Isolation and characterization of novel lipases/esterases from a bovine rumen metagenome

Prive, F., Newbold, C. J., Kaderbhai, N. N., Girdwood, S. G., Golyshina, O. V., Golyshin, P. N., Scollan, N. D. & Huws, S. A., 11 Jan 2015, In: Applied Microbiology and Biotechnology. 99, 13, p. 5475-5485

Research output: Contribution to journal › Article › peer-review

The intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline

Doonan, J., Denman, S., Gertler, C., Pachebat, J. A., Golyshin, P. N. & McDonald, J. E., 1 Jan 2015, In: Journal of Applied Microbiology. 118, 1, p. 193-201 9 p.

Research output: Contribution to journal › Article › peer-review

Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats

Alcaide, M., Stogios, P. J., Lafraya, A., Tchigvintsev, A., Flick, R., Bargiela, R., Chernikova, T. N., Reva, O. N., Hai, T., Leggewie, C. C., Katzke, N., La Cono, V., Matesanz, R., Jebbar, M., Jaeger, K., Yakimov, M. M., Yakunin, A. F., Golyshin, P. N., Golyshina, O. V., Savchenko, A. & Ferrer, M., 17 Dec 2014, In: Environmental Microbiology. 17, 2, p. 332-345

Research output: Contribution to journal › Article › peer-review

Heterotrophic bicarbonate assimilation is the main process of de novo organic carbon synthesis in hadal zone of the Hellenic Trench, the deepest part of Mediterranean Sea

Golyshin, P., Yakimov, M. M., La Cono, V., Smedile, F., Crisafi, F., Arcadi, E., Leonardi, M., Decembrini, F., Catalfamo, M., Bargiela, R., Ferrer, M., Golyshin, P. & Giuliano, L., 1 Dec 2014, In: Environmental Microbiology Reports. p. 709-722

Research output: Contribution to journal › Article › peer-review

Alcanivorax borkumensis produces an extracellular siderophore in iron-limitation condition maintaining the hydrocarbon-degradation efficiency

Denaro, R., Crisafi, F., Russo, D., Genovese, M., Messina, E., Genovese, L., Carbone, M., Ciavatta, M. L., Ferrer, M., Golyshin, P. & Yakimov, M. M., 1 Oct 2014, In: Marine Genomics. 17, October, p. 43-52

Research output: Contribution to journal › Article › peer-review

The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria

Golyshina, O., Golyshin, P., Jan, C., Petersen, J. M., Werner, J., Teeling, H., Huang, S., Glockner, F. O., Golyshina, O. V., Dubilier, N., Golyshin, P. N., Jebbar, M. & Cambon-Bonavita, M. A., 1 Sept 2014, In: Environmental Microbiology. 16, 9, p. 2723-2738

Research output: Contribution to journal › Article › peer-review

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

Werner, J., Ferrer, M., Michel, G., Mann, A. J., Huang, S., Juarez, S., Ciordia, S., Albar, J. P., Alcaide, M., La Cono, V., Yakimov, M. M., Antunes, A., Taborda, M., da Costa, M. S., Hai, T., Glockner, F. O., Golyshina, O. V., Golyshin, P. N. & Teeling, H., 1 Aug 2014, In: Environmental Microbiology. 16, 8, p. 2525-2537

Research output: Contribution to journal › Article › peer-review

Effective bioremediation strategy for rapid in situ cleanup of anoxic marine sediments in mesocosm oil spill simulation

Golyshin, P., Genovese, M., Crisafi, F., Denaro, R., Cappello, S., Russo, D., Calogero, R., Santisi, S., Catalfamo, M., Modica, A., Smedile, F., Genovese, L., Golyshin, P. N., Giuliano, L. & Yakimov, M. M., 14 Apr 2014, In: Frontiers in Microbiology.

Research output: Contribution to journal › Article › peer-review

Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation

Yakimov, M. M., La Cono, V., Slepak, V. Z., La Spada, G., Arcadi, E., Messina, E., Borghini, M., Monticelli, L. S., Rojo, D., Barbas, C., Golyshina, O. V., Ferrer, M., Golyshin, P. N. & Giuliano, L., 19 Dec 2013, In: Scientific Reports. 3, p. 3554

Research output: Contribution to journal › Article › peer-review

Bioremediation of Southern Mediterranean oil polluted sites comes of age

Daffonchio, D., Ferrer, M., Mapelli, F., Cherif, A., Lafraya, A., Malkawi, H. I., Yakimov, M. M., Abdel-Fattah, Y. R., Blaghen, M., Golyshin, P. N., Kalogerakis, N., Boon, N., Magagnini, M. & Fava, F., 25 Sept 2013, In: New Biotechnology. 30, 6, p. 743-748

Research output: Contribution to journal › Article › peer-review

Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family

Alcaide, M., Tornés, J., Stogios, P. J., Xu, X., Gertler, C., Di Leo, R., Bargiela, R., Lafraya, A., Guazzaroni, M. E., López‑Cortés, N., Chernikova, T. N., Golyshina, O. V., Nechitaylo, T. Y., Plumeier∥, I., Pieper∥, D. H., Yakimov, M. M., Savchenko, A., Golyshin, P. N. & Ferrer, M., 15 Aug 2013, In: Biochemical Journal. 454, 1, p. 157-166

Research output: Contribution to journal › Article › peer-review

Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Jul 2013, In: Nature Communications. 4, p. 2156

Research output: Contribution to journal › Article › peer-review

Bioreduction of Sheep Carcasses Effectively Contains and Reduces Pathogen Levels under Operational and Simulated Breakdown Conditions

Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G., McKillen, J., McNair, I., McDonald, J. E. & Williams, A. P., 21 May 2013, In: Environmental Science and Technology. 47, 10, p. 5267–5275

Research output: Contribution to journal › Article › peer-review

Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)

Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Apr 2013, In: Genome Announcements. 1, 2, p. e00141-13

Research output: Contribution to journal › Article › peer-review

Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

Smedile, F., Messina, E., La Cono, V., Tsoy, O., Monticelli, L. S., Borghini, M., Giuliano, L., Golyshin, P. N., Mushegian, A. & Yakimov, M. M., 1 Jan 2013, In: Environmental Microbiology. 15, 1, p. 167-182

Research output: Contribution to journal › Article › peer-review

Gene Sets for Utilization of Primary and Secondary Nutrition Supplies in the Distal Gut of Endangered Iberian Lynx

Alcaide, M., Messina, E., Richter, M., Bargiela, R., Peplies, J., Huws, S. A., Newbold, C. J., Golyshin, P. N., Simón, M. A., López, G., Yakimov, M. M. & Ferrer, M., 12 Dec 2012, In: PLoS ONE. 7, 12, p. e51521

Research output: Contribution to journal › Article › peer-review

Temperature and water controls on vegetation emergence, microbial dynamics, and soil carbon and nitrogen fluxes in a high Arctic tundra ecosystem

Glanville, H. C., Hill, P. W., Maccarone, L. D., Golyshin, P. N., Murphy, D. V. & Jones, D. L., 1 Dec 2012, In: Functional Ecology. 26, 6, p. 1366-1380

Research output: Contribution to journal › Article › peer-review

Chemolithotrophic Microorganisms and Microbial Community from the Desert Soil as Candidates for the Phobos-Grunt Space Return Mission

Kotsyurbenko, O. R., Duplex, O. N. D., Roey, A., Golyshina, O. N., Golyshin, P. N. & Vorobyova, E. A., Dec 2012, In: Paleontological Journal. 46, 9, p. 1075-1076

Research output: Contribution to journal › Meeting Abstract › peer-review

Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail

Del Pozo, M. V., Fernández-Arrojo, L., Gil-Martínez, J., Montesinos, A., Chernikova, T. N., Nechitaylo, T. Y., Waliszek, A., Tortajada, M., Rojas, A., Huws, S. A., Golyshina, O., Newbold, C. M., Polaina, J., Ferrer, M. & Golyshin, P., 12 Sept 2012, In: Biotechnology for Biofuels. 5, p. 73

Research output: Contribution to journal › Article › peer-review

Composition and dynamics of biostimulated indigenous oil-degrading microbial consortia from the Irish, North and Mediterranean Seas: a mesocosm study

Golyshin, P., Gertler, C., Näther, D. J., Cappello, S., Gerdts, G., Quilliam, R. S., Yakimov, M. M. & Golyshin, P. N., 1 Sept 2012, In: Fems Microbiology Ecology. 81, 3, p. 520-536

Research output: Contribution to journal › Article › peer-review

ULIXES, unravelling and exploiting Mediterranean Sea microbial diversity and ecology for xenobiotics' and pollutants' clean up

Daffonchio, D., Mapelli, F., Cherif, A., Malkawi, H. I., Yakimov, M. M., Abdel-Fattah, Y. R., Blaghen, M., Golyshin, P. N., Ferrer, M., Kalogerakis, N., Boon, N., Magagnini, M. & Fava, F., Sept 2012, In: Reviews in Environmental Science and Bio/Technology. 11, 3, p. 207-211

Research output: Contribution to journal › Article › peer-review

Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica

Lemak, S., Tchigvintsev, A., Petit, P., Flick, R., Singer, A. U., Brown, G., Evdokimova, E., Egorova, O., Gonzalez, C. F., Chernikova, T. N., Yakimov, M. M., Kube, M., Reinhardt, R., Golyshin, P. N., Savchenko, A. & Yakunin, A. F., 15 Jul 2012, In: Biochemical Journal. 445, 2, p. 193-203

Research output: Contribution to journal › Article › peer-review

Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen

Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Jun 2012, In: PLoS ONE. 7, 6, p. e38134

Research output: Contribution to journal › Article › peer-review

Fate of pathogens in a simulated bioreduction system for livestock carcasses

Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G. & Williams, A. P., 1 May 2012, In: Waste Management. 32, 5, p. 933-938

Research output: Contribution to journal › Article › peer-review

Mineralization of low molecular weight carbon substrates in soil solution under laboratory and field conditions

Glanville, H., Rousk, J., Golyshin, P. & Jones, D. L., 1 May 2012, In: Soil Biology and Biochemistry. 48, p. 88-95

Research output: Contribution to journal › Article › peer-review

Methylorosula polaris gen. nov., sp. nov., an aerobic, facultatively methylotrophic psychrotolerant bacterium from tundra wetland soil

Golyshin, P., Berestovskaya, J. J., Kotsyurbenko, O. R., Tourova, T. P., Kolganova, T. V., Doronina, N. V., Golyshin, P. N. & Vasilyeva, L. V., 1 Mar 2012, In: International Journal of Systematic Evolutionary Microbiology. 62, Pt 3, p. 638-646

Research output: Contribution to journal › Article › peer-review

Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study

Ferrer, M., Werner, J., Chernikova, T. N., Bargiela, R., Fernández, L. L., Waldmann, J., Teeling, H., Golyshina, O. V., Glöckner, F. O., Yakimov, M. M. & Golyshin, P. N., 1 Jan 2012, In: Environmental Microbiology. 14, 1, p. 268-281

Research output: Contribution to journal › Article › peer-review

A novel platelet-activating factor acetylhydrolase discovered in a metagenome from the earthworm-associated microbial community

Navarro-Fernández, J., Nechitaylo, T. Y., Guerrero, J. A., Golyshina, O. V., García-Carmona, F., Sánchez-Ferrer, A. & Golyshin, P. N., 1 Nov 2011, In: Environmental Microbiology. 13, 11, p. 3036-3046

Research output: Contribution to journal › Article › peer-review

Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings

Golyshin, P., Golyshina, O., La Cono, V., Smedile, F., Bortoluzzi, G., Arcadi, E., Maimone, G., Messina, E., Borghini, M., Oliveri, E., Mazzola, S., L'Haridon, S., Toffin, L., Genovese, L., Ferrer, M., Giuliano, L., Golyshin, P. N. & Yakimov, M. M., 1 Aug 2011, In: Environmental Microbiology. 13, 8, p. 2250-2268

Research output: Contribution to journal › Article › peer-review

Contribution of crenarchaeal autotrophic ammonia oxidizers to the dark primary production in Tyrrhenian deep waters (Central Mediterranean Sea).

Golyshin, P., Yakimov, M. M., La Cono, V., Smedile, F., DeLuca, T., Juarez, S., Ciordia, S., Fernandez, M., Albar, J. P., Ferrer, M., Golyshin, P. N. & Giuliano, L., 1 Jun 2011, In: ISME Journal. 5, p. 945-961

Research output: Contribution to journal › Article › peer-review

Transcriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes

Sabirova, J. S., Becker, A., Lünsdorf, H., Nicaud, J.-M., Timmis, K. N. & Golyshin, P. N., Jun 2011, In: FEMS Microbiology Letters. 319, 2, p. 160-8 9 p.

Research output: Contribution to journal › Article › peer-review

The environmental and biosecurity characteristics of livestock carcass disposal methods: a review.

Gwyther, C. L., Williams, A. P., Golyshin, P. N., Edwards-Jones, G. & Jones, D. L., 1 Apr 2011, In: Waste Management. 31, 4, p. 767-778

Research output: Contribution to journal › Article › peer-review

Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species.

Beloqui, A., Nechitaylo, T. Y., Lopez-Cortes, N., Ghazi, A., Guazzaroni, M. E., Polaina, J., Strittmatter, A. W., Reva, O., Waliczek, A., Yakimov, M. M., Golyshina, O. V., Ferrer, M. & Golyshin, P. N., 1 Sept 2010, In: Applied and Environmental Microbiology. 76, 17, p. 5934-5946

Research output: Contribution to journal › Article › peer-review

Genomic signatures of fifth autotrophic carbon assimilation pathway in bathypelagic Crenarchaeota

La Cono, V., Smedile, F., Ferrer, M., Golyshin, P. N., Giuliano, L. & Yakimov, M. M., Sept 2010, In: Microbial Biotechnology. 3, 5, p. 595-606 12 p.

Research output: Contribution to journal › Article › peer-review

Novel Hybrid Esterase-Haloacid Dehalogenase Enzyme

Beloqui, A., Polaina, J., Maria Vieites, J., Reyes-Duarte, D., Torres, R., Golyshina, O. V., Chernikova, T. N., Waliczek, A., Aharoni, A., Yakimov, M. M., Timmis, K. N., Golyshin, P. N. & Ferrer, M., 16 Aug 2010, In: ChemBioChem. 11, 14, p. 1975-1978

Research output: Contribution to journal › Article › peer-review

Screening metagenomic libraries for laccase activities

Ferrer, M., Beloqui, A. & Golyshin, P. N., Aug 2010, In: Methods in Molecular Biology. 668, p. 189-202 14 p.

Research output: Contribution to journal › Article › peer-review

Systems approaches to microbial communities and their functioning

Röling, W. F. M., Ferrer, M. & Golyshin, P. N., Aug 2010, In: Current Opinion in Biotechnology. 21, 4, p. 532-8 7 p.

Research output: Contribution to journal › Review article › peer-review

Fate of prions in soil: degradation of recombinant prion in aqueous extracts from soil and casts of two earthworm species.

Golyshin, P., Nechitaylo, T. Y., Timmis, K. N., Byzov, B. A., Kurakov, A. V., Belogolova, E., Jones, D. L., Ferrer, M. & Golyshin, P. N., 1 Jul 2010, In: Soil Biology and Biochemistry. 42, 7, p. 1168-1171

Research output: Contribution to journal › Article › peer-review

A mesocosm study of the changes in marine flagellate and ciliate communities in a crude oil bioremediation trial

Gertler, C., Näther, D. J., Gerdts, G., Malpass, M. C. & Golyshin, P. N., Jul 2010, In: Microbial Ecology. 60, 1, p. 180-91 12 p.

Research output: Contribution to journal › Article › peer-review

Effect of the earthworms lumbricus terrestris and Aporrectodea caliginosa on bacterial diversity in soil.

Nechitaylo, T. Y., Yakimov, M. M., Godinho, M., Timmis, K. N., Belogolova, E., Byzov, B. A., Kurakov, A. V., Jones, D. L. & Golyshin, P. N., 1 Apr 2010, In: Microbial Ecology. 59, 3, p. 574-587

Research output: Contribution to journal › Article › peer-review

Inter-conversion of catalytic abilities in a bifunctional carboxyl/feruloyl-esterase from earthworm gut metagenome

Vieites, J. M., Ghazi, A., Beloqui, A., Polaina, J., Andreu, J. M., Golyshina, O. V., Nechitaylo, T. Y., Waliczek, A., Yakimov, M. M., Golyshin, P. N. & Ferrer, M., 1 Jan 2010, In: Microbial Biotechnology. 3, 1, p. 48-58

Research output: Contribution to journal › Article › peer-review

Molecular methods to study complex microbial communities

Vieites, J. M., Guazzaroni, M.-E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 2010, In: Methods in Molecular Biology. 668, p. 1-37 37 p.

Research output: Contribution to journal › Article › peer-review

Acidiplasma aeolicum gen. nov., sp nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. Nov

Golyshina, O. V., Yakimov, M. M., Lunsdorf, H., Ferrer, M., Nimtz, M., Timmis, K. N., Wray, V., Tindall, B. J. & Golyshin, P. N., 1 Nov 2009, In: International Journal of Systematic and Evolutionary Microbiology. 59, p. 2815-2823

Research output: Contribution to journal › Article › peer-review

Microbial consortia in mesocosm bioremediation trial using oil sorbents, slow-release fertilizer and bioaugmentation.

Golyshin, P., Gertler, C., Gerdts, G., Timmis, K. N. & Golyshin, P. N., 1 Aug 2009, In: Fems Microbiology Ecology. 69, 2, p. 288-300

Research output: Contribution to journal › Article › peer-review

Populations of heavy fuel oil-degrading marine microbial community in presence of oil sorbent materials.

Gertler, C., Gerdts, G., Timmis, K. N., Yakimov, M. M. & Golyshin, P. N., 1 Aug 2009, In: Journal of Applied Microbiology. 107, 2, p. 590-605

Research output: Contribution to journal › Article › peer-review

A salt lake extremophile, Paracoccus bogoriensis sp nov., efficiently produces xanthophyll carotenoids

Osanjo, G. O., Muthike, E. W., Tsuma, L., Okoth, M. W., Bulimo, W. D., Luensdorf, H., Abraham, W.-R., Dion, M., Timmis, K. N., Golyshin, P. N. & Mulaa, F. J., Aug 2009, In: African Journal of Microbiology Research. 3, 8, p. 426-433

Research output: Contribution to journal › Article › peer-review

Микроорганизмы из пищеварительного тракта дождевых червей

Byzov, B. A., Nechitaĭlo, T. I., Bumazhkin, B. K., Kurakov, A. V., Golyshin, P. N. & Zviagintsev, D. G., 8 Jul 2009, In: Mikrobiologiia. 78, 3, p. 404-13 10 p.

Research output: Contribution to journal › Article › peer-review