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  9. Published

    Sulfidogenesis at low pH: a novel approach for bioremediating acid rock drainage and recovering soluble metals.

    Johnson, D. B., Rowe, O. F., Kimura, S. & Hallberg, K. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

  10. Published

    Developing Sustainable Biotechnologies for Mine Water Treatment in the 21st Century

    Johnson, B., Santos, A. L., Falagan, C., Jones, R. M., Grail, B. M., Holanda, R. & Hedrich, S., Jul 2016, Procddings IMWA 2016. p. 782-789

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  11. Published
  12. Published

    Dissolved Organic Matter in Freshwater Ecosystems: Nature, Origins and Ecological Significance

    Johnes, P. (Editor), Evershed, R. P. (Editor), Jones, D. L. (Editor) & Maberly, S. C. (Editor), 2023, Springer.

    Research output: Book/Report › Book › peer-review

  13. Published

    The roles of allopatric divergence and natural selection in quantitative trait variation across a secondary contact zone in the lizard Anolis roquet.

    Johansson, H., Surget-Groba, Y. & Thorpe, R. S., 1 Dec 2008, In: Molecular Ecology. 17, 23, p. 5146-5156

    Research output: Contribution to journal › Article › peer-review

  14. Published

    Development of microsatellite markers in the St Lucia anole, Anolis luciae.

    Johansson, H., Surget-Groba, Y., Gow, J. L. & Thorpe, R. S., 1 Nov 2008, In: Molecular Ecology Resources. 8, 6, p. 1408-1410

    Research output: Contribution to journal › Article › peer-review

  15. Published

    Microsatellite data show evidence for male-biased dispersal in the Caribbean lizard Anolis roquet.

    Johansson, H., Surget-Groba, Y. & Thorpe, R. S., 1 Oct 2008, In: Molecular Ecology. 17, 20, p. 4425-4432

    Research output: Contribution to journal › Article › peer-review

  16. Published

    Protecting stable biological nomenclatural systems enables universal communication: A collective international appeal

    1558 additional coauthors, Jul 2024, In: BioScience. 74, 7, p. 467-472 6 p.

    Research output: Contribution to journal › Article › peer-review

  17. Published

    Mismatch between molecular (mtDNA) and morphological classification of Macrobrachium prawns from Southern Nigeria: Cryptic freshwater species and brackish water morphotypes

    Jimoh, A. A., Anetekhai, M. A., Cummings, S., Abanikanda, O. T., Turner, G. F., van Oosterhout, C. & Hanfling, B., 1 Oct 2013, In: Aquaculture. 410-411, p. 25-31

    Research output: Contribution to journal › Article › peer-review

  18. Published

    Mixing and matching: using qualitative methods to improve quantitative impact evaluations (IEs) and systematic reviews (SRs) of development outcomes

    Jimenez, E., Waddington, H., Goel, N., Prost, A., Pullin, A., White, H., Lahiri, S. & Narain, A., 30 Nov 2018, In: Journal of Development Effectiveness. 10, 4, p. 400-421

    Research output: Contribution to journal › Article › peer-review

  19. Published

    Effects of warming and grazing on dissolved organic nitrogen in a Tibetan alpine meadow ecosystem

    Jiang, L., Wang, S., Luo, C., Zhu, X., Kardol, P., Zhang, Z., Li, Y., Wang, C., Wang, Y. & Jones, D., 1 May 2016, In: Soil & Tillage Research. 158, May, p. 156-164

    Research output: Contribution to journal › Article › peer-review

  20. Published

    Abiotic and biotic controls of soil dissolved organic nitrogen along a precipitation gradient on the Tibetan plateau

    Jiang, L., Wang, S., Pang, Z., Wang, C., Meng, F., Lan, Z., Zhou, X., Li, Y., Zhang, Z., Luo, C., Jones, D. L., Rui, Y. & Wang, Y., Feb 2021, In: Plant and Soil. 459, 1-2, p. 65-78

    Research output: Contribution to journal › Article › peer-review

  21. Published

    Effects of grazing on the acquisition of nitrogen by plants and microorganisms in an alpine grassland on the Tibetan plateau

    Jiang, L., Wang, S., Zhe, P., Wang, C., Kardol, P., Zhong, L., Yu, Q., Lan, Z., Wang, Y., Xu, X., Kuzyakov, Y., Luo, C., Zhang, Z. & Jones, D. L., 9 Mar 2017, In: Plant and Soil. 416, 1-2, p. 297-308

    Research output: Contribution to journal › Article › peer-review

  22. Published

    A Modified KNN Method for Mapping the Leaf Area Index in Arid and Semi-Arid Areas of China

    Jiang, F., Smith, A., Kutia, M., Wang, G., Liu, H. & Sun, H., 10 Jun 2020, In: Remote Sensing. 12, 11, 24 p., 1884.

    Research output: Contribution to journal › Article › peer-review

  23. Published

    Plant organic N uptake maintains species dominance under long-term warming

    Jiang, L., Wang, S., Zhe, P., Xu, X., Kardol, P., Li, Y., Zhang, L., Wang, Y., Lei, Z., Lan, Z., Hill, P. W., Zhang, Z., Luo, C., Rui, Y., Ning, D. & Jones, D. L., 25 Oct 2018, In: Plant and Soil. 433, 1-2, p. 243-255

    Research output: Contribution to journal › Article › peer-review

  24. Published

    Trade-off between soil enzyme activities and hotspots area depends on long-term fertilization: In situ field zymography

    Jia, R., Zhou, J., Yang, L., Blagodatskaya, E., Jones, D. L., Razavi, B. S., Yang, Y., Kuzyakov, Y., Zeng, Z. & Zang, H., 1 Dec 2024, In: Science of the Total Environment. 954, p. 176386

    Research output: Contribution to journal › Article › peer-review

  25. Published

    Insights into the associations between soil quality and ecosystem multifunctionality driven by fertilization management: A case study from the North China Plain

    Jia, R., Zhou, J., Chu, J., Shahbaz, M., Yang, Y., Jones, D. L., Zang, H., Razavi, B. S. & Zeng, Z., 15 Aug 2022, In: Journal of Cleaner Production. 362

    Research output: Contribution to journal › Article › peer-review

  26. Published

    Integrating soil testing phosphorus into environmentally based manure management in pen-urban regions: A case study in the Beijing area

    Jia, W., Yan, Z. J., Chadwick, D. R., Kang, L. Y., Duan, Z. Q., Bai, Z. H. & Chen, Q., 2 May 2015, In: Agriculture, Ecosystems and Environment. 209, p. 47-59

    Research output: Contribution to journal › Article › peer-review

  27. Published

    Mobilization of aluminium, iron and silicon by Picea abies and ectomycorrhizas in a forest soil.

    Jentschke, G. W., Van Hees, P. A., Jones, D. L., Jentschke, G. & Godbold, D. L., 1 Mar 2004, In: European Journal of Soil Science. 55, 1, p. 101-111

    Research output: Contribution to journal › Article › peer-review

  28. Published

    Interdependence of phosphorus, nitrogen, potassium and magnesium translocation by the ectomycorrhizal fungus Paxillus involutus.

    Jentschke, G. W., Jentschke, G., Brandes, B., Kuhn, A. J., Schroder, W. H. & Godbold, D. L., 1 Feb 2001, In: New Phytologist. 149, 2, p. 327-337

    Research output: Contribution to journal › Article › peer-review

  29. Published

    The influence of soil acidity and free air carbon dioxide enrichment (POPFACE) on root production and turnover in trees

    Jentschke, G. W., Lukac, M., Van Dam, D., Fritz, H. W., Jentschke, G., Calfapietra, C., Godbold, D. L. & Radoglou, K. (Editor), 1 Jan 2001, Forest research: a challenge for an integrated approach.. 2001 ed. NAGEF, p. 194-200

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  30. Published

    Root turnover and root necromass accumulation of Norway spruce (Picea abies) is affected by soil acidity.

    Jentschke, G. W., Godbold, D. L., Fritz, H. W., Jentschke, G., Meesenburg, H. & Rademacher, P., 1 Sept 2003, In: Tree Physiology. 23, 13, p. 915-921

    Research output: Contribution to journal › Article › peer-review

  31. Published

    Nitrogen limitation in mycorrhizal Norway spruce (Picea abies) seedlings induced mycelial foraging for ammonium: implications for Ca and Mg uptake.

    Jentschke, G. W., Jentschke, G., Godbold, D. L. & Brandes, B., 1 Jul 2001, In: Plant and Soil. 234, 1, p. 109-117

    Research output: Contribution to journal › Article › peer-review

  32. Published

    Organic acid concentrations in soil solution: effects of young coniferous trees and ectomycorrhizal fungi.

    Jentschke, G. W., Van Hees, P. A., Jones, D. L., Jentschke, G. & Godbold, D. L., 1 Apr 2005, In: Soil Biology and Biochemistry. 37, 4, p. 771-776

    Research output: Contribution to journal › Article › peer-review

  33. Published

    Contrasting rooting patterns of some arid-zone fruit tree species from Botswana. I. Fine root distribution.

    Jentschke, G. W., Oppelt, A. L., Kurth, W., Jentschke, G. & Godbold, D. L., 1 Jan 2005, In: Agroforestry Systems. 64, 1, p. 1-11

    Research output: Contribution to journal › Article › peer-review

  34. Published

    Does soil acidity reduce subsoil rooting in Norway spruce (Picea abies)?

    Jentschke, G. W., Jentschke, G., Drexhage, M., Fritz, H. W., Fritz, E., Schella, B., Lee, D. H., Gruber, F., Heimann, J., Kuhr, M., Schmidt, J., Schmidt, S., Zimmermann, R. & Godbold, D. L., 1 Nov 2001, In: Plant and Soil. 237, 1, p. 91-108

    Research output: Contribution to journal › Article › peer-review

  35. Published

    Contribution of root turnover to nutrient cycling in beech forest.

    Jentschke, G. W., Wu, K. H., Jentschke, G., Godbold, D. L., Horst, W. W. (Editor), Sattelmacher, B. (Editor), Schmidhalter, U. (Editor), Schubert, S. (Editor), Von Wiren, N. (Editor), Wittenmayer, L. (Editor), Schenk, M. K. (Editor), Burkert, A. (Editor), Claassen, N. (Editor) & Flessa, H. (Editor), 1 Jan 2001, Plant nutrition - food security and sustainability of agro-ecosystems through applied and basic research.. 2001 ed. Kluwer Academic Publishers, p. 916-917

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  36. Published

    The status of the world's land and marine mammals: diversity, threat, and knowledge.

    Jenkins, R., Schipper, J., Chanson, J. S., Chiozza, F., Cox, N. A., Hoffman, M., Katariya, V., Lamoreux, J., Rodrigues, A. S., Stuart, S. N., Temple, H. J., Baille, J., Boitani, L., Lacher, T. E., Mittermeier, R. A., Smith, A. T., Absolon, D., Aguiar, J. M., Amori, G., Bakkour, N., Baldi, R., Berridge, R. J., Bielby, J., Black, P. A., Blanc, J. J., Brooks, T. M., Burton, J. A., Butynski, T. M., Catullo, G., Chapman, R., Cokeliss, Z., Collen, B., Conroy, J., Cooke, J. G., Da Fonseca, G. A., Derocher, A. E., Dublin, H. T., Duckworth, J. W., Emmons, L., Emslie, R. H., Festa-Biancet, M., Foster, M., Foster, S., Garshelis, D. L., Gates, C., Gimenez-Dixon, M., Gonzalez, S., Gonzalez-Maya, J., Good, T. C., Hammerson, G., Hammond, P. S., Happold, D., Happold, M., Hare, J., Harris, R. B., Hawkins, C. E., Haywood, M., Heaney, L. R., Hedges, S., Helgen, K. M., Hilton-Taylor, C., Hussain, S. A., Ishii, N., Jefferson, T. A., Jenkins, R. K., Johnston, C. H., Keith, M., Kingdon, J., Knox, D. H., Kovacs, K. M., Langhammer, P., Leus, K., Lewison, R., Lichtenstein, G., Lowry, L. F., Macavoy, Z., Mace, G. M., Mallon, D. P., Masi, M., McKnight, M. W., Medellin, R. A., Medici, P., Mills, G., Moehlman, P. D., Molur, S., Mora, A., Nowell, K., Oates, J. F., Olech, W., Oliver, W. R., Opera, M., Patterson, B. D., Perrin, W. F., Polidoro, B. A., Pollock, C., Powel, A., Protas, Y., Racey, P., Ragle, J., Ramani, P., Rathbun, G., Reeves, R. R., Reilly, S. B., Reynolds, J. E., Rondinini, C., Rosell-Ambal, R. G., Rulli, M., Rylands, A. B., Savini, S., Schank, C. J., Sechrest, W., Self-Sullivan, C., Shoemaker, A., Sillero-Zubiri, C., De Silva, N., Smith, D. E., Srinivasulu, C., Stephenson, P. J., Van Strien, N., Talukdar, B. K., Taylor, B. L., Timmins, R., Tirira, D. G., Tognelli, M. F., Tsytsulina, K., Veiga, L. M., Vie, J. C., Williamson, E. A., Wyatt, S. A., Xie, Y. & Young, B. E., 10 Oct 2008, In: Science. 322, 5899, p. 225-230

    Research output: Contribution to journal › Article › peer-review

  37. Published

    Hunting and consumption of mammals and birds by people in urban areas of western Madagascar.

    Jenkins, R., Randrianandrianina, F. H., Racey, P. A. & Jenkins, R. K., 1 Jul 2010, In: Oryx. 44, 3, p. 411-415

    Research output: Contribution to journal › Article › peer-review

  38. Published

    Long-term monitoring of tropical bats for anthropogenic impact assessment: gauging the statistical power to detect populations change.

    Jenkins, R., Meyer, C. F., Aguiar, L. M., Aguirre, L. F., Baumgarten, J., Clarke, F. M., Cosson, J. F., Estrada, S., Villegas, S. E., Fahr, J., Faria, D., Furey, N., Henry, M., Hodgkinson, R., Jenkins, R. K., Jung, K. G., Kingston, T., Kunz, T. H., MacSwiney Gonzalez, M. C., Moya, I., Pons, J. M., Racey, P. A., Rex, K., Sampaio, E. M., Stoner, K. E., Voigt, C. C., Von Staden, D., Weise, C. D. & Kalko, E. K., 1 Nov 2010, In: Biological Conservation. 143, 11, p. 2797-2807

    Research output: Contribution to journal › Article › peer-review

  39. Published

    Characterization of 22 microsatellite marker loci in the Madagascar rousette (Rousettus madagascariensis).

    Jenkins, R., Andrianaivoarivelo, A. R., Shore, G. D., McGuire, S. M., Jenkins, R. K., Ramilijaona, O., Louis, E. E. & Brenneman, R. A., 1 Aug 2009, In: Conservation Genetics. 10, 4, p. 1025-1028

    Research output: Contribution to journal › Article › peer-review

  40. Published

    Prudent female allocation by modular hermaphrodites: female investment is promoted by the opportunity to outcross in cyclostome bryozoans

    Jenkins, H. L., Bishop, J. D. & Hughes, R. N., 7 Aug 2015, In: Biological Journal of the Linnean Society. 116, 3, p. 593-602

    Research output: Contribution to journal › Article › peer-review

  41. Published

    Analysis of Patterns of Bushmeat Consumption Reveals Extensive Exploitation of Protected Species in Eastern Madagascar

    Jenkins, R., Keane, A., Rakotoarivelo, A. R., Rakotomboavonjy, V., Randrianandrianina, F. H., Razafimanahaka, H. J., Ralaiarimalala, S. R. & Jones, J. P. G., 14 Dec 2011, In: PLoS ONE. 6, 12, p. e27570

    Research output: Contribution to journal › Article › peer-review

  42. Published

    A GAL4-Driver Line Resource for Drosophila Neurobiology

    Jenett, A., Rubin, G., Ngo, T. T. B., Shepherd, D., Murphy, C., Dionne, H., Pfeiffer, B., Cavallaro, A., Hall, D., Jeter, J., Iyer, N., Fetter, D., Hausenfluck, J., Peng, H., Trautman, E. T., Svirskas, R. R., Meyers, E. W., Iwinski, Z. R., Aso, Y., DePasquale, G. M., Enos, A., Hulamm, P., Lam, S. C. B., Li, H.-H., Laverty, T., Long, F., Qu, L., Murphy, S. D., Rokicki, C., Safford, T., Shaw, K., Simpson, J. H., Sowell, A., Tae, S., Yu, Y. & Zugates, C. T., 11 Oct 2012, In: Cell Reports. 2, 4, p. 991-1001 10 p.

    Research output: Contribution to journal › Article › peer-review

  43. Published

    Seed predation by insects across a tropical forest precipitation gradient

    Jeffs, C. T., Kennedy, P., Griffith, P., Gripenberg, S., Markesteijn, L. & Lewis, O. T., Dec 2018, In: Ecological Entomology. 43, 6, p. 813-822

    Research output: Contribution to journal › Article › peer-review

  44. Published

    Breeding habitat loss linked to declines in Rufous Hummingbirds

    Jefferys, K. M., Betts, M. G., Robinson, W. D., Curtis, J. R. F., Hallman, T., Smith, A. C., Stevens, C. & Aguirre-Gutierrez, J., Aug 2024, In: Avian Conservation and Ecology. 19, 2, 26 p., 2.

    Research output: Contribution to journal › Article › peer-review

  45. Published

    Ranking current and prospective NO2 pollution mitigation strategies: An environmental and economic modelling investigation in Oxford Street, London

    Jeanjean, A. P. R., Gallagher, J., Monks, P. S. & Leigh, R. J., Jun 2017, In: Environmental Pollution. 225, p. 587-597

    Research output: Contribution to journal › Article › peer-review

  46. Published

    Fruit trees and herbaceous plants increase functional and phylogenetic diversity of birds in smallholder rubber plantations

    Jayathilake, H. M., Warren-Thomas, E., Nelson, L., Dolman, P., Bumrungsri, S., Juthong, W., Carrasco, L. R. & Edwards, D. P., May 2021, In: Biological Conservation. 257, 109140.

    Research output: Contribution to journal › Article › peer-review

  47. Published

    Response of the transmission spectrum of tapered optical fibres to the deposition of a nanostructured coating.

    Jarzebinska, R., Cheung, C. S., James, S. W., Ashwell, G. J. & Tatam, R. P., 1 Jan 2008, p. L45.

    Research output: Contribution to conference › Paper

  48. Published

    Streamwater phosphorus and nitrogen across a gradient in rural-agricultural land use intensity.

    Jarvie, H. P., Withers, P. J., Bowes, M. J., Palmer-Felgate, E. J., Harper, D. M., Wasiak, K., Wasiak, P., Hodgkinson, R. A., Bates, A., Stoate, C., Neal, M., Wickham, H. D., Harman, S. A. & Armstrong, L. K., 1 Feb 2010, In: Agriculture, Ecosystems and Environment. 135, 4, p. 238-252

    Research output: Contribution to journal › Article › peer-review

  49. Published

    Quantifying Phosphorus retention and release in rivers and watersheds using extended end-member mixing analysis (E-EMMA).

    Jarvie, H. P., Neal, C., Withers, P. J., Baker, D. B., Richards, R. P. & Sharpley, A. N., 1 Mar 2011, In: Journal of Environmental Quality. 40, 2, p. 492-504

    Research output: Contribution to journal › Article › peer-review

  50. Published

    Host Plant Effects on Sexual Selection Dynamics in Phytophagous Insects

    Jarrett, B. & Miller, C., 1 Jan 2024, In: Annual Review of Entomology. 69, p. 41-57

    Research output: Contribution to journal › Article › peer-review

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