Dr Tatyana Chernikova

Research Officer

  1. Article › Research › Peer-reviewed
  2. Published

    Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

    Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Mar 2017, In : Scientific Reports. 7, 44103, 44103.

    Research output: Contribution to journalArticle

  3. Published

    Alcalilimnicola halodurans gen. nov., sp nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.

    Yakimov, M. M., Giuliano, L., Chernikova, T. N., Gentile, G., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Nov 2001, In : International Journal of Systematic and Evolutionary Microbiology. 51, 6, p. 2133-2143

    Research output: Contribution to journalArticle

  4. Published

    Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature

    Bargiela, R., Mapelli, F., Rojo, D., Chouaia, B., Tornés, J., Borin, S., Richter, M., Del Pozo, M. V., Cappello, S., Gertler, C., Genovese, M., Denaro, R., Martínez-Martínez, M., Fodelianakis, S., Amer, R. A., Bigazzi, D., Han, X., Chen, J., Chernikova, T. N., Golyshina, O. V., Mahjoubi, M., Jaouanil, A., Benzha, F., Magagnini, M., Hussein, E., Al-Horani, F., Cherif. A., N. V., Blaghen, M., Abdel-Fattah, Y. R., Kalogerakis, N., Barbas, C., Malkawi, H. I., Golyshin, P. N., Yakimov, M. M., Daffonchio, D. & Ferrer, M., 29 Jun 2015, In : Scientific Reports. 5, p. Article Number 11651

    Research output: Contribution to journalArticle

  5. Published

    Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.

    Ferrer, M., Beloqui, A., Golyshina, O. V., Plou, F. J., Neef, A., Chernikova, T. N., Fernandez-Arrojo, L., Ghazi, I., Ballesteros, A., Elborough, K., Timmis, K. N. & Golyshin, P. N., 1 Jan 2007, In : Biotechnology Journal. 2, 2, p. 207-213

    Research output: Contribution to journalArticle

  6. Published

    Bioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines

    Coscolín, C., Katzke, N., Garcia-Moyano, A., Navarro-Fernández, J., Almendral, D., Martinez-Martinez, M., Bollinger, A., Bargiela, R., Gerler, C., Chernikova, T. N., Rojo, D., Barbas, C., Tran, H., Golyshina, O. V., Koch, R., Yakimov, M. M., Bjerga, G. E. K., Golyshin, P. N., Jaeger, K-E. & Ferrer, M., 9 Jan 2019, In : Applied and Environmental Microbiology. 85, 2, e02404-18.

    Research output: Contribution to journalArticle

  7. Published

    Chaperonins govern growth of Escherichia coli at low temperatures.

    Ferrer, M., Chernikova, T. N., Yakimov, M. M., Golyshin, P. N. & Timmis, K. N., 1 Nov 2003, In : Nature Biotechnology. 21, 11, p. 1266-1267

    Research output: Contribution to journalArticle

  8. Published

    Determinants and prediction of esterase substrate promiscuity patterns

    Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, In : ACS Chemical Biology. 13, 1, p. 225-234

    Research output: Contribution to journalArticle

  9. Published

    Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase

    Placido, A., Hai, T., Ferrer, M., Chernikova, T. N., Distaso, M. A., Armstrong, D., Yakunin, A. F., Toshchakov, S. V., Yakimov, M. M., Kublanov, I. V., Golyshina, O., Pesole, G., Ceci, L. R. & Golyshin, P., 1 Dec 2015, In : Applied Microbiology and Biotechnology. 99, 23, p. 10031-10046

    Research output: Contribution to journalArticle

  10. Published

    Expression of a temperature-sensitive esterase in anovel chaperone-based Escherichia coli strain.

    Ferrer, M., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2004, In : Applied and Environmental Microbiology. 70, 8, p. 4499-4504

    Research output: Contribution to journalArticle

  11. Published

    Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen

    Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Jun 2012, In : PLoS ONE. 7, 6, p. e38134

    Research output: Contribution to journalArticle

  12. Published

    Functional consequences of single:double ring transitions in chaperonins: life in the cold.

    Ferrer, M., Lunsdorf, H., Chernikova, T. N., Yakimov, M., Timmis, K. N. & Golyshin, P. N., 1 Jul 2004, In : Molecular Microbiology. 53, 1, p. 167-182

    Research output: Contribution to journalArticle

  13. Published

    Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)

    Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Apr 2013, In : Genome Announcements. 1, 2, p. e00141-13

    Research output: Contribution to journalArticle

  14. Published

    Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

    Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Jul 2013, In : Nature Communications. 4, p. 2156

    Research output: Contribution to journalArticle

  15. Published

    Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.

    Golyshin, P. N., Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lunsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Puhler, A. & Timmis, K. N., 19 Dec 2003, In : Journal of Biotechnology. 106, 2-3, p. 215-220

    Research output: Contribution to journalArticle

  16. Published

    Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.

    Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Jul 2006, In : Nature Biotechnology. 24, 8, p. 997-1004 8 p.

    Research output: Contribution to journalArticle

  17. Published

    Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data

    Bourguignon, N., Bargiela, R., Rojo, D., Chernikova, T., Lopez de Rodas, S. A., Garcia-Cantalejo, J., Nather, D. J., Golyshin, P., Barbas, C., Ferrero, M. & Ferrer, M., 1 Dec 2016, In : World Journal of Microbiology and Biotechnology. 32, 201

    Research output: Contribution to journalArticle

  18. Published

    Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

    Bargiela, R., Herbst, F. A., Martinez-Martinez, M., Seifert, J., Rojo, D., Cappello, S., Genovese, M., Crisafi, F., Denaro, R., Chernikova, T. N., Barbas, C., von Bergen, M., Yakimov, M. M., Ferrer, M. & Golyshin, P. N., 27 Aug 2015, In : Proteomics. 15, 20, p. 3508-3520

    Research output: Contribution to journalArticle

  19. Published

    Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)

    Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 May 2002, In : Environmental Microbiology. 4, 5, p. 249-256

    Research output: Contribution to journalArticle

  20. Published

    Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin.

    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Dos Santos, V. A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Aug 2005, In : Chemistry and Biology. 12, 8, p. 895-904

    Research output: Contribution to journalArticle

  21. Published

    Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail

    Del Pozo, M. V., Fernández-Arrojo, L., Gil-Martínez, J., Montesinos, A., Chernikova, T. N., Nechitaylo, T. Y., Waliszek, A., Tortajada, M., Rojas, A., Huws, S. A., Golyshina, O., Newbold, C. M., Polaina, J., Ferrer, M. & Golyshin, P., 12 Sep 2012, In : Biotechnology for Biofuels. 5, p. 73

    Research output: Contribution to journalArticle

  22. Published

    Monaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK

    Chernikova, T., Dallimore, J., Lunsdorf, H., Heipieper, H. J. & Golyshin, P., 1 Sep 2017, In : International Journal of Systematic Evolutionary Microbiology. 67, p. 3310-3317

    Research output: Contribution to journalArticle

  23. Published

    Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.

    Yakimov, M. M., Denaro, R., Genovese, M., Cappello, S., D'Auria, G., Chernikova, T. N., Timmis, K. N., Golyshin, P. N. & Giuliano, L., 1 Sep 2005, In : Environmental Microbiology. 7, 9, p. 1426-1441

    Research output: Contribution to journalArticle

  24. Published

    Niche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2.

    Sabirova, J. S., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2008, In : FEMS Microbiology Letters. 285, 1, p. 89-96

    Research output: Contribution to journalArticle

  25. Published

    Novel Hybrid Esterase-Haloacid Dehalogenase Enzyme

    Beloqui, A., Polaina, J., Maria Vieites, J., Reyes-Duarte, D., Torres, R., Golyshina, O. V., Chernikova, T. N., Waliczek, A., Aharoni, A., Yakimov, M. M., Timmis, K. N., Golyshin, P. N. & Ferrer, M., 16 Aug 2010, In : ChemBioChem. 11, 14, p. 1975-1978

    Research output: Contribution to journalArticle

  26. Published

    Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora.

    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Reyes-Duarte, D., Dos Santos, V. A., Strompl, C., Elborough, K., Jarvis, G., Neef, A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Dec 2005, In : Environmental Microbiology. 7, 12, p. 1996-2010

    Research output: Contribution to journalArticle

  27. Published

    Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons.

    Golyshin, P. N., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Yakimov, M. M., 1 May 2002, In : International Journal of Systematic and Evolutionary Microbiology. 52, 3, p. 901-911

    Research output: Contribution to journalArticle

  28. Published

    Oleispira antarctica gen. nov., sp nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.

    Yakimov, M. M., Giuliano, L., Gentile, G., Crisafi, E., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 May 2003, In : International Journal of Systematic and Evolutionary Microbiology. 53, 3, p. 779-785

    Research output: Contribution to journalArticle

  29. Published

    Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats

    Alcaide, M., Stogios, P. J., Lafraya, A., Tchigvintsev, A., Flick, R., Bargiela, R., Chernikova, T. N., Reva, O. N., Hai, T., Leggewie, C. C., Katzke, N., La Cono, V., Matesanz, R., Jebbar, M., Jaeger, K., Yakimov, M. M., Yakunin, A. F., Golyshin, P. N., Golyshina, O. V., Savchenko, A. & Ferrer, M., 17 Dec 2014, In : Environmental Microbiology. 17, 2, p. 332-345

    Research output: Contribution to journalArticle

  30. Published

    Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters

    Hajighasemi, M., Tchigvintsev, A., Nocek, B., Flick, R., Popovic, A., Hai, T., Khusnutdinova, A. N., Brown, G., Xu, X., Cui, H., Anstett, J., Chernikova, T., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Golyshina, O., Savchenko, A., Golyshin, P., Edwards, E. A. & Yakunin, A. F., 6 Nov 2018, In : Environmental Science and Technology. 52, 21, p. 12388-12401

    Research output: Contribution to journalArticle

  31. Published

    Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family

    Alcaide, M., Tornés, J., Stogios, P. J., Xu, X., Gertler, C., Di Leo, R., Bargiela, R., Lafraya, A., Guazzaroni, M. E., López‑Cortés, N., Chernikova, T. N., Golyshina, O. V., Nechitaylo, T. Y., Plumeier∥, I., Pieper∥, D. H., Yakimov, M. M., Savchenko, A., Golyshin, P. N. & Ferrer, M., 15 Aug 2013, In : Biochemical Journal. 454, 1, p. 157-166

    Research output: Contribution to journalArticle

  32. Published

    Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica

    Lemak, S., Tchigvintsev, A., Petit, P., Flick, R., Singer, A. U., Brown, G., Evdokimova, E., Egorova, O., Gonzalez, C. F., Chernikova, T. N., Yakimov, M. M., Kube, M., Reinhardt, R., Golyshin, P. N., Savchenko, A. & Yakunin, A. F., 15 Jul 2012, In : Biochemical Journal. 445, 2, p. 193-203

    Research output: Contribution to journalArticle

  33. Published

    Thalassolituus oleivorans gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons

    Yakimov, M. M., Giuliano, L., Denaro, R., Crisafi, E., Chernikova, T. N., Abraham, W. R., Luensdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Jan 2004, In : International Journal of Systematic and Evolutionary Microbiology. 54, 1, p. 141-148

    Research output: Contribution to journalArticle

  34. Published

    The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes

    Tchigvintsev, A., Tran, H., Popvic, A., Kovacic, F., Brown, G., Flick, R., Hajighasemi, M., Egorova, O., Somody, J. C., Tchigvintsev, D., Khusnutdinova, A., Chernikova, T. N., Golyshina, O., Yakimov, M. M., Savchenko, A., Golyshin, P., Jaeger, K. E. & Yakunin, A. F., 1 Mar 2015, In : Applied Microbiology and Biotechnology. 99, 5, p. 2165-2178

    Research output: Contribution to journalArticle

  35. Published

    The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle

    Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In : Marine Genomics. 36, p. 41-47

    Research output: Contribution to journalArticle

  36. Published

    Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study

    Ferrer, M., Werner, J., Chernikova, T. N., Bargiela, R., Fernández, L. L., Waldmann, J., Teeling, H., Golyshina, O. V., Glöckner, F. O., Yakimov, M. M. & Golyshin, P. N., 1 Jan 2012, In : Environmental Microbiology. 14, 1, p. 268-281

    Research output: Contribution to journalArticle

  37. Meeting Abstract › Research › Peer-reviewed
  38. Published

    Multidrug Resistance and High Prevalence of class 1 Integrons in Escherichia coli Isolated from Irrigation Water and Vegetables in Parts of Nsukka and Enugu, Nigeria

    Chigor, C. B., Ibangha, I-A. I., Onuora, V. C., Omotosho, O. E., Chernikova, T., Chigor, V. N. & Golyshin, P., 1 Apr 2017, In : Faseb Journal. 31, S1, 777.22.

    Research output: Contribution to journalMeeting Abstract

  39. Chapter › Research › Peer-reviewed
  40. Published

    Metagenomics as a tool for enzyme discovery: hydrolytic enzymes from marine-related metagenomes

    Popovic, A., Tchigvintsev, A., Tran, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Golyshin, P. N. & Yakunin, A. F., 2015, Prokaryotic Systems Biology. Springer, p. 1-20 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  41. Patent › Research
  42. Published

    Cellulases from rumen.

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C., Timmis, K. N., Elborough, K. & Jarvis, G., 4 Jan 2006, Patent No. EP1765999. International Patent Application WO 2006/00375 European Patent PCT/EP2005/053104.

    Research output: Patent

  43. Published

    New Esterases from rumen.

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C. & Timmis, K. N., 18 Apr 2007, Patent No. International Application WO 2006/003009 European Patent PCT/EP2005/007305.

    Research output: Patent

  44. Published

    Polypeptides with laccase activity

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C. & Timmis, K. N., 28 Aug 2007, Patent No. European Patent EP1826266

    Research output: Patent

  45. Published

    Transgenic organisms with lower growth temperature.

    Ferrer, M., Golyshin, P. N., Chernikova, T. N., Timmis, K. N. & Yakimov, M. M., 28 Jun 2006, Patent No. European Patent EP1673442 B1

    Research output: Patent