Dr Tatyana Chernikova
Research Officer
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Expression of a temperature-sensitive esterase in anovel chaperone-based Escherichia coli strain.
Ferrer, M., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2004, In: Applied and Environmental Microbiology. 70, 8, p. 4499-4504Research output: Contribution to journal › Article › peer-review
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Functional consequences of single:double ring transitions in chaperonins: life in the cold.
Ferrer, M., Lunsdorf, H., Chernikova, T. N., Yakimov, M., Timmis, K. N. & Golyshin, P. N., 1 Jul 2004, In: Molecular Microbiology. 53, 1, p. 167-182Research output: Contribution to journal › Article › peer-review
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Utilization of low-molecular-weight organic compounds by the filterable fraction of a lotic microbiome
Ghuneim, L. A., Distaso, M., Chernikova, T., Bargiela, R., Lunev, E. A., Korzhenkov, A. A., Toshchakov, S. V., Rojo, D., Barbas, C., Ferrer, M., Golyshina, O., Golyshin, P. & Jones, D. L., 1 Feb 2021, In: Fems Microbiology Ecology. 97, 2Research output: Contribution to journal › Article › peer-review
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Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.
Golyshin, P. N., Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lunsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Puhler, A. & Timmis, K. N., 19 Dec 2003, In: Journal of Biotechnology. 106, 2-3, p. 215-220Research output: Contribution to journal › Article › peer-review
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Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp nov., a novel marine bacterium that obligately utilizes hydrocarbons.
Golyshin, P. N., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Yakimov, M. M., 1 May 2002, In: International Journal of Systematic and Evolutionary Microbiology. 52, 3, p. 901-911Research output: Contribution to journal › Article › peer-review
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Oleispira
Golyshin, P., Ferrer, M., Chernikova, T., Golyshina, O. & Yakimov, M. M., 3 Dec 2009, The Handbook of hydrocarbon and lipid microbiology. Timmis, K. N., McGenity, T. J., van der Meer, J. R. & de Lorenzo, V. (eds.). Springer, p. 1755-1763Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Aerobic Hydrocarbon-Degrading Gammaproteobacteria: Oleiphilaceae and Relatives
Golyshin, P., Jaeger, K-E., Toshchakov, S. V., Golyshina, O., Chernikova, T., Yakimov, M. M. & Ferrer, M., 27 Nov 2019, Handbook of Hydrocarbon and Lipid Microbiology Series. Taxonomy, Genomics and Ecophysiology of Hydrocarbon-Degrading Microbes. McGenity, T. J. (ed.). Springer, p. 153-166Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica
Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Jul 2013, In: Nature Communications. 4, p. 2156Research output: Contribution to journal › Article › peer-review
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Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)
Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Apr 2013, In: Genome Announcements. 1, 2, p. e00141-13Research output: Contribution to journal › Article › peer-review
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Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters
Hajighasemi, M., Tchigvintsev, A., Nocek, B., Flick, R., Popovic, A., Hai, T., Khusnutdinova, A. N., Brown, G., Xu, X., Cui, H., Anstett, J., Chernikova, T., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Golyshina, O., Savchenko, A., Golyshin, P., Edwards, E. A. & Yakunin, A. F., 6 Nov 2018, In: Environmental Science and Technology. 52, 21, p. 12388-12401Research output: Contribution to journal › Article › peer-review
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Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica
Lemak, S., Tchigvintsev, A., Petit, P., Flick, R., Singer, A. U., Brown, G., Evdokimova, E., Egorova, O., Gonzalez, C. F., Chernikova, T. N., Yakimov, M. M., Kube, M., Reinhardt, R., Golyshin, P. N., Savchenko, A. & Yakunin, A. F., 15 Jul 2012, In: Biochemical Journal. 445, 2, p. 193-203Research output: Contribution to journal › Article › peer-review
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Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes
Marasco, R., Fusi, M., Coscolín, C., Borozzi, A., Almendral, D., Bargiela, R., Gohlke neé Nutschel, C., Dittrich, J., Gohlke, H., Matesanz, R., Sanchez-Carrillo, S., Mapelli, F., Chernikova, T., Golyshin, P., Ferrer, M. & Daffonchio, D., 24 Feb 2023, In: Nature Communications. 14, 1, 1045.Research output: Contribution to journal › Article › peer-review
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Determinants and prediction of esterase substrate promiscuity patterns
Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, In: ACS Chemical Biology. 13, 1, p. 225-234Research output: Contribution to journal › Article › peer-review
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Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase
Placido, A., Hai, T., Ferrer, M., Chernikova, T. N., Distaso, M. A., Armstrong, D., Yakunin, A. F., Toshchakov, S. V., Yakimov, M. M., Kublanov, I. V., Golyshina, O., Pesole, G., Ceci, L. R. & Golyshin, P., 1 Dec 2015, In: Applied Microbiology and Biotechnology. 99, 23, p. 10031-10046Research output: Contribution to journal › Article › peer-review
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Metagenomics as a tool for enzyme discovery: hydrolytic enzymes from marine-related metagenomes
Popovic, A., Tchigvintsev, A., Tran, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Golyshin, P. N. & Yakunin, A. F., 2015, Prokaryotic Systems Biology. Springer, p. 1-20 20 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
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Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families
Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Mar 2017, In: Scientific Reports. 7, 44103, 44103.Research output: Contribution to journal › Article › peer-review
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Niche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2.
Sabirova, J. S., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 Aug 2008, In: FEMS Microbiology Letters. 285, 1, p. 89-96Research output: Contribution to journal › Article › peer-review
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Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Jul 2006, In: Nature Biotechnology. 24, 8, p. 997-1004 8 p.Research output: Contribution to journal › Article › peer-review
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The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes
Tchigvintsev, A., Tran, H., Popvic, A., Kovacic, F., Brown, G., Flick, R., Hajighasemi, M., Egorova, O., Somody, J. C., Tchigvintsev, D., Khusnutdinova, A., Chernikova, T. N., Golyshina, O., Yakimov, M. M., Savchenko, A., Golyshin, P., Jaeger, K. E. & Yakunin, A. F., 1 Mar 2015, In: Applied Microbiology and Biotechnology. 99, 5, p. 2165-2178Research output: Contribution to journal › Article › peer-review
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The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle
Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In: Marine Genomics. 36, p. 41-47Research output: Contribution to journal › Article › peer-review
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Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters
Tulloch, C. L., Bargiela, R., Williams, G. B., Chernikova, T. N., Cotterell, B. M., Wellington, E. M. H., Christie-Oleza, J., Thomas, D. N., Jones, D. L. & Golyshin, P. N., 29 Apr 2024, In: Environmental Microbiome. 19, 1, 27.Research output: Contribution to journal › Article › peer-review
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Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)
Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 May 2002, In: Environmental Microbiology. 4, 5, p. 249-256Research output: Contribution to journal › Article › peer-review
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Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.
Yakimov, M. M., Denaro, R., Genovese, M., Cappello, S., D'Auria, G., Chernikova, T. N., Timmis, K. N., Golyshin, P. N. & Giuliano, L., 1 Sept 2005, In: Environmental Microbiology. 7, 9, p. 1426-1441Research output: Contribution to journal › Article › peer-review
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Oleispira antarctica gen. nov., sp nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water.
Yakimov, M. M., Giuliano, L., Gentile, G., Crisafi, E., Chernikova, T. N., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 May 2003, In: International Journal of Systematic and Evolutionary Microbiology. 53, 3, p. 779-785Research output: Contribution to journal › Article › peer-review
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Alcalilimnicola halodurans gen. nov., sp nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.
Yakimov, M. M., Giuliano, L., Chernikova, T. N., Gentile, G., Abraham, W. R., Lunsdorf, H., Timmis, K. N. & Golyshin, P. N., 1 Nov 2001, In: International Journal of Systematic and Evolutionary Microbiology. 51, 6, p. 2133-2143Research output: Contribution to journal › Article › peer-review