Executing multi-taxa eDNA ecological assessment via traditional metrics and interactive networks

Seymour, M., Edwards, F., Cosby, B., Kelly, M., de Bruyn, M., Carvalho, G. & Creer, S., 10 Aug 2020, In: Science of the Total Environment. 729, 138801.

Research output: Contribution to journal › Article › peer-review

Experimental harvesting of fish populations drives genetically based shifts in body size and maturation

Van Wijk, S. J., van Wijk, S. J., Taylor, M. I., Creer, S., Dreyer, C., Rodrigues, F. M., Ramnarine, I. W., van Oosterhout, C. & Carvalho, G. R., 1 May 2013, In: Frontiers in Ecology and the Environment. 11, 4, p. 181–187

Research output: Contribution to journal › Article › peer-review

Extensive population subdivision of the cuttlefish Sepia officinalis (Mollusca : Cephalopoda) around the Iberian Peninsula indicated by microsatellite DNA variation.

Perez-Losada, M., Guerra, A., Carvalho, G. R., Sanjuan, A. & Shaw, P. W., 1 Dec 2002, In: Heredity. 89, 6, p. 417-424

Research output: Contribution to journal › Article › peer-review

Faunal histories from Holocene ancient DNA

De Bruyn, M., de Bruyn, M., Hoelzel, A. R., Carvalho, G. R. & Hofreiter, M., 1 Aug 2011, In: Trends in Ecology and Evolution. 26, 8, p. 405-413

Research output: Contribution to journal › Article › peer-review

Fish Product Mislabelling: Failings of Traceability in the Production Chain and Implications for Illegal, Unreported and Unregulated (IUU) Fishing

De Bruyn, M., Helyar, S. J., Lloyd, H., de Bruyn, M., Leake, J., Bennett, N. & Carvalho, G. R., 12 Jun 2014, In: PLoS ONE. 9, 6, p. e98691

Research output: Contribution to journal › Article › peer-review

Gene-associated markers can assign origin in a weakly structured fish, Atlantic herring

Bekkevold, D., Helyar, S. J., Limborg, M. T., Nielsen, E. E., Hemmer-Hansen, J., Clausen, L. A. & Carvalho, G. R., 23 Feb 2015, In: ICES Journal of Marine Science. 72, 6, p. 1790-1810

Research output: Contribution to journal › Article › peer-review

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Taylor, M. I., Nielsen, E. E., Cariani, A., Aoidh, E. M., Maes, G. E., Milano, I., Ogden, R., Taylor, M., Hemmer-Hansen, J., Babbucci, M., Bargelloni, L., Bekkevold, D., Diopere, E., Grenfell, L., Helyar, S., Limborg, M. T., Martinsohn, J. T., McEwing, R., Panitz, F., Patarnello, T., Tinti, F., Van Houdt, J. K., Volckaert, F. A., Waples, R. S., FishPopTrace consortium, [. V. & Carvalho, G. R., 22 May 2012, In: Nature Communications. 3, p. Article No. 851

Research output: Contribution to journal › Article › peer-review

Genetic homogeneity among breeding grounds and nursery areas of an exploited Lake Malawi cichlid fish.

Genner, M. J., Nichols, P., Shaw, P. W., Carvalho, G. R., Robinson, R. L. & Turner, G. F., 1 Sept 2008, In: Freshwater Biology. 53, 9, p. 1823-1831

Research output: Contribution to journal › Article › peer-review

Genetic population structure indicates sympatric speciation of Lake Malawi pelagic cichlids.

Shaw, P. W., Turner, G. F., Idid, M. R., Robinson, R. L. & Carvalho, G. R., 22 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1459, p. 2273-2280

Research output: Contribution to journal › Article › peer-review

Genetic structure of Carcinus maenas within its native range: larval dispersal and oceanographic variability.

Domingues, C. P., Creer, S., Taylor, M. I., Queiroga, H. & Carvalho, G. R., 14 Jul 2010, In: Marine Ecology Progress Series. 410, p. 111-123

Research output: Contribution to journal › Article › peer-review

Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua).

Nielsen, E. E., Hemmer-Hansen, J., Poulsen, N. A., Loeschcke, V., Moen, T., Johansen, T., Mittelholzer, C., Taranger, G. L., Ogden, R. & Carvalho, G. R., 1 Dec 2009, In: BMC Evolutionary Biology. 9, p. 276

Research output: Contribution to journal › Article › peer-review

Haplotype frequency distribution and discriminatory power of two mtDNA fragments in a marine pelagic teleost (Atlantic herring, Clupea harengus)

Hauser, L., Turan, C. & Carvalho, G. R., 1 Dec 2001, In: Heredity. 87, 6, p. 621-630

Research output: Contribution to journal › Article › peer-review

Heterogeneous evolution of microsatellites revealed by reconstruction of recent mutation history in an invasive apomictic snail, Potamopyrgus antipodarum

Weetman, D., Hauser, L. & Carvalho, G. R., 1 May 2006, In: Genetica. 127, 1-3, p. 285-293

Research output: Contribution to journal › Article › peer-review

High-resolution modelling of the shelf and open ocean adjacent to South Georgia, Southern Ocean

Young, E. F., Meredith, M. P., Murphy, E. J. & Carvalho, G. R., 16 Dec 2010, In: Deep Sea Research II: Topical Studies in Oceanography.

Research output: Contribution to journal › Article › peer-review

Inbreeding depression and genetic load of sexually selected traits: how the guppy lost its spots.

Van Oosterhout, C., Trigg, R. E., Carvalho, G. R., Magurran, A. E., Hauser, L. & Shaw, P. W., 1 Mar 2003, In: Journal of Evolutionary Biology. 16, 2, p. 273-281

Research output: Contribution to journal › Article › peer-review

Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

da Silva, J. M., dos Santos, A., Cunha, M. R., Costa, F. O., Creer, S. & Carvalho, G. R., 1 Jun 2013, In: Marine Ecology. 34, 2, p. 157-170

Research output: Contribution to journal › Article › peer-review

Isolation and characterization of 28 new microsatellite markers for European flounder (Platichthys flesus L.)

Tysklind, N., Neuparth, T., Ashcroft, G. R., Taylor, M. I., Lyons, B. P., McCarthy, I. D. & Carvalho, G. R., 1 May 2009, In: Molecular Ecology Resources. 9, 3, p. 1065-1068

Research output: Contribution to journal › Article › peer-review

Isolation and characterization of di- and trinucleotide microsatellites in the freshwater snail Potamopyrgus antipodarum.

Weetman, D., Hauser, L. & Carvalho, G. R., 1 Sept 2001, In: Molecular Ecology Notes. 1, 3, p. 185-187

Research output: Contribution to journal › Article › peer-review

Isolation and characterization of microsatellites in the bryozoan Crisia denticulata

Craig, S. F., D'Amato, M. E., Harley, M., Bishop, J., Hughes, R. N. & Carvalho, G., 1 Dec 2001, In: Molecular Ecology Notes. 1, 4, p. 281-282

Research output: Contribution to journal › Article › peer-review

Isolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalis aradensis (Cyprinidae)

Mesquita, N., Cunha, C., Hanfling, B., Carvalho, G. R., Ze-Ze, L., Tenreiro, R. & Coelho, M. M., 1 Dec 2003, In: Molecular Ecology Notes. 3, 4, p. 572-574

Research output: Contribution to journal › Article › peer-review

Late glacial history of the cold-adapted freshwater fish Cottus gobio, revealed by microsatellites.

Hanfling, B., Hellemans, B., Volckaert, F. A. & Carvalho, G. R., 1 Sept 2002, In: Molecular Ecology. 11, 9, p. 1717-1729

Research output: Contribution to journal › Article › peer-review

Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper.

Hauser, L., Adcock, G. J., Smith, P. J., Ramirez, J. H. & Carvalho, G. R., 1 Sept 2002, In: Proceedings of the National Academy of Sciences of the USA. 99, 18, p. 11742-11747

Research output: Contribution to journal › Article › peer-review

Macro- and micro-geographic variation in pantophysin (Panl) allele frequencies in NE Atlantic cod Gadus morhua

Case, R. A., Hutchinson, W. F., Hauser, L., Van Oosterhout, C. & Carvalho, G. R., 11 Oct 2005, In: Marine Ecology Progress Series. 301, p. 267-278

Research output: Contribution to journal › Article › peer-review

Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species

Holman, L. E., Parker-Nance, S., de Bruyn, M., Creer, S., Carvalho, G. & Rius, M., 14 Mar 2022, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 377, 1846, 20210025.

Research output: Contribution to journal › Article › peer-review

Marked genetic structuring in localised spawning populations of cod Gadus morhua in the North Sea and adjoining waters, as revealed by microsatellites.

Hutchinson, W. F., Carvalho, G. R. & Rogers, S. I., 28 Nov 2001, In: Marine Ecology Progress Series. 223, p. 251-260

Research output: Contribution to journal › Article › peer-review

Mating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon.

Gomez, A., Wright, P. J., Lunt, D. H., Cancino, J. M., Carvalho, G. R. & Hughes, R. N., 22 Jan 2007, In: Proceedings of The Royal Society B - Biological Sciences. 274, 1607, p. 199-207

Research output: Contribution to journal › Article › peer-review

Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes

Fonseca, V. G., Carvalho, G. R., Nichols, B., Quince, C., Johnson, H. F., Neill, S. P., Lambshead, J. D., Thomas, W. K., Power, D. M. & Creer, S., 25 Aug 2014, In: Global Ecology and Biogeography. 23, 11, p. 1293–1302

Research output: Contribution to journal › Article › peer-review

Micro- and macrogeographic genetic structure in bryozoans with different larval strategies.

Porter, J. S., Ryland, J. S. & Carvalho, G. R., 24 Jun 2002, In: Journal of Experimental Marine Biology and Ecology. 272, 2, p. 119-130

Research output: Contribution to journal › Article › peer-review

Microsatellite analysis of genetic population structure of the endangered cyprinid Anaecypris hispanica in Portugal: implications for conservation.

Salgueiro, P., Carvalho, G. R., Collares-Pereira, M. J. & Coelho, M. M., 1 Jan 2003, In: Biological Conservation. 109, 1, p. 47-56

Research output: Contribution to journal › Article › peer-review

Mitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina

Gomez, A., Hughes, R. N., Wright, P. J., Carvalho, G. R. & Lunt, D. H., 1 May 2007, In: Molecular Ecology. 16, 10, p. 2173-2188

Research output: Contribution to journal › Article › peer-review

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors

Yetsko, K., Farrell, J., Blackburn, N. B., Whitmore, L., Stammnitz, M. R., Whilde, J., Eastman, C., Ramia, D. R., Thomas, R., Krstic, A., Linser, P., Creer, S., Carvalho, G., Devlin, M. A., Nahvi, N., Leandro, A. C., deMaar, T. W., Burkhalter, B., Murchison, E. P., Schnitzler, C. & Duffy, D., 1 Feb 2021, In: Communications Biology. 4, 1, 152.

Research output: Contribution to journal › Article › peer-review

Molecular genetic analysis of Daphnia in the English Lake District: species identity, hybridisation and resting egg banks.

Reid, V. A., Carvalho, G. R. & George, D. G., 1 Jun 2000, In: Freshwater Biology. 44, 2, p. 247-253

Research output: Contribution to journal › Article › peer-review

Molecular phylogeny supports division of the 'cosmopolitan' taxon Celleporella (Bryozoa; Cheilostomata) into four major clades.

Hughes, R. N., Gomez, A., Wright, P. J., Moyano, H. I., Cancino, J. M., Carvalho, G. R. & Lunt, D. H., 1 Jan 2008, In: Molecular Phylogenetics and Evolution. 46, 1, p. 369-374

Research output: Contribution to journal › Article › peer-review

Molecular sexing of African rhinoceros.

Peppin, L., McEwing, R., Ogden, R., Hermes, R., Harper, C., Guthrie, A. & Carvalho, G. R., 1 Jun 2010, In: Conservation Genetics. 11, 3, p. 1181-1184

Research output: Contribution to journal › Article › peer-review

Morphological and genetic adaptation to a lagoon environment: a case study in the bryozoan genus Alcyonidium

Porter, J. S., Dyrynda, P. E., Ryland, J. S. & Carvalho, G. R., 1 Sept 2001, In: Marine Biology. 139, 3, p. 575-585

Research output: Contribution to journal › Article › peer-review

No loss of genetic diversity in the exploited and recently collapsed population of Bay of Biscay anchovy (Engraulis encrasicolus, L.)

Montes, I., Irondo, M., Manzano, C., Santos, M., Conklin, D., Carvalho, G., Irigoien, X. & Estonba, A., May 2016, In: Marine Biology. 163, 98.

Research output: Contribution to journal › Article › peer-review

Novel Tools for Conservation Genomics: Comparing Two High-Throughput Approaches for SNP Discovery in the Transcriptome of the European Hake

Milano, I., Babbucci, M., Panitz, F., Ogden, R., Nielsen, R. O., Taylor, M. I., Helyar, S. J., Carvalho, G. R., Espiñeira, M., Atanassova, M., Tinti, F., Mae, G. E., Patarnello, T. & Bargelloni, L., 22 Nov 2011, In: PLoS ONE. 6, 11, p. e28008

Research output: Contribution to journal › Article › peer-review

Oceanography and life history predict contrasting genetic population structure in two Antarctic fish species

Young, E. F., Belchier, M., Hauser, L., Horsburgh, G. J., Meredith, M. P., Murphy, E. J., Pascoal, S., Rock, J., Tysklind, N. & Carvalho, G. R., 16 Apr 2015, In: Evolutionary Applications. 8, 5, p. 486-509

Research output: Contribution to journal › Article › peer-review

Outlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius)

Milano, I., Babbucci, M., Cariani, A., Atanassova, M., Bekkevold, D., Carvalho, G., Espineira, M., Fiorentino, F., Garofalo, G., Geffen, A., Hansen, J. H., Helyar, S. J., Nielsen, E. E., Ogden, R., Patarnello, T., Stagioni, M., Tinti, F. & Bargelloni, L., 18 Nov 2013, In: Molecular Ecology. 23, 1, p. 118-135

Research output: Contribution to journal › Article › peer-review

Paleo-Drainage Basin Connectivity Predicts Evolutionary Relationships across Three Southeast Asian Biodiversity Hotspots

De Bruyn, M., de Bruyn, M., Rüber, L., Nylinder, S., Stelbrink, B., Lovejoy, N. R., Lavoué, S., Tan, H. H., Nugroho, E., Wowor, D., Ng, P. K., Azizah, M. N., Von Rintelen, T., Hall, R. & Carvalho, G. R., 1 May 2013, In: Systematic Biology. 62, 3, p. 398-410

Research output: Contribution to journal › Article › peer-review

Paradigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts.

Hauser, L. & Carvalho, G. R., 1 Dec 2008, In: Fish and Fisheries. 9, 4, p. 333-362

Research output: Contribution to journal › Article › peer-review

Paradoxical polyembryony? Embryonic cloning in an ancient order of marine bryozoans

Hughes, R. N., D'Amato, M. E., Bishop, J. D., Carvalho, G. R., Craig, S. F., Hansson, L. J., Harley, M. A. & Pemberton, A. J., 22 Jun 2005, In: Biology Letters. 1, 2, p. 178-180

Research output: Contribution to journal › Article › peer-review

Parasitism perturbs the mucosal microbiome of Atlantic Salmon

Llewellyn, M. S., Leadbeater, S., Garcia, C., Sylvain, F.-E., Custodio, M., Ang, K. P., Powell, F., Carvalho, G., Creer, S., Elliot, J. & Derome, N., 2017, In: Scientific Reports. 7, 43465.

Research output: Contribution to journal › Article › peer-review

Patterns of self compatibility, inbreeding depression, outcrossing, and sex allocation in a marine bryozoan suggest the predominating influence of sperm competition.

Hughes, R. N., Wright, P. J., Carvalho, G. R. & Hutchinson, W. F., 1 Nov 2009, In: Biological Journal of the Linnean Society. 98, 3, p. 519-531

Research output: Contribution to journal › Article › peer-review

Performance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples

Bista, I., Carvalho, G., Tang, M., Walsh, K., Zhou, X., Hajibabaei, M., Shokralla, S., Seymour, M., Bradley, D., Liu, S., Christmas, M. & Creer, S., Sept 2018, In: Molecular Ecology Resources. 18, 5, p. 1020-1034

Research output: Contribution to journal › Article › peer-review

Phylogenomics and species delimitation for effective conservation of manta and devil rays

Hosegood, J., Humble, E., Ogden, R., De Bruyn, M., Creer, S., Stevens, G. M. W., Abudaya, M., Bassos-Hull, K., Bonfil, R., Fernando, D., Foote, A., Hipperson, H., Jabado, R. W., Kaden, J., Moazzam, M., Peel, L. R., Pollett, S., Ponzo, A., Poortvliet, M., Salah, J., Senn, H., Stewart, J. D., Wintner, S. & Carvalho, G., Dec 2020, In: Molecular Ecology. 29, 24, p. 4783-4796

Research output: Contribution to journal › Article › peer-review

Phylogeography and regional endemism of a passively dispersing zooplankter: mitochondrial DNA variation in rotiferresting egg banks.

Gomez, A., Carvalho, G. R. & Lunt, D. H., 7 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1458, p. 2189-2197

Research output: Contribution to journal › Article › peer-review

Phylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal

Mesquita, N., Hanfling, B., Carvalho, G. R. & Coelho, M. M., 1 Jun 2005, In: Molecular Ecology. 14, 7, p. 1939-1954

Research output: Contribution to journal › Article › peer-review

Physical and behavioural influences on larval fish retention: contrasting patterns in two Antarctic fishes

Young, E. F., Rock, J., Meredith, M. P., Belchier, M., Murphy, E. J. & Carvalho, G. R., 28 Sept 2012, In: Marine Ecology Progress Series. 465, p. 201-215

Research output: Contribution to journal › Article › peer-review

Plastic and Heritable Components of Phenotypic Variation in Nucella lapillus: An Assessment Using Reciprocal Transplant and Common Garden Experiments

Hughes, R. N., Pascoal, S., Carvalho, G. R., Creer, S., Rock, J., Kawaii, K., Mendo, S. & Hughes, R., 27 Jan 2012, In: PLoS ONE. 7, 1, p. e30289

Research output: Contribution to journal › Article › peer-review