Microbial degradation of bioplastic (PHBV) is limited by nutrient availability at high microplastic loadings

Reay, M. K., Graf, M., Greenfield, L., Bargiela, R., Onyije, C., Lloyd, C. E. M., Bull, I. D., Evershed, R. P., Golyshin, P., Chadwick, D. & Jones, D. L., 29 Oct 2024, (E-pub ahead of print) In: Environmental Science: Advances.

Research output: Contribution to journal › Article › peer-review

Conversion of a carboxylesterase into a triacylglycerol lipase by a random mutation.

Reyes-Duarte, D., Polaina, J., Lopez-Cortes, N., Alcalde, M., Plou, F. J., Elborough, K., Ballesteros, A., Timmis, K. N., Golyshin, P. N. & Ferrer, M., 1 Nov 2005, In: Angewandte Chemie - International Edition. 44, 46, p. 7553-7557

Research output: Contribution to journal › Article › peer-review

Анализ криптической плазмиды pN30 из нефтеразрушающего штамма Rhodococcus erythropolis 30

Riabchenko, L. E., Novikov, A. D., Golyshin, P. N. & Ianenko, A. S., Dec 2005, In: Genetika. 41, 12, p. 1725-7 3 p.

Research output: Contribution to journal › Article › peer-review

Systems approaches to microbial communities and their functioning

Röling, W. F. M., Ferrer, M. & Golyshin, P. N., Aug 2010, In: Current Opinion in Biotechnology. 21, 4, p. 532-8 7 p.

Research output: Contribution to journal › Review article › peer-review

Proteomic insights into metabolic adaptations in Alcanivorax borkumensis induced by alkane utilization.

Sabirova, J. S., Ferrer, M., Regenhardt, D., Timmis, K. N. & Golyshin, P. N., 1 Jun 2006, In: Journal of Bacteriology. 188, 11, p. 3763-3773

Research output: Contribution to journal › Article › peer-review

Niche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2.

Sabirova, J. S., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2008, In: FEMS Microbiology Letters. 285, 1, p. 89-96

Research output: Contribution to journal › Article › peer-review

Transcriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes

Sabirova, J. S., Becker, A., Lünsdorf, H., Nicaud, J.-M., Timmis, K. N. & Golyshin, P. N., Jun 2011, In: FEMS Microbiology Letters. 319, 2, p. 160-8 9 p.

Research output: Contribution to journal › Article › peer-review

Rational Engineering of Multiple Active Sites in an Ester Hydrolase

Santiago, G., Martinez-Martinez, M., Alonso, S., Bargiela, R., Coscolín, C., Golyshin, P., Guallar, V. & Ferrer, M., Mar 2018, In: Biochemistry. 57, 15, p. 2245-2255

Research output: Contribution to journal › Article › peer-review

Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.

Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F.-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Jul 2006, In: Nature Biotechnology. 24, 8, p. 997-1004 8 p.

Research output: Contribution to journal › Article › peer-review

Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

Smedile, F., Messina, E., La Cono, V., Tsoy, O., Monticelli, L. S., Borghini, M., Giuliano, L., Golyshin, P. N., Mushegian, A. & Yakimov, M. M., 1 Jan 2013, In: Environmental Microbiology. 15, 1, p. 167-182

Research output: Contribution to journal › Article › peer-review

Sulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes

Sorokin, D. Y., Messina, E., La Cono, V., Ferrero, M., Ciordia, S., Mena, M. C., Toshchakov, S. V., Golyshin, P. N. & Yakimoy, M. M., Oct 2018, In: Frontiers in Microbiology. 9, 2359.

Research output: Contribution to journal › Article › peer-review

Elemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon

Sorokin, D. Y., Kublanov, I. V., Gavrilov, S. N., Rojo, D., Roman, P., Golyshin, P., Slepak, V. Z., Smedile, F., Ferrer, M., Messina, E., La Cono, V. & Yakimov, M. M., Jan 2016, In: ISME Journal. 10, p. 240-252

Research output: Contribution to journal › Article › peer-review

Anaerobic carboxydotrophy in sulfur-respiring haloarchaea from hypersaline lakes

Sorokin, D. Y., Merkel, A. Y., Messina, E., Taugi, C., Pabst, M., Golyshin, P. & Yakimov, M. M., 1 Jun 2022, In: The ISME Journal. 16, 6, p. 1534-1546 13 p.

Research output: Contribution to journal › Article › peer-review

Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis

Sorokin, D. Y., Makarova, K. S., Abbas, B., Ferrer, M., Golyshin, P., Galinski, E. A., Ciordia, S., Mena, M. C., Merkel, A. Y., Wolf, Y. I., van Loosdrecht, M. C. M. & Koonin, E. V., May 2017, In: Nature Microbiology. 2, 17081 .

Research output: Contribution to journal › Article › peer-review

Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats

Sorokin, D. Y., Messina, E., Smedile, F., Roman, P., Sinninghe Damste, J. S., Ciordia, S., Mena, M. C., Ferrer, M., Golyshin, P., Kublanov, I. V., Samarov, N. I., Toshchakov, S. V., La Cono, V. & Yakimov, M. M., 20 Jan 2017, In: ISME Journal. 11, p. 1245-1260

Research output: Contribution to journal › Article › peer-review

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes

Tchigvintsev, A., Tran, H., Popvic, A., Kovacic, F., Brown, G., Flick, R., Hajighasemi, M., Egorova, O., Somody, J. C., Tchigvintsev, D., Khusnutdinova, A., Chernikova, T. N., Golyshina, O., Yakimov, M. M., Savchenko, A., Golyshin, P., Jaeger, K. E. & Yakunin, A. F., 1 Mar 2015, In: Applied Microbiology and Biotechnology. 99, 5, p. 2165-2178

Research output: Contribution to journal › Article › peer-review

A communal catalogue reveals Earth's multiscale microbial diversity

Thompson, L. R., Sanders, J. G., McDonald, D., Amir, A., Ladau, J., Locey, K. J., Prill, R. J., Tripathi, A., Gibbons, S. M., Ackermann, G., Navas-Molina, J. A., Janssen, S., Kopylova, E., Vazquez-Baeza, Y., Gonzalez, A., Morton, J. T., Mirarab, S., Xu, Z. Z., Jiang, L., Haroon, M. F., Kanbar, J., Zhu, Q., Song, S. J., Kosciolek, T., Bokulich, N. A., Lefler, J., Brislawn, C. J., Humphrey, G., Owens, S. M., Hampton-Marcell, J., Berg-Lyons, D., McKenzie, V., Fierer, N., Fuhrman, J. A., Clauset, A., Stevens, R. L., Shade, A., Pollard, K. S., Goodwin, K. D., Jansson, J. K., Gilbert, J. A., Knight, R., Agosto Rivera, J. L., Al-Moosawi, L., Alverdy, J., Amato, K. R., Andras, J., Angenent, L. T., Antonopoulos, D. A., Apprill, A., Armitage, D., Ballantine, K., Bárta, J., Baum, J. K., Berry, A., Bhatnagar, A., Bhatnagar, M., Biddle, J. F., Bittner, L., Boldgiv, B., Bottos, E., Boyer, D. M., Braun, J., Brazelton, W., Brearley, F. Q., Campbell, A. H., Caporaso, J. G., Cardona, C., Carroll, J., Cary, S. C., Casper, B. B., Charles, T. C., Chu, H., Claar, D. C., Clark, R. G., Clayton, J. B., Clemente, J. C., Cochran, A., Coleman, M. L., Collins, G., Colwel, R. R., Contreras, M., Crary, B. B., Creer, S., Cristol, D. A., Crump, B. C., Cui, D., Daly, S. E., Davalos, L., Dawson, R. D., Defazio, J., Delsuc, F., Dionisi, H. M., Dominguez-Bello, M. G., Dowell, R., Dubinsky, E. A., Dunn, P. O., Ercolini, D., Espinoza, R. E., Ezenwa, V., Fenner, N., Findlay, H. S., Fleming, I. D., Fogliano, V., Forsman, A., Freeman, C., Friedman, E. S., Galindo, G., Garcia, L., Garcia-Amado, M. A., Garshelis, D., Gasser, R. B., Gerdts, G., Gibson, M. K., Gifford, I., Gill, R. T., Giray, T., Gittel, A., Golyshin, P., Gong, D., Grossart, H.-P., Guyton, K., Haig, S.-J., Hale, V., Hall, R. S., Hallam, S. J., Handley, K. M., Hasan, N. A., Haydon, S. R., Hickman, J. E., Hidalgo, G., Hofmockel, K. S., Hooker, J., Hulth, S., Hultman, J., Hyde, E., Ibáñez-Álamo, J. D., Jastrow, J. D., Jex, A. R., Johnson, L. S., Johnston, E. R., Joseph, S., Jurburg, S. D., Jurelevicius, D., Karlsson, A., Karlsson, R., Kauppinen, S., Kellogg, C. T. E., Kennedy, S. J., Kerkhof, L. J., King, G. M., Kling, G. W., Koehler, A. V., Krezalek, M., Kueneman, J., Lamendella, R., Landon, E. M., Lane-deGraaf, K., LaRoche, J., Larsen, P., Laverock, B., Lax, S., Lentino, M., Levin, I. I., Liancourt, P., Liang, W., Linz, A. M., Lipson, D. A., Liu, Y., Lladser, M. E., Lozada, M., Spirito, C. M., MacCormack, W. P., MacRae-Crerar, A., Magris, M., Martín-Platero, A. M., Martín-Vivaldi, M., Martínez, L. M., Martínez-Bueno, M., Marzinelli, E. M., Mason, O. U., Mayer, G. D., McDevitt-Irwin, J. M., McDonald, J., McGuire, K. L., McMahon, K. D., McMinds, R., Medina, M., Mendelson, J. R., Metcalf, J. L., Meyer, F., Michelangeli, F., Miller, K., Mills, D. A., Minich, J., Mocali, S., Moitinho-Silva, L., Moore, A., Morgan-Kiss, R. M., Munroe, P., Myrold, D., Neufeld, J. D., Ni, Y., Nicol, G. W., Nielsen, S., Nissimov, J. I., Niu, K., Nolan, M. J., Noyce, K., O’Brien, S. L., Okamoto, N., Orlando, L., Ortiz Castellano, Y., Osuolale, O., Oswald, W., Parnell, J., Peralta-Sánchez, J. M., Petraitis, P., Pfister, C., Pilon-Smits, E., Piombino, P., Pointing, S. B., Pollock, F. J., Potter, C., Prithiviraj, B., Quince, C., Rani, A., Ranjan, R., Rao, S., Rees, A. P., Richardson, M., Riebesell, U., Robinson, C., Rockne, K. J., Rodriguezl, S. M., Rohwer, F., Roundstone, W., Safran, R. J., Sangwan, N., Sanz, V., Schrenk, M., Schrenzel, M. D., Scott, N. M., Seger, R. L., Seguin-Orlando, A., Seldin, L., Seyler, L. M., Shakhsheer, B., Sheets, G. M., Shen, C., Shi, Y., Shin, H., Shogan, B. D., Shutler, D., Siegel, J., Simmons, S., Sjöling, S., Smith, D. P., Soler, J. J., Sperling, M., Steinberg, P. D., Stephens, B., Stevens, M. A., Taghavi, S., Tai, V., Tait, K., Tan, C. L., Tas, N., Taylor, D. L., Thomas, T., Timling, I., Turner, B. L., Urich, T., Ursell, L. K., van der Lelie, D., Van Treuren, W., van Zwieten, L., Vargas-Robles, D., Vega Thurber, R., Vitaglione, P., Walker, D. A., Walters, W. A., Wang, S., Wang, T., Weave, T., Webster, N. S., Wehrle, B., Weisenhorn, P., Weiss, S., Werner, J. J., West, K., Whitehead, A., Whitehead, S. R., Whittingham, L. A., Willerslev, E., Williams, A. E., Wood, S. A., Woodhams, D. C., Yang, Y., Zaneveld, J., Zarraonaindia, I., Zhang, Q. & Zhao, H., 23 Nov 2017, In: Nature. 551, 7681, p. 457-+

Research output: Contribution to journal › Article › peer-review

The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle

Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In: Marine Genomics. 36, p. 41-47

Research output: Contribution to journal › Article › peer-review

Selective microbial attachment to LDPE plastic beads during passage through the wastewater network

Tulloch, C. L., Cotterell, B. M., Pântea, I., Jones, D. L. & Golyshin, P. N., 1 Aug 2024, In: Chemosphere. 362, p. 142618

Research output: Contribution to journal › Article › peer-review

Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters

Tulloch, C. L., Bargiela, R., Williams, G. B., Chernikova, T. N., Cotterell, B. M., Wellington, E. M. H., Christie-Oleza, J., Thomas, D. N., Jones, D. L. & Golyshin, P. N., 29 Apr 2024, In: Environmental Microbiome. 19, 1, 27.

Research output: Contribution to journal › Article › peer-review

Inter-conversion of catalytic abilities in a bifunctional carboxyl/feruloyl-esterase from earthworm gut metagenome

Vieites, J. M., Ghazi, A., Beloqui, A., Polaina, J., Andreu, J. M., Golyshina, O. V., Nechitaylo, T. Y., Waliczek, A., Yakimov, M. M., Golyshin, P. N. & Ferrer, M., 1 Jan 2010, In: Microbial Biotechnology. 3, 1, p. 48-58

Research output: Contribution to journal › Article › peer-review

Molecular methods to study complex microbial communities

Vieites, J. M., Guazzaroni, M.-E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 2010, In: Methods in Molecular Biology. 668, p. 1-37 37 p.

Research output: Contribution to journal › Article › peer-review

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

Werner, J., Ferrer, M., Michel, G., Mann, A. J., Huang, S., Juarez, S., Ciordia, S., Albar, J. P., Alcaide, M., La Cono, V., Yakimov, M. M., Antunes, A., Taborda, M., da Costa, M. S., Hai, T., Glockner, F. O., Golyshina, O. V., Golyshin, P. N. & Teeling, H., 1 Aug 2014, In: Environmental Microbiology. 16, 8, p. 2525-2537

Research output: Contribution to journal › Article › peer-review

Harnessing extremophilic carboxylesterases for applications in polyester depolymerisation and plastic waste recycling

Williams, G., Ma, H., Khusnutdinova, A., Yakunin, A. & Golyshin, P., Aug 2023, In: Essays in Biochemistry. 67, 4, p. 715-729 15 p., EBC20220255.

Research output: Contribution to journal › Review article › peer-review

Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation

Yakimov, M. M., La Cono, V., Slepak, V. Z., La Spada, G., Arcadi, E., Messina, E., Borghini, M., Monticelli, L. S., Rojo, D., Barbas, C., Golyshina, O. V., Ferrer, M., Golyshin, P. N. & Giuliano, L., 19 Dec 2013, In: Scientific Reports. 3, p. 3554

Research output: Contribution to journal › Article › peer-review

A putative lichenysin A synthetase operon in Bacillus licheniformis: initial characterization

Yakimov, M. M., Kröger, A., Slepak, T. N., Giuliano, L., Timmis, K. N. & Golyshin, P. N., 20 Aug 1998, In: Biochimica et Biophysica Acta (BBA). 1399, 2-3, p. 141-53 13 p.

Research output: Contribution to journal › Article › peer-review

Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.

Yakimov, M. M., Denaro, R., Genovese, M., Cappello, S., D'Auria, G., Chernikova, T. N., Timmis, K. N., Golyshin, P. N. & Giuliano, L., 1 Sept 2005, In: Environmental Microbiology. 7, 9, p. 1426-1441

Research output: Contribution to journal › Article › peer-review

Recombinant acylheptapeptide lichenysin: high level of production by Bacillus subtilis cells

Yakimov, M. M., Giuliano, L., Timmis, K. N. & Golyshin, P. N., Apr 2000, In: Journal of Molecular Microbiology and Biotechnology. 2, 2, p. 217-24 8 p.

Research output: Contribution to journal › Article › peer-review

Thalassolituus oleivorans gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons

Yakimov, M. M., Giuliano, L., Denaro, R., Crisafi, E., Chernikova, T. N., Abraham, W. R., Luensdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Jan 2004, In: International Journal of Systematic and Evolutionary Microbiology. 54, 1, p. 141-148

Research output: Contribution to journal › Article › peer-review

Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium

Yakimov, M. M., Golyshin, P. N., Lang, S., Moore, E. R., Abraham, W. R., Lünsdorf, H. & Timmis, K. N., Apr 1998, In: International journal of systematic bacteriology. 48 Pt 2, p. 339-48 10 p.

Research output: Contribution to journal › Article › peer-review

Characterization of antarctic hydrocarbon-degrading bacteria capable of producing bioemulsifiers

Yakimov, M. M., Giuliano, L., Bruni, V., Scarfì, S. & Golyshin, P. N., Jul 1999, In: New microbiologica. 22, 3, p. 249-56 8 p.

Research output: Contribution to journal › Article › peer-review

Analysis of defence systems and a conjugative IncP-1 plasmid in the marine polyaromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME

Yakimov, M. M., Crisafi, F., Messina, E., Smedile, F., Lopatina, A., Denaro, R., Pieper, D. H., Golyshin, P. & Giuliano, L., 5 Jul 2016, In: Environmental Microbiology Reports. 8, 4, p. 508-519

Research output: Contribution to journal › Article › peer-review

Crude oil-induced structural shift of coastal bacterial communities of rod bay (Terra Nova Bay, Ross Sea, Antarctica) and characterization of cultured cold-adapted hydrocarbonoclastic bacteria.

Yakimov, M. M., Gentile, G., Bruni, V., Cappello, S., D'Auria, G., Golyshin, P. N. & Giuliano, L., 1 Sept 2004, In: Fems Microbiology Ecology. 49, 3, p. 419-432

Research output: Contribution to journal › Article › peer-review

Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)

Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 May 2002, In: Environmental Microbiology. 4, 5, p. 249-256

Research output: Contribution to journal › Article › peer-review

Structural characterization of lichenysin A components by fast atom bombardment tandem mass spectrometry

Yakimov, M. M., Abraham, W. R., Meyer, H., Laura Giuliano & Golyshin, P. N., 18 May 1999, In: Biochimica et Biophysica Acta (BBA). 1438, 2, p. 273-80 8 p.

Research output: Contribution to journal › Article › peer-review

Oleispira antarctica gen. nov., sp nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.

Yakimov, M. M., Giuliano, L., Gentile, G., Crisafi, E., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 May 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 3, p. 779-785

Research output: Contribution to journal › Article › peer-review

ComA-dependent transcriptional activation of lichenysin A synthetase promoter in Bacillus subtilis cells

Yakimov, M. M. & Golyshin, P. N., 31 Dec 1997, In: Biotechnology progress. 13, 6, p. 757-61 5 p.

Research output: Contribution to journal › Article › peer-review

Alcalilimnicola halodurans gen. nov., sp nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.

Yakimov, M. M., Giuliano, L., Chernikova, T. N., Gentile, G., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Nov 2001, In: International Journal of Systematic and Evolutionary Microbiology. 51, 6, p. 2133-2143

Research output: Contribution to journal › Article › peer-review

Calm and Frenzy: marine obligate hydrocarbonoclastic bacteria sustain ocean wellness

Yakimov, M. M., Bargiela, R. & Golyshin, P., 2 Feb 2022, In: Current Opinion in Biotechnology. 73, p. 337-345

Research output: Contribution to journal › Article › peer-review

A mechanistic understanding of polyethylene biodegradation by the marine bacterium Alcanivorax

Zadjelovic, V., Erni-Cassola, G., Obrador-Viel, T., Lester, D., Eley, Y., Gibson, M. I., Dorador, C., Golyshin, P., Black, S., Wellington, E. M. H. & Christie-Oleza, J., 15 Aug 2022, In: Journal of Hazardous Materials. 436

Research output: Contribution to journal › Article › peer-review

Combined whole-cell high-throughput functional screening for identification of new nicotinamidases/pyrazinamidases in metagenomic/polygenomic libraries

Zapata-Perez, R., Garcia-Saura, A. G., Jebbar, M., Golyshin, P. & Sanchez-Ferrer, A., Nov 2016, In: Frontiers in Microbiology. 7, 1915.

Research output: Contribution to journal › Article › peer-review

The use of biosurfactants in flotation: application for the removal of metal ions (vol 16, pg 1231, 2003)

Zouboulis, A. I., Matis, K. A., Lazaridis, N. K. & Golyshin, P. N., 1 Jan 2004, In: Minerals Engineering. 17, 1, p. 105

Research output: Contribution to journal › Article › peer-review