Porth Ymchwil

Dr Johanna Paijmans

Darlithydd mewn Swoleg

Aelodaeth

ORCID: 0000-0002-1938-7052
1 - 45 o blith 45Maint y tudalen: 50
Trefnu yn ôl: Math
  1. Erthygl › Ymchwil › Heb ei adolygu gan gymheiriaid
  2. Cyhoeddwyd

    De Sabeltandkat Homotherium Latidens - Een Onderdeel Van De Laat Pleistocene Mammoetfauna Van Het Noordelijk Halfrond

    Reumer, J. W. F., Folkertsma, R. & Paijmans, J., 2019, Yn: Cranium. 36, 2, t. 5 1 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl

  3. Massive influence of DNA isolation and library preparation approaches on palaeogenomic sequencing data

    Barlow, A., Fortes, G. M. G., Dalen, L., Pinhasi, R., Gasparyan, B., Rabeder, G., Frischauf, C., Paijmans, J. L. A. & Hofreiter, M., 1 Medi 2016, Yn: bioRxiv. t. 075911 1 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl

  4. Erthygl › Ymchwil › Adolygwyd gan gymheiriaid

  5. A mitogenomic timetree for Darwin’s enigmatic “transitional” South American mammal, Macrauchenia patachonica.

    Westbury, M. V., Baleka, S., Barlow, A., Hartmann, S., Paijmans, J., Forasiepi, A. M., Kramarz, A., Bond, M., Gelfo, J. N., Gelfo, J. N., Reguero, M. A., Lopez-Mendoza, P., Taglioretti, M., Scaglia, F., Rinderknecht, A., Jones, W., Mena, F., Billet, G., de Muizon, C., Aguilar, J. L., Mac Phee, R. D. E. & Hofreiter, M., 27 Gorff 2017, Yn: Nature Communications. 15951.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  6. Cyhoeddwyd

    African and Asian leopards are highly differentiated at the genomic level

    Paijmans, J., Barlow, A., Becker, M. S., Cahill, J. A., Fickel, J., Forster, D. W. G., Gries, K., Hartmann, S., Havmoller, R. W., Henneberger, K., Kern, C., Kitchener, A. C., Lorenzen, E. D., Mayer, F., O'Brien, S. J., von Seth, J., Sinding, M.-H. S., Spong, G., Uphyrkina, O., Wachter, B., Westbury, M. V., Dalén, L., Bhak, J., Manica, A. & Hofreiter, M., 10 Mai 2021, Yn: Current Biology.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  7. Cyhoeddwyd

    Ancestral mitogenome capture of the Southeast Asian banded linsang.

    Paijmans, J., Barlow, A., Henneberger, K., Fickel, J., Hofreiter, M. & Foerster, D. W. G., 30 Meh 2020, Yn: PLoS ONE.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  8. Cyhoeddwyd

    Ancient DNA from the Asiatic Wild Dog (Cuon alpinus) from Europe

    Taron, U. H., Paijmans, J., Barlow, A., Preick, M., Lyengar, A., Dragusin, V., Vasile, S., Marciszak, A., Roblickova, M. & Hofreiter, M., 22 Ion 2021, Yn: Genes.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  9. Ancient DNA reveals twenty million years of aquatic life in beavers.

    Xenikoudakis, G., Ahmed, M., Harris, J. C., Wadleigh, R., Paijmans, J., Hartmann, S., Barlow, A., Learner, H. & Hofreiter, M., 3 Chwef 2020, Yn: Current Biology. t. 95-111

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  10. Clovis Age Western Stemmed Projectile Points and Human Coprolites at the Paisley Caves

    Jenkins, D. L., Davis, L. G., Stafford, T. W., Campos, P. F., Hockett, B., Jones, G. T., Cummings, L. S., Yost, C., Connolly, T. J., Yohe, R. M., Gibbons, S. C., Raghavan, M., Rasmussen, M., Paijmans, J. L. A., Hofreiter, M., Kemp, B. M., Barta, J. L., Monroe, C., Gilbert, M. T. P. & Willerslev, E., 13 Gorff 2012, Yn: Science. 337, 6091, t. 223-228 6 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  11. Complex admixture preceded and followed the extinction of wisent in the wild.

    Wecek, K., Hartmann, S., Paijmans, J., Taron, U. H., Xenikoudakis, G., Cahill, J. A., Heintzman, P. D., Shapiro, B., Baryshnikov, G., Bunevich, A. N., Crees, J. J., Dobosz, R., Manaserian, N., Okarma, H., Tokarska, M., Turvey, S., Wojcik, J. M., Zyla, W., Szymura, J. M., Hofreiter, M. & Barlow, A., 1 Maw 2017, Yn: Molecular Biology and Evolution. 34, 7, t. 598-612

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  12. Consensify: A Method for Generating Pseudohaploid Genome Sequences from Palaeogenomic Datasets with Reduced Error Rates.

    Barlow, A., Hartmann, S., Gonzalez, J., Hofreiter, M. & Paijmans, J., 2 Ion 2020, Yn: Genes. 11, 1

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  13. Cyhoeddwyd

    Diversity and Paleodemography of the Addax (Addax nasomaculatus), a Saharan Antelope on the Verge of Extinction

    Hempel, E., Westbury, M. V., Grau, J. H., Trinks, A., Paijmans, J., Kliver, S., Barlow, A., Mayer, F., Muller, J., Chen, L., Koepfli, K.-P., Hofreiter, M. & Bibi, F., 11 Awst 2021, Yn: Genes. 12, 8

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  14. Emergence of a Chimeric Globin Pseudogene and Increased Hemoglobin Oxygen Affinity Underlie the Evolution of Aquatic Specializations in Sirenia

    Signore, A. V., Paijmans, J. L. A., Hofreiter, M., Fago, A., Weber, R. E., Springer, M. S. & Campbell, K. L., 1 Meh 2019, Yn: Molecular Biology and Evolution. 36, 6, t. 1134-1147

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  15. Cyhoeddwyd

    Estimating the dwarfing rate of an extinct Sicilian elephant

    Baleka, S., Herridge, V. L., Catalano, G., Lister, A. M., Dickinson, M. R., Di Patti, C., Barlow, A., Penkman, K., Hofreiter, M. & Paijmans, J., 23 Awst 2021, Yn: Current Biology.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  16. Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse

    Bellone, R. R., Holl, H., Setaluri, V., Devi, S., Maddodi, N., Archer, S., Sandmeyer, L., Ludwig, A., Foerster, D., Pruvost, M., Reissmann, M., Bortfeldt, R., Adelson, D. L., Lim, S. L., Nelson, J., Haase, B., Engensteiner, M., Leeb, T., Forsyth, G., Mienaltowski, M. J., Mahadevan, P., Hofreiter, M., Paijmans, J. L. A., Gonzalez-Fortes, G., Grahn, B. & Brooks, S. A., 22 Hyd 2013, Yn: PLoS ONE. 8, 10, t. e78280

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  17. Evolutionary history and extinction dynamics of extinct sabre- and scimitar-toothed cats based on ancient mitogenomes.

    Paijmans, J., Barnett, R., Gilbert, M. T. P., Zepeda-Mendoza, M. L., Reumer, J. W. F., de Vos, J., Zazula, G., Nagel, D., Baryshnikov, G., Leonard, J. A., Rohland, N., Westbury, M. V., Barlow, A. & Hofreiter, M., 6 Tach 2017, Yn: Current Biology.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  18. Historical biogeography of the leopard (Panthera pardus) and its extinct European populations.

    Paijmans, J., Barlow, A., Forster, D. W., Henneberger, K., Meyer, M., Nickel, B., Nagel, D., Havmoller, R. W., Baryshnikov, G., Joger, U., Rosendahl, W. & Hofreiter, M., 23 Hyd 2018, Yn: BMC Evolutionary Biology. 18, 156.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  19. Identifying the true number of specimens of the extinct blue antelope ( Hippotragus leucophaeus )

    Hempel, E., Bibi, F., Faith, J. T., Brink, J. S., Kalthoff, D. C., Kamminga, P., Paijmans, J. L. A., Westbury, M. V., Hofreiter, M. & Zachos, F. E., 22 Ion 2021, (E-gyhoeddi cyn argraffu) Yn: Scientific Reports. 11, 1, 2100.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  20. Impact of enrichment conditions on cross-species capture of fresh and degraded DNA

    Paijmans, J. L. A., Fickel, J., Courtiol, A., Hofreiter, M. & Förster, D. W., 1 Ion 2016, Yn: Molecular Ecology Resources. 16, 1, t. 42-55 14 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  21. Inactivation of thermogenic UCP1 as a historical contingency in multiple placental mammal clades

    Gaudry, M. J., Jastroch, M., Treberg, J. R., Hofreiter, M., Paijmans, J. L. A., Starrett, J., Wales, N., Signore, A. V., Springer, M. S. & Campbell, K. L., 7 Gorff 2017, Yn: Science Advances. 3, 7, t. e1602878

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  22. Cyhoeddwyd

    Insight into the introduction of domestic cattle and the process of Neolithization to the Spanish region Galicia by genetic evidence

    Gurke, M., Vidal-Gorosquieta, A., Paijmans, J., Wecek, K., Barlow, A., Gonzalez-Fortes, G., Hartmann, S., Grandal-d'Anglade, A. & Hofreiter, M., 28 Ebr 2021, Yn: PLoS ONE.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  23. Interordinal gene capture, the phylogenetic position of Steller’s sea cow based on molecular and morphological data, and the macroevolutionary history of Sirenia

    Springer, M. S., Signore, A. V., Paijmans, J. L. A., Vélez-Juarbe, J., Domning, D. P., Bauer, C. E., He, K., Crerar, L., Campos, P. F., Murphy, W. J., Meredith, R. W., Gatesy, J., Willerslev, E., MacPhee, R. D. E., Hofreiter, M. & Campbell, K. L., 1 Hyd 2015, Yn: Molecular Phylogenetics and Evolution. 91, t. 178-193 16 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  24. Cyhoeddwyd

    Middle Pleistocene genome calibrates a revised evolutionary history of extinct cave bears

    Barlow, A., Paijmans, J., Alberti, F., Gasparyan, B., Bar-Oz, G., Pinhasi, R., Foronova, I., Puzachenko, A. Y., Pacher, M., Dalén, L., Baryshnikov, G. & Hofreiter, M., 26 Ebr 2021, Yn: Current Biology.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  25. Cyhoeddwyd

    Mitogenome phylogeny including data from additional subspecies provides new insights into the historical biogeography of the Eurasian lynx Lynx lynx

    Mengulluoglu, D., Ambarli, H., Barlow, A., Paijmans, J., Sayar, A. O., Emir, H., Kandemir, I., Hofer, H., Fickel, J. & Forster, D. W., 6 Awst 2021, Yn: Genes. 12, 8

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  26. Mitogenomic analyses from ancient DNA

    Paijmans, J. L. A., Gilbert, M. T. P. & Hofreiter, M., 1 Tach 2013, Yn: Molecular Phylogenetics and Evolution. 69, t. 404-416 13 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  27. Morphological and genetic evidence for early Holocene cattle management in northeastern China

    Zhang, H., Paijmans, J. L. A., Chang, F., Wu, X., Chen, G., Lei, C., Yang, X., Wei, Z., Bradley, D. G., Orlando, L., O’Connor, T. & Hofreiter, M., 8 Tach 2013, Yn: Nature Communications. 4, 2755.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  28. Cyhoeddwyd

    Museum DNA reveals a new, potentially extinct species of rinkhals (Serpentes: Elapidae: Hemachatus) from the Eastern Highlands of Zimbabwe

    Major, T., Renk, P., Reissig, J., Paijmans, J., Morris, E., Hofreiter, M., Barlow, A., Broadley, D. G. & Wüster, W., 27 Medi 2023, Yn: PLoS ONE. 18, 9, 19 t., e0291432.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  29. Optimized DNA sampling of ancient bones using Computed Tomography scans

    Alberti, F., Gonzalez, J., Paijmans, J. L. A., Basler, N., Preick, M., Henneberger, K., Trinks, A., Rabeder, G., Conard, N. J., Münzel, S. C., Joger, U., Fritsch, G., Hildebrandt, T., Hofreiter, M. & Barlow, A., 1 Tach 2018, Yn: Molecular Ecology Resources. 18, 6, t. 1196-1208 13 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  30. Palaeogenome reveals genetic contribution of extinct giant panda to extant populations.

    Sheng, G., Basler, N., Ji, X., Paijmans, J., Alberti, F., Preick, M., Hartmann, S., Westbury, M. V., Yuan, J., Jablonski, N. G., Xenikoudakis, G., Hou, X., Xiao, B., Liu, J.-H., Hofreiter, M., Lai, X. & Barlow, A., 20 Mai 2019, Yn: Current Biology. 29, 10, t. 1695-1700

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  31. Cyhoeddwyd

    Palaeogenomic data from a Late Pleistocene coprolite clarifies the phylogenetic position of Sicilian cave hyena

    Catalano, G., Iurino, D. A., Modi, A., Paijmans, J., Sardella, R., Sineo, L., Caramelli, D. & Barlow, A., 15 Medi 2024, Yn: Quaternary Science Reviews. 340, 108859.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  32. Partial genomic survival of cave bears in living brown bears.

    Barlow, A., Cahill, J. A., Hartmann, S., Theunert, C., Xenikoudakis, G., Fortes, G. G., Paijmans, J., Rabeder, G., Frischauf, C., Grandal-d'Anglade, A., García-Vázquez, A., Murtskhvaladze, M., Saarma, U., Anijalg, P., Skrbinšek, T., Bertorelle, G., Gasparian, B., Bar-Oz, G., Pinhasi, R., Slatkin, M., Dalén, L., Shapiro, B. & Hofreiter, M., 27 Awst 2018, Yn: Nature Ecology and Evolution. 2, t. pages 1563–1570

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  33. Preliminary results on the molecular study of fish-eating by ‘trawling Myotis’ bat species in Europe

    Sommer, R. S., Hofreiter, M., Krüger, F., Siemers, B. M., Paijmans, J. L. A., Li, C. & Geiger, M. F., 27 Chwef 2019, Yn: Vertebrate Zoology.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  34. Cyhoeddwyd

    Recent increase in species-wide diversity after interspecies introgression in the highly endangered Iberian lynx

    Lucena-Perez, M., Paijmans, J., Nocete, F., Nadal, J., Detry, C., Dalén, L., Hofreiter, M., Barlow, A. & Godoy, J., 15 Ion 2024, Yn: Nature Ecology and Evolution.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  35. Cyhoeddwyd

    Successful application of ancient DNA extraction and library construction protocols to museum wet collection specimens

    Straube, N., Lyra, M., Paijmans, J., Preick, M., Basler, N., Penner, J., Rodel, M.-O., Westbury, M. V., Haddad, C. F. B., Barlow, A. & Hofreiter, M., 1 Hyd 2021, Yn: Molecular Ecology Resources.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  36. Targeted resequencing of coding DNA sequences for SNP discovery in nonmodel species

    Förster, D. W., Bull, J. K., Lenz, D., Autenrieth, M., Paijmans, J. L. A., Kraus, R. H. S., Nowak, C., Bayerl, H., Kuehn, R., Saveljev, A. P., Sindičić, M., Hofreiter, M., Schmidt, K. & Fickel, J., 1 Tach 2018, Yn: Molecular Ecology Resources. 18, 6, t. 1356-1373 18 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  37. Cyhoeddwyd

    Taxonomic Identification of Two Poorly Known Lantern Shark Species Based on Mitochondrial DNA From Wet-Collection Paratypes

    Agne, S., Preick, M., Yang, L., Thiel, R., Weigmann, S., Paijmans, J., Barlow, A., Hofreiter, M. & Straube, N., 30 Meh 2022, Yn: Frontiers in Ecology and Evolution. 10, 910009.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  38. Testing of Alignment Parameters for Ancient Samples: Evaluating and optimising mapping parameters for ancient samples using the TAPAS tool.

    Taron, U. H., Lell, M., Barlow, A. & Paijmans, J., 13 Maw 2018, Yn: Genes. 9, 3, 157.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  39. Cyhoeddwyd

    The earliest domestic cat on the Silk Road

    Haruda, A. F., Miller, A. R. V., Paijmans, J., Barlow, A., Tazhekeyev, A., Bailov, S., Hesse, Y., Preick, M., King, T., Thomas, R., Harke, H. & Arzhantseva, L., 9 Gorff 2020, Yn: Scientific Reports.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  40. The future of ancient DNA: Technical advances and conceptual shifts.

    Hofreiter, M., Paijmans, J., Goodchild, H., Speller, C. F., Barlow, A., Fortes, G. G., Thomas, J. A., Ludwig, A. & Collins, M. J., 1 Maw 2015, Yn: BioEssays. 37, t. 284-293

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  41. Tropical ancient DNA reveals relationships of extinct Bahamian giant tortoise.

    Kehlmaier, C., Barlow, A., Hastings, A. K., Vamberger, M., Paijmans, J., Steadman, D., Albury, N. A., Franz, R., Hofreiter, M. & Fritz, U., 11 Ion 2017, Yn: Proceedings of the Royal Society B: Biological Sciences. 284, 1846

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

  42. Pennod › Ymchwil › Heb ei adolygu gan gymheiriaid

  43. Analysis of whole mitogenomes from ancient samples

    Fortes, G. G. & Paijmans, J. L. A., 2016, Whole genome amplification. Kroneis, T. (gol.). Humana Press, USA, (Methods in Molecular Biology).

    Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Pennod

  44. Application of Solid-State Capture for the Retrieval of Small-to-Medium Sized Target Loci from Ancient DNA

    Paijmans, J. L. A., González Fortes, G. & Förster, D. W., 16 Maw 2019, Ancient DNA. Shapiro, B., Barlow, A., Heintzman, P. D., Hofreiter, M., Paijmans, J. L. A. & Soares, A. E. R. (gol.). New York, NY: Springer New York, Cyfrol 1963. t. 129-139 11 t.

    Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Pennod

  45. Double-stranded library preparation for ancient and other degraded samples

    Henneberger, K., Barlow, A. & Paijmans, J., 16 Maw 2019, Ancient DNA: methods and protocols. Second Edition. Humana New York, NY, t. 65-73

    Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Pennod

  46. Whole-Genome Capture of Ancient DNA Using Homemade Baits

    Fortes, G. & Paijmans, J. L. A., 2019, Methods in Molecular Biology (Clifton, N.J.). Cyfrol 1963. t. 93-105 13 t.

    Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Pennod

  47. Llyfr › Ymchwil › Heb ei adolygu gan gymheiriaid

  48. Ancient DNA: methods and protocols. Second Edition.

    Shapiro, B. (Golygydd), Barlow, A. (Golygydd), Heintzman, P. D. (Golygydd), Hofreiter, M. (Golygydd), Paijmans, J. (Golygydd) & Soares, A. E. (Golygydd), 16 Maw 2019, Humana New York, NY. (Methods in Molecular Biology)

    Allbwn ymchwil: Llyfr/Adroddiad › Llyfr

  49. Rhagargraffiad › Ymchwil

  50. Sequencing single-stranded libraries on the Illumina NextSeq 500 platform.

    Paijmans, J., Baleka, S., Henneberger, K., Taron, U. H., Trinks, A., Westbury, M. V. & Barlow, A., 29 Tach 2017.

    Allbwn ymchwil: Papur gweithio › Rhagargraffiad