College of Science & Engineering
- Published
On the ecology and physiology of acidophilic sulfate-reducing and iron-oxidizing bacteria
Johnson, D. B., 1 Oct 2012.Research output: Contribution to conference › Paper
- Published
Biodiversity and interactions of acidophiles: Key to understanding and optimizing microbial processing of ores and concentrates.
Johnson, D. B., 1 Dec 2008, In: Transactions of Nonferrous Metals Society of China. 18, 6, p. 1367-1373Research output: Contribution to journal › Article › peer-review
- Published
Novel thermo-acidophilic bacteria isolated from geothermal sites in Yellowstone National Park: physiological and phylogenetic characteristics.
Johnson, D. B., Okibe, N. & Roberto, F. F., 1 Jul 2003, In: Archives of Microbiology. 180, 1, p. 60-68Research output: Contribution to journal › Article › peer-review
- Published
Geomicrobiology of extremely acidic subsurface environments
Johnson, D. B., 1 Jul 2012, In: Fems Microbiology Ecology. 81, 1, p. 2-12Research output: Contribution to journal › Article › peer-review
- Published
Redox transformations in sulfur and transition metals at low pH and how these impact metal extraction biotechnologies
Johnson, D. B., Nov 2015.Research output: Contribution to conference › Paper › peer-review
- Published
New Insights into Salt-Tolerance in Acidophilic Iron-Oxidising Bacteria
Johnson, D. B., Grail, B. & Bonnefoy, V., Nov 2015, In: Advanced Materials Research. 1130, p. 3-6Research output: Contribution to journal › Article › peer-review
- Published
The Evolution, Current Status, and Future Prospects of Using Biotechnologies in the Mineral Extraction and Metal Recovery Sectors
Johnson, D. B., 8 Aug 2018, In: Minerals. 8, 8, 343.Research output: Contribution to journal › Article › peer-review
- Published
Genus II. Leptospirillum
Johnson, D. B., Boone, D. R. (ed.) & Castenholtz, R. W. (ed.), 1 Jan 2001, Bergey's Manual of Systematic Bacteriology: Archaea and the Deeply Branching and Phototrophic Bacteria v. 1. 2001 ed. Springer, p. 453-457Research output: Chapter in Book/Report/Conference proceeding › Chapter
- Published
Removal of soluble manganese from mine waters using a fixed bed column bioreactor.
Johnson, D. B., Miller, H., Ukermann, S., Hallberg, K. B., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1163-1170.Research output: Contribution to conference › Paper
- Published
Development and application of bioprocessing technologies in the metal mining industry
Johnson, D. B., 1 Aug 2012.Research output: Contribution to conference › Paper
- Published
A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores
Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58Research output: Contribution to journal › Article › peer-review
- Published
Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles
Johnson, D. B., 1 Oct 2012, In: Hydrometallurgy. 127-128, p. 172-177Research output: Contribution to journal › Article › peer-review
- Published
Isolation and characterization of Acidicaldus organivorus, gen. nov., sp nov.: a novel sulfur-oxidizing, ferric iron-reducing thermo-acidophilic heterotrophic Proteobacterium.
Johnson, D. B., Stallwood, B., Kimura, S. & Hallberg, K. B., 1 Apr 2006, In: Archives of Microbiology. 185, 3, p. 212-221Research output: Contribution to journal › Article › peer-review
- Published
Novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams
Johnson, D. B., Sen, A. M., Kimura, S., Rowe, O. F. & Hallberg, K. B., 1 Mar 2006, In: Mineral Processing and Extractive Metallurgy. 115, 1, p. 19-24Research output: Contribution to journal › Article › peer-review
- Published
Microbial communities and interactions in low pH environments
Johnson, D. B., 2016, Acidophiles: Life in Extremely Acidic Environments. Quatrini, R. & Johnson, D. B. (eds.). Caister Academic Press Limited, p. 121-138Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- Published
The persistent spatial patchiness of limpet grazing.
Johnson, M. P., Hanley, M. E., Frost, N. J., Mosley, M. W. & Hawkins, S. J., 31 Oct 2008, In: Journal of Experimental Marine Biology and Ecology. 365, 2, p. 136-141Research output: Contribution to journal › Article › peer-review
- Published
Development of an integrated microbiological approach for remediation of acid mine drainage and recovery of heavy metals.
Johnson, D. B., Rowe, O., Kimura, S., Hallberg, K. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 151-157.Research output: Contribution to conference › Paper
- Published
The microbiology of acid mine drainage: genesis and biotreatment.
Johnson, D. B., Dziurla, M. A., Kolmert, A. & Hallberg, K. B., 1 May 2002, In: South African Journal of Science. 98, 5-6, p. 249-255Research output: Contribution to journal › Article › peer-review
- Published
Sulfobacillus benefaciens sp nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations.
Johnson, D. B., Joulian, C., d'Hughes, P. & Hallberg, K. B., 1 Nov 2008, In: Extremophiles. 12, 6, p. 789-798Research output: Contribution to journal › Article › peer-review
- Published
Deconstructing and reconstructing microbial communities that promote the natural attenuation of acidic mine waters
Johnson, B., 2 Apr 2017, In: Abstracts of papers - American Chemical Society. 253Research output: Contribution to journal › Meeting Abstract › peer-review
- Published
The area-independent effects of habitat complexity on biodiversity vary between regions.
Johnson, M. P., Frost, N. J., Mosley, M. W., Roberts, M. F. & Hawkins, S. J., 1 Feb 2003, In: Ecology Letters. 6, 2, p. 126-132Research output: Contribution to journal › Article › peer-review
- Published
Dissimilatory reduction of sulfate in extremely acidic environments is carried out by novel sulfidogenic bacteria in syntrophic consortia.
Johnson, D. B., Rowe, O. F., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 36.Research output: Contribution to conference › Paper
- Published
Biomining goes underground
Johnson, D. B., 27 Feb 2015, In: Nature Geoscience. 8, p. 165-166Research output: Contribution to journal › Article › peer-review
- Published
Ferrimicrobium acidiphilum gen. nov., sp nov and Ferrithrix thermotolerans gen. nov., sp nov.: heterotrophic, iron-oxidizing, extremely acidophilic actinobacteria.
Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Thomas, A. & Hallberg, K. B., 1 May 2009, In: International Journal of Systematic and Evolutionary Microbiology. 59, p. 1082-1089Research output: Contribution to journal › Article › peer-review
- Published
Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.
Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93Research output: Contribution to journal › Article › peer-review
- Published
"Bioshrouding": a novel approach for securing reactive mineral tailings
Johnson, D. B., Yajie, L. & Okibe, N., Mar 2008, In: Biotechnology Letters. 30, 3, p. 445-9 5 p.Research output: Contribution to journal › Article › peer-review
- Published
Editorial: Recent Advances in Acidophile Microbiology: Fundamentals and Applications
Johnson, D. B. & Schippers, A., 14 Mar 2017, In: Frontiers in Microbiology. 8, p. 428Research output: Contribution to journal › Article › peer-review
- Published
Bioleaching of arsenic-rich cobalt mineral resources, and evidence for concurrent biomineralisation of scorodite during oxidative bio-processing of skutterudite
Johnson, D. B., Dybowska, A., Schofield, P., Herrington, R., Smith, S. & Santos, A. L., 1 Aug 2020, In: Hydrometallurgy. 195, 105395.Research output: Contribution to journal › Article › peer-review
- Published
Biodiversity of microbial populations in macroscopic “acid streamer” growths at an abandoned pyrite mine, as revealed by a combination of cultivation-based and cultivation-independent techniques.
Johnson, D. B., Kimura, S., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 139.Research output: Contribution to conference › Paper
- Published
Biomining in reverse gear: using bacteria to extract metals from oxidized ores
Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5Research output: Contribution to journal › Article › peer-review
- Published
Effects of bottom trawling on fish foraging and feeding
Johnson, A. F., Gorelli, G., Jenkins, S. R., Hiddink, J. G. & Hinz, H., 10 Dec 2014, In: Proceedings of the royal Society B. 282, 1799Research output: Contribution to journal › Article › peer-review
- Published
Microbially-mediated dissolution and synthesis of minerals in extremely acidic environments
Johnson, D. B., 20 Apr 2012.Research output: Contribution to conference › Paper
- Published
Concentrate mineralogy dictates the composition of bioleaching mineral consortia
Johnson, D. B., Yajie, L., Okibe, N., Coupland, K. & Hallberg, K. B., 1 Jan 2007, In: Advanced Materials Research. 20-21, p. 403-404Research output: Contribution to journal › Article › peer-review
- Published
Physiology and ecology of acidophilic microorganisms.
Johnson, D. B., Gerday, C. (ed.) & Glansdorff, N. (ed.), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270Research output: Chapter in Book/Report/Conference proceeding › Chapter
- Published
Biodiversity of acidophilic moderate thermophiles isolated from two sites in Yellowstone National Park, and their roles in the dissimilatory oxido-reduction of iron.
Johnson, D. B., Body, D. A., Bridge, T. A., Bruhn, D. F., Roberto, F. F., Reysenbach, A. L. (ed.), Voytek, M. (ed.) & Mancinelli, R. (ed.), 1 Jan 2001, Thermophiles: Biodiversity: Ecology and Evolution. 2001 ed. Kluwer Academic/Plenum Publishers, p. 23-39Research output: Chapter in Book/Report/Conference proceeding › Chapter
- Published
Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis
Johnson, D. B., Okibe, N. & Hallberg, K. B., 1 Mar 2005, In: Journal of Microbiological Methods. 60, 3, p. 299-313Research output: Contribution to journal › Article › peer-review
- Published
Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.
Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470Research output: Chapter in Book/Report/Conference proceeding › Chapter
- Published
Sulfidogenesis at low pH: a novel approach for bioremediating acid rock drainage and recovering soluble metals.
Johnson, D. B., Rowe, O. F., Kimura, S. & Hallberg, K. B., 1 Jan 2005.Research output: Contribution to conference › Paper
- Published
Developing Sustainable Biotechnologies for Mine Water Treatment in the 21st Century
Johnson, B., Santos, A. L., Falagan, C., Jones, R. M., Grail, B. M., Holanda, R. & Hedrich, S., Jul 2016, Procddings IMWA 2016. p. 782-789Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
- Published
Using bacteria to break and make minerals in acidic liquours: industrial and environmental implications
Johnson, D. B., 19 Jun 2013.Research output: Contribution to conference › Paper
- Published
Dissolved Organic Matter in Freshwater Ecosystems: Nature, Origins and Ecological Significance
Johnes, P. (ed.), Evershed, R. P. (ed.), Jones, D. L. (ed.) & Maberly, S. C. (ed.), 2023, Springer.Research output: Book/Report › Book › peer-review
- Published
MedX3D: Standards Enabled Desktop Medical 3D.
John, N. W., Aratow, M., Couch, J., Evestedt, D., Hudson, A. D., Polys, N., Puk, R. F., Ray, A., Victor, K., Wang, Q., Westwood, J. D. (ed.), Haluck, R. S. (ed.), Hoffmann, H. M. (ed.), Mogel, G. T. (ed.), Phillips, R. (ed.), Robb, R. A. (ed.) & Vosburgh, K. G. (ed.), 1 Jan 2008, Studies in Health Technology and Informatics. 2008 ed. IOS Press, p. 189-194Research output: Chapter in Book/Report/Conference proceeding › Chapter
- Published
Cybermedicine tools for communication and learning.
John, N. W. & Lim, I. S., 1 Jan 2007, In: Journal of Visual Communication in Medicine. 30, 1, p. 4-9Research output: Contribution to journal › Article › peer-review
- Published
Interrogation of patient data delivered to the operating theatre during Hepato-Pancreatic surgery using high performance computing
John, N. W., McCloy, R. F. & Herrman, S., 1 Jan 2004, In: Computer Aided Surgery. 9, 6, p. 235-242Research output: Contribution to journal › Article › peer-review
- Published
Quantum capacitance in nanoscale device modelling.
John, D. L., Castro, L. C. & Pulfrey, D. L., 1 Nov 2004, In: Journal of Applied Physics. 96, 9, p. 5180-5184Research output: Contribution to journal › Article › peer-review
- Published
Electrostatics of Coaxial Schottky-Barrier Nanotube Field-Effect Transistors.
John, D. L., Castro, L. C., Clifford, J. & Pulfrey, D. L., 1 Sept 2003, In: IEEE Transactions On Nanotechnology. 2, 3, p. 175-180Research output: Contribution to journal › Article › peer-review
- Published
Computational Requirements of the Virtual Patient.
John, N. W., Hughes, C., Pop, S., Vidal, F. P. & Buckley, O., 1 Jan 2009, p. 140-143.Research output: Contribution to conference › Paper
- Published
Navigating and visualizing three-dimensional data sets.
John, N. W. & McCloy, R. F., 1 Jan 2004, In: British Journal of Radiology. 77, 2, p. S108-S113Research output: Contribution to journal › Article › peer-review
- Published
Physics-based virtual environment for training core skills in vascular interventional radiological procedures
John, N. W., Luboz, V., Bello, F., Hughes, C., Vidal, F. P., Lim, I. S., How, T. V., Zhai, J., Johnson, S., Chalmers, N., Brodlie, K., Bulpit, A., Song, Y., Kessel, D. O., Phillips, R., Ward, J. W., Pisharody, S., Zhang, Y., Crawshaw, C. M. & Gould, D. A., 1 Jan 2008, Proceeding of Medicine Meets Virtual Reality 16 (MMVR16). Long Beach, California: IOS Press, Vol. 132. p. 195-197 3 p. (Studies in Health Technology and Informatics).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review
- Published
The Research Institute of Visual Computing, RIVIC
John, N. W., Jones, M., Martin, R., Vidal, F. P. & Zwiggelaar, R., 1 May 2013, Eurographics 2013 - Lab Presentation. Torres, J. C. & Lécuyer, A. (eds.). Girona, Spain: The Eurographics AssociationResearch output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review