1. Published

   Biodiversity and interactions of acidophiles: Key to understanding and optimizing microbial processing of ores and concentrates.

   Johnson, D. B., 1 Dec 2008, In: Transactions of Nonferrous Metals Society of China. 18, 6, p. 1367-1373

   Research output: Contribution to journal › Article › peer-review

2. Published

   Novel thermo-acidophilic bacteria isolated from geothermal sites in Yellowstone National Park: physiological and phylogenetic characteristics.

   Johnson, D. B., Okibe, N. & Roberto, F. F., 1 Jul 2003, In: Archives of Microbiology. 180, 1, p. 60-68

   Research output: Contribution to journal › Article › peer-review

3. Published

   Geomicrobiology of extremely acidic subsurface environments

   Johnson, D. B., 1 Jul 2012, In: Fems Microbiology Ecology. 81, 1, p. 2-12

   Research output: Contribution to journal › Article › peer-review

4. Published

   Redox transformations in sulfur and transition metals at low pH and how these impact metal extraction biotechnologies

   Johnson, D. B., Nov 2015.

   Research output: Contribution to conference › Paper › peer-review

5. Published

   New Insights into Salt-Tolerance in Acidophilic Iron-Oxidising Bacteria

   Johnson, D. B., Grail, B. & Bonnefoy, V., Nov 2015, In: Advanced Materials Research. 1130, p. 3-6

   Research output: Contribution to journal › Article › peer-review

6. Published

   The Evolution, Current Status, and Future Prospects of Using Biotechnologies in the Mineral Extraction and Metal Recovery Sectors

   Johnson, D. B., 8 Aug 2018, In: Minerals. 8, 8, 343.

   Research output: Contribution to journal › Article › peer-review

7. Published

   Genus II. Leptospirillum

   Johnson, D. B., Boone, D. R. (ed.) & Castenholtz, R. W. (ed.), 1 Jan 2001, Bergey's Manual of Systematic Bacteriology: Archaea and the Deeply Branching and Phototrophic Bacteria v. 1. 2001 ed. Springer, p. 453-457

   Research output: Chapter in Book/Report/Conference proceeding › Chapter

8. Published

   Removal of soluble manganese from mine waters using a fixed bed column bioreactor.

   Johnson, D. B., Miller, H., Ukermann, S., Hallberg, K. B., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1163-1170.

   Research output: Contribution to conference › Paper

9. Published

   Development and application of bioprocessing technologies in the metal mining industry

   Johnson, D. B., 1 Aug 2012.

   Research output: Contribution to conference › Paper

10. Published

    A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores

    Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58

    Research output: Contribution to journal › Article › peer-review

11. Published

    Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles

    Johnson, D. B., 1 Oct 2012, In: Hydrometallurgy. 127-128, p. 172-177

    Research output: Contribution to journal › Article › peer-review

12. Published

    Isolation and characterization of Acidicaldus organivorus, gen. nov., sp nov.: a novel sulfur-oxidizing, ferric iron-reducing thermo-acidophilic heterotrophic Proteobacterium.

    Johnson, D. B., Stallwood, B., Kimura, S. & Hallberg, K. B., 1 Apr 2006, In: Archives of Microbiology. 185, 3, p. 212-221

    Research output: Contribution to journal › Article › peer-review

13. Published

    Novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams

    Johnson, D. B., Sen, A. M., Kimura, S., Rowe, O. F. & Hallberg, K. B., 1 Mar 2006, In: Mineral Processing and Extractive Metallurgy. 115, 1, p. 19-24

    Research output: Contribution to journal › Article › peer-review

14. Published

    Microbial communities and interactions in low pH environments

    Johnson, D. B., 2016, Acidophiles: Life in Extremely Acidic Environments. Quatrini, R. & Johnson, D. B. (eds.). Caister Academic Press Limited, p. 121-138

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

15. Published

    The persistent spatial patchiness of limpet grazing.

    Johnson, M. P., Hanley, M. E., Frost, N. J., Mosley, M. W. & Hawkins, S. J., 31 Oct 2008, In: Journal of Experimental Marine Biology and Ecology. 365, 2, p. 136-141

    Research output: Contribution to journal › Article › peer-review

16. Published

    Development of an integrated microbiological approach for remediation of acid mine drainage and recovery of heavy metals.

    Johnson, D. B., Rowe, O., Kimura, S., Hallberg, K. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 151-157.

    Research output: Contribution to conference › Paper

17. Published

    The microbiology of acid mine drainage: genesis and biotreatment.

    Johnson, D. B., Dziurla, M. A., Kolmert, A. & Hallberg, K. B., 1 May 2002, In: South African Journal of Science. 98, 5-6, p. 249-255

    Research output: Contribution to journal › Article › peer-review

18. Published

    Sulfobacillus benefaciens sp nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations.

    Johnson, D. B., Joulian, C., d'Hughes, P. & Hallberg, K. B., 1 Nov 2008, In: Extremophiles. 12, 6, p. 789-798

    Research output: Contribution to journal › Article › peer-review

19. Published

    Deconstructing and reconstructing microbial communities that promote the natural attenuation of acidic mine waters

    Johnson, B., 2 Apr 2017, In: Abstracts of papers - American Chemical Society. 253

    Research output: Contribution to journal › Meeting Abstract › peer-review

20. Published

    The area-independent effects of habitat complexity on biodiversity vary between regions.

    Johnson, M. P., Frost, N. J., Mosley, M. W., Roberts, M. F. & Hawkins, S. J., 1 Feb 2003, In: Ecology Letters. 6, 2, p. 126-132

    Research output: Contribution to journal › Article › peer-review

21. Published

    Dissimilatory reduction of sulfate in extremely acidic environments is carried out by novel sulfidogenic bacteria in syntrophic consortia.

    Johnson, D. B., Rowe, O. F., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 36.

    Research output: Contribution to conference › Paper

22. Published

    Biomining goes underground

    Johnson, D. B., 27 Feb 2015, In: Nature Geoscience. 8, p. 165-166

    Research output: Contribution to journal › Article › peer-review

23. Published

    Ferrimicrobium acidiphilum gen. nov., sp nov and Ferrithrix thermotolerans gen. nov., sp nov.: heterotrophic, iron-oxidizing, extremely acidophilic actinobacteria.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Thomas, A. & Hallberg, K. B., 1 May 2009, In: International Journal of Systematic and Evolutionary Microbiology. 59, p. 1082-1089

    Research output: Contribution to journal › Article › peer-review

24. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journal › Article › peer-review

25. Published

    "Bioshrouding": a novel approach for securing reactive mineral tailings

    Johnson, D. B., Yajie, L. & Okibe, N., Mar 2008, In: Biotechnology Letters. 30, 3, p. 445-9 5 p.

    Research output: Contribution to journal › Article › peer-review

26. Published

    Editorial: Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. & Schippers, A., 14 Mar 2017, In: Frontiers in Microbiology. 8, p. 428

    Research output: Contribution to journal › Article › peer-review

27. Published

    Bioleaching of arsenic-rich cobalt mineral resources, and evidence for concurrent biomineralisation of scorodite during oxidative bio-processing of skutterudite

    Johnson, D. B., Dybowska, A., Schofield, P., Herrington, R., Smith, S. & Santos, A. L., 1 Aug 2020, In: Hydrometallurgy. 195, 105395.

    Research output: Contribution to journal › Article › peer-review

28. Published

    Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, as revealed by a combination of cultivation-based and cultivation-independent techniques.

    Johnson, D. B., Kimura, S., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 139.

    Research output: Contribution to conference › Paper

29. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journal › Article › peer-review

30. Published

    Effects of bottom trawling on fish foraging and feeding

    Johnson, A. F., Gorelli, G., Jenkins, S. R., Hiddink, J. G. & Hinz, H., 10 Dec 2014, In: Proceedings of the royal Society B. 282, 1799

    Research output: Contribution to journal › Article › peer-review

31. Published

    Microbially-mediated dissolution and synthesis of minerals in extremely acidic environments

    Johnson, D. B., 20 Apr 2012.

    Research output: Contribution to conference › Paper

32. Published

    Concentrate mineralogy dictates the composition of bioleaching mineral consortia

    Johnson, D. B., Yajie, L., Okibe, N., Coupland, K. & Hallberg, K. B., 1 Jan 2007, In: Advanced Materials Research. 20-21, p. 403-404

    Research output: Contribution to journal › Article › peer-review

33. Published

    Physiology and ecology of acidophilic microorganisms.

    Johnson, D. B., Gerday, C. (ed.) & Glansdorff, N. (ed.), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

34. Published

    Biodiversity of acidophilic moderate thermophiles isolated from two sites in Yellowstone National Park, and their roles in the dissimilatory oxido-reduction of iron.

    Johnson, D. B., Body, D. A., Bridge, T. A., Bruhn, D. F., Roberto, F. F., Reysenbach, A. L. (ed.), Voytek, M. (ed.) & Mancinelli, R. (ed.), 1 Jan 2001, Thermophiles: Biodiversity: Ecology and Evolution. 2001 ed. Kluwer Academic/Plenum Publishers, p. 23-39

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

35. Published

    Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis

    Johnson, D. B., Okibe, N. & Hallberg, K. B., 1 Mar 2005, In: Journal of Microbiological Methods. 60, 3, p. 299-313

    Research output: Contribution to journal › Article › peer-review

36. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

37. Published

    Sulfidogenesis at low pH: a novel approach for bioremediating acid rock drainage and recovering soluble metals.

    Johnson, D. B., Rowe, O. F., Kimura, S. & Hallberg, K. B., 1 Jan 2005.

    Research output: Contribution to conference › Paper

38. Published

    Developing Sustainable Biotechnologies for Mine Water Treatment in the 21st Century

    Johnson, B., Santos, A. L., Falagan, C., Jones, R. M., Grail, B. M., Holanda, R. & Hedrich, S., Jul 2016, Procddings IMWA 2016. p. 782-789

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

39. Published

    Using bacteria to break and make minerals in acidic liquours: industrial and environmental implications

    Johnson, D. B., 19 Jun 2013.

    Research output: Contribution to conference › Paper

40. Published

    Dissolved Organic Matter in Freshwater Ecosystems: Nature, Origins and Ecological Significance

    Johnes, P. (ed.), Evershed, R. P. (ed.), Jones, D. L. (ed.) & Maberly, S. C. (ed.), 2023, Springer.

    Research output: Book/Report › Book › peer-review

41. Published

    MedX3D: Standards Enabled Desktop Medical 3D.

    John, N. W., Aratow, M., Couch, J., Evestedt, D., Hudson, A. D., Polys, N., Puk, R. F., Ray, A., Victor, K., Wang, Q., Westwood, J. D. (ed.), Haluck, R. S. (ed.), Hoffmann, H. M. (ed.), Mogel, G. T. (ed.), Phillips, R. (ed.), Robb, R. A. (ed.) & Vosburgh, K. G. (ed.), 1 Jan 2008, Studies in Health Technology and Informatics. 2008 ed. IOS Press, p. 189-194

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

42. Published

    The Use of Stereoscopy in a Neurosurgery Training Virtual Environment

    John, N., Phillips, N., Ap-Cenydd, L., Pop, S., Coope, D., Kamaly-Asl, I., de Souza, C. & Watt, S., 7 Jul 2017, In: Presence: Teleoperators and Virtual Environments. 25, 4, p. 289-298

    Research output: Contribution to journal › Article › peer-review

43. Published

    Cybermedicine tools for communication and learning.

    John, N. W. & Lim, I. S., 1 Jan 2007, In: Journal of Visual Communication in Medicine. 30, 1, p. 4-9

    Research output: Contribution to journal › Article › peer-review

44. Published

    Interrogation of patient data delivered to the operating theatre during Hepato-Pancreatic surgery using high performance computing

    John, N. W., McCloy, R. F. & Herrman, S., 1 Jan 2004, In: Computer Aided Surgery. 9, 6, p. 235-242

    Research output: Contribution to journal › Article › peer-review

45. Published

    Quantum capacitance in nanoscale device modelling.

    John, D. L., Castro, L. C. & Pulfrey, D. L., 1 Nov 2004, In: Journal of Applied Physics. 96, 9, p. 5180-5184

    Research output: Contribution to journal › Article › peer-review

46. Published

    Electrostatics of Coaxial Schottky-Barrier Nanotube Field-Effect Transistors.

    John, D. L., Castro, L. C., Clifford, J. & Pulfrey, D. L., 1 Sept 2003, In: IEEE Transactions On Nanotechnology. 2, 3, p. 175-180

    Research output: Contribution to journal › Article › peer-review

47. Published

    Computational Requirements of the Virtual Patient.

    John, N. W., Hughes, C., Pop, S., Vidal, F. P. & Buckley, O., 1 Jan 2009, p. 140-143.

    Research output: Contribution to conference › Paper

48. Published

    Navigating and visualizing three-dimensional data sets.

    John, N. W. & McCloy, R. F., 1 Jan 2004, In: British Journal of Radiology. 77, 2, p. S108-S113

    Research output: Contribution to journal › Article › peer-review

49. Published

    Physics-based virtual environment for training core skills in vascular interventional radiological procedures

    John, N. W., Luboz, V., Bello, F., Hughes, C., Vidal, F. P., Lim, I. S., How, T. V., Zhai, J., Johnson, S., Chalmers, N., Brodlie, K., Bulpit, A., Song, Y., Kessel, D. O., Phillips, R., Ward, J. W., Pisharody, S., Zhang, Y., Crawshaw, C. M. & Gould, D. A., 1 Jan 2008, Proceeding of Medicine Meets Virtual Reality 16 (MMVR16). Long Beach, California: IOS Press, Vol. 132. p. 195-197 3 p. (Studies in Health Technology and Informatics).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

50. Published

    The Research Institute of Visual Computing, RIVIC

    John, N. W., Jones, M., Martin, R., Vidal, F. P. & Zwiggelaar, R., 1 May 2013, Eurographics 2013 - Lab Presentation. Torres, J. C. & Lécuyer, A. (eds.). Girona, Spain: The Eurographics Association

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review