School of Environmental & Natural Sciences

  1. Published

    Metagenomics for Mining New Genetic Resources of Microbial Communities.

    Ferrer, M., Beloqui, A., Timmis, K. N. & Golyshin, P. N., 1 Jan 2009, In: Journal of Molecular Microbiology and Biotechnology. 16, 1-2, p. 109-123

    Research output: Contribution to journalArticlepeer-review

  2. Published

    Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study

    Ferrer, M., Werner, J., Chernikova, T. N., Bargiela, R., Fernández, L. L., Waldmann, J., Teeling, H., Golyshina, O. V., Glöckner, F. O., Yakimov, M. M. & Golyshin, P. N., 1 Jan 2012, In: Environmental Microbiology. 14, 1, p. 268-281

    Research output: Contribution to journalArticlepeer-review

  3. Published

    A novel alpha-glucosidase from the acidophilic archaeon Ferroplasma acidiphilum strain Y with high transglycosylation activity and an unusual catalytic nucleophile

    Ferrer, M., Golyshina, O. V., Plou, F. J., Timmis, K. N. & Golyshin, P. N., 15 Oct 2005, In: Biochemical Journal. 391, 2, p. 269-276 8 p.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Mining enzymes from extreme environments.

    Ferrer, M., Golyshina, O., Beloqui, A. & Golyshin, P. N., 1 Jun 2007, In: Current Opinion in Microbiology. 10, 3, p. 207-214

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin.

    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Dos Santos, V. A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Aug 2005, In: Chemistry and Biology. 12, 8, p. 895-904

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.

    Ferrer, M., Beloqui, A., Golyshina, O. V., Plou, F. J., Neef, A., Chernikova, T. N., Fernandez-Arrojo, L., Ghazi, I., Ballesteros, A., Elborough, K., Timmis, K. N. & Golyshin, P. N., 1 Jan 2007, In: Biotechnology Journal. 2, 2, p. 207-213

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Screening metagenomic libraries for laccase activities

    Ferrer, M., Beloqui, A. & Golyshin, P. N., Aug 2010, In: Methods in Molecular Biology. 668, p. 189-202 14 p.

    Research output: Contribution to journalArticlepeer-review

  8. Published

    New Esterases from rumen.

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C. & Timmis, K. N., 18 Apr 2007, Patent No. International Application WO 2006/003009 European Patent PCT/EP2005/007305.

    Research output: Patent

  9. Published

    Chaperonins govern growth of Escherichia coli at low temperatures.

    Ferrer, M., Chernikova, T. N., Yakimov, M. M., Golyshin, P. N. & Timmis, K. N., 1 Nov 2003, In: Nature Biotechnology. 21, 11, p. 1266-1267

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen

    Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Jun 2012, In: PLoS ONE. 7, 6, p. e38134

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Functional consequences of single:double ring transitions in chaperonins: life in the cold.

    Ferrer, M., Lunsdorf, H., Chernikova, T. N., Yakimov, M., Timmis, K. N. & Golyshin, P. N., 1 Jul 2004, In: Molecular Microbiology. 53, 1, p. 167-182

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Cellulases from rumen.

    Ferrer, M., Golyshin, P. N., Golyshina, O. V., Chernikova, T. N., Strompl, C., Timmis, K. N., Elborough, K. & Jarvis, G., 4 Jan 2006, Patent No. EP1765999. International Patent Application WO 2006/00375 European Patent PCT/EP2005/053104.

    Research output: Patent

  13. Published

    Novel maltotriose esters enhance biodegradation of Aroclor 1242 by Burkholderia cepacia LB400

    Ferrer, M., Golyshin, P. N. & Timmis, K. N., 1 Aug 2003, In: World Journal of Microbiology and Biotechnology. 19, 6, p. 637-643

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Effect of increased atmospheric CO2 on the performance of an aquatic detritivore through changes in water temperature and litter quality.

    Ferreira, V., Goncalves, A. L., Godbold, D. L. & Canhoto, C., 1 Dec 2010, In: Global Change Biology. 16, 12, p. 3284-3296

    Research output: Contribution to journalArticlepeer-review

  15. Published

    Rates and patterns of hybridisation in baboons (genus Papio) under different degrees of anthropogenic climate change

    Fernandes, A., Gomes, L., Hill, S. E. & Winder, I. C., Apr 2020.

    Research output: Contribution to conferenceAbstractpeer-review

  16. Published

    Drought-induced carbon loss in peatlands

    Fenner, N. & Freeman, C., 20 Nov 2011, In: Nature Geoscience. 4, p. 895-900

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Effects of Climate Change on Peatland Reservoirs: A DOC Perspective

    Fenner, N., Meadham, J., Jones, T., Hayes, F. & Freeman, C., Jul 2021, In: Global Biogeochemical Cycles. 35, 7, e2021GB006992.

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Hydrological controls on dissolved organic carbon production and release from UK peatlands.

    Fenner, N., Freeman, C., Worrall, F., Baird, A. J. (ed.), Belyea, L. R. (ed.), Xavier Comas, A. S. (ed.) & Slater, L. D. (ed.), 1 Jan 2009, Carbon Cycling in Northern Peatlands. 2009 ed. American Geophysical Union

    Research output: Chapter in Book/Report/Conference proceedingChapter

  19. Published

    Carbon preservation in humic lakes; a hierarchical regulatory pathway

    Fenner, N. & Freeman, C., 1 Mar 2013, In: Global Change Biology. 19, 3, p. 775-784

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Observations of a seasonally shifting thermal optimum in peatland carbon-cycling processes; implications for the global carbon cycle and soil enzyme methodologies.

    Fenner, N., Freeman, C. & Reynolds, B., 1 Oct 2005, In: Soil Biology and Biochemistry. 37, 10, p. 1814-1821

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Decomposition ‘hotspots’ in a rewetted peatland: implications for water quality and carbon cycling

    Fenner, N., Williams, R., Toberman, H., Hughes, S., Reynolds, B. & Freeman, C., 1 Oct 2011, In: Hydrobiologia. 674, 1, p. 51-66

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Evaluation of algal bloom mitigation and nutrient removal in floating constructed wetlands with different macrophyte species

    Fenner, N., West, M., Gough, R. & Freeman, C., Nov 2017, In: Ecological Engineering. 108, Part B, p. 581-588

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Woody litter protects peat carbon stocks during drought

    Fenner, N. & Freeman, C., 16 Mar 2020, In: Nature Climate Change. 10, 4, p. 363-369

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Hydrological effects on the diversity of phenolic degrading bacteria in a peatland: implications for carbon cycling.

    Fenner, N., Freeman, C. & Reynolds, B., 1 Jul 2005, In: Soil Biology and Biochemistry. 37, 7, p. 1277-1287

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Peatland carbon efflux partitioning reveals that Sphagnum photosynthate contributes to the DOC pool

    Fenner, N., Ostle, N., Freeman, C., Sleep, D. & Reynolds, B., Feb 2004, In: Plant and Soil. 259, 1-2, p. 345-354

    Research output: Contribution to journalArticlepeer-review

  26. Published

    A novel approach to studying the effects of temperature on soil biogeochemistry using a thermal gradient bar

    Fenner, N., Dowrick, D. J., Lock, M. A., Rafarel, C. R. & Freeman, C., 1 Sept 2006, In: Soil Use and Management. 22, 3, p. 267-273

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Interactions between elevated CO2 and warming could amplify DOC exports from peatland catchments.

    Fenner, N., Freeman, C., Lock, M. A., Harmens, H., Reynolds, B. & Sparks, T., 29 Mar 2007, In: Environmental Science and Technology. 41, 9, p. 3146-3152

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Elevated CO2 effects on peatland plant community carbon dynamics and DOC production.

    Fenner, N., Ostle, N. J., McNamara, N., Sparks, T., Harmens, H., Reynolds, B. & Freeman, C., 1 Jun 2007, In: Ecosystems. 10, 4, p. 635-647

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Molecular weight spectra of dissolved organic carbon in a rewetted Welsh peatland and possible implications for water quality.

    Fenner, N., Freeman, C., Hughes, S. & Reynolds, B., 1 Jun 2001, In: Soil Use and Management. 17, 2, p. 106-112

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Inland Water Bodies in China: New Features Discovered in the Long-term Satellite Data

    Feng, S., Liu, S., Huang, Z., Jing, L., Zhao, M., Peng, X., Yan, W., Wu, Y., Lv, Y., Smith, A., McDonald, M., Patil, S., Sarkissian, A., Shi, Z., Xia, J. & Ogbodo, U. S., 17 Dec 2019, In: Proceedings of the National Academy of Sciences of the USA. 116, 51, p. 25491-25496

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Characterization and transcriptional analysis of two gene clusters for type IV secretion machinery in Wolbachia of Armadillidium vulgare.

    Felix, C., Pichon, S., Braquart-Varnier, C., Braig, H. R., Chen, L., Garrett, R. A., Martin, G. & Greve, P., 1 Jul 2008, In: Research in Microbiology. 159, 6, p. 481-485

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Klonirovanie gena vnekletochnoĭ RNKazy Bacillus circulans

    Fedorova, N. D., Shul'ga, A. A., Peredel'chuk, M. P., Kozharinova, L. V., Golyshin, P. N., Riabchenko, N. F. & Kirpichnikov, M. P., 1 Mar 1994, In: Molekuliarnaia biologiia. 28, 2, p. 468-71 4 p.

    Research output: Contribution to journalArticlepeer-review

  33. Published

    One-pot biocatalytic transformation of adipic acid to 6-aminocaproic acid and 1,6-hexamethylenediamine using carboxylic acid reductases and transaminases

    Fedorchuk, T. P., Khusnutdinova, A. N., Evdokimova, E., Flick, R., Di Leo, R., Stogios, P. J., Savchenko, A. & Yakunin, A., 15 Jan 2020, In: Journal of the American Chemical Society. 142, 2, p. 1038-1048 11 p.

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Site-directed mutagenesis and stability of the carboxylic acid reductase MAB4714 from Mycobacterium abscessus

    Fedorchuk, T. P., Khusnutdinova, A. N., Flick, R. & Yakunin, A., 10 Sept 2019, In: Journal of Biotechnology. 303, p. 72-79

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Use of composts in the remediation of heavy metal contaminated soil.

    Farrell, M. & Jones, D. L., 15 Mar 2010, In: Journal of Hazardous Materials. 175, 1-3, p. 575-582

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Rapid peptide metabolism: A major component of soil nitrogen cycling?

    Farrell, M., Hill, P. W., Wanniarachchi, S. D., Farrar, J., Bardgett, R. D. & Jones, D. L., 1 Sept 2011, In: Global Biogeochemical Cycles. 25, 3, p. 1-11

    Research output: Contribution to journalArticlepeer-review

  37. Published

    The effect of gibberellic acid on the response of leaf extension to low temperature.

    Farrell, A. D., Ougham, H. J. & Tomos, A. D., 1 Jul 2006, In: Plant Cell and Environment. 29, 7, p. 1329-1337

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Modification of fertility of soil materials for restoration of acid grassland habitat.

    Farrell, M., Healey, J. R., Godbold, D. L., Nason, M. A., Tandy, S. & Jones, D. L., 12 Mar 2010, In: Restoration Ecology. 19, 4, p. 509-519

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Food waste composting: Its use as a peat replacement.

    Farrell, M. & Jones, D. L., 1 Aug 2010, In: Waste Management. 30, 8-9, p. 1495-1501

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Microbial diversity and activity are increased by compost amendment of metal-contaminated soil.

    Farrell, M., Griffith, G. W., Hobbs, P. J., Perkins, W. T. & Jones, D. L., 1 Jan 2010, In: Fems Microbiology Ecology. 71, 1, p. 94-105

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Migration of heavy metals in soil as influenced by compost amendments.

    Farrell, M., Perkins, W. T., Hobbs, P. J., Griffith, G. W. & Jones, D. L., 1 Jan 2010, In: Environmental Pollution. 158, 1, p. 55-64

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Soil microbial organic nitrogen uptake is regulated by carbon availability

    Farrell, M., Prendergast-Miller, M., Jones, D. L., Hill, P. W. & Condron, L. M., 9 Jul 2014, In: Soil Biology and Biochemistry. 77, p. 261-267

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Environmental DNA monitoring of oncogenic viral shedding and genomic profiling of sea turtle fibropapillomatosis reveals unusual viral dynamics

    Farrell, J. A., Yetsko, K., Whitmore, L., Whilde, J., Eastman, C. B., Ramia, D. R., Thomas, R., Linser, P., Creer, S., Burkhalter, B., Schnitzler, C. & Duffy, D. J., 12 May 2021, In: Communications Biology. 4, 1, p. 565 1 p.

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Characterisation of fibropapillomatosis tumour growth profiles in green sea turtles (Chelonia mydas)

    Farrell, J., Rachel, T., Martindale, M. Q. & Duffy, D., 2018, Testudo, 8, 5.

    Research output: Contribution to specialist publicationArticle

  45. Published

    Oligopeptides Represent a Preferred Source of Organic N Uptake: a global phenomenon?

    Farrell, M., Hill, P., DeLuca, T., Roberts, P., Kielland, K., Dahlgren, R., Murphy, D. V., Hobbs, P. J., Bardgett, R. D. & Jones, D. L., Jan 2013, In: Ecosystems. 16, 1, p. 133-145

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Amino acid dynamics across a grassland altitudinal gradient

    Farrell, M., Macdonald, L. M., Hill, P. W., Wanniarachchi, S. D., Farrar, J., Bardgett, R. D. & Jones, D. L., 1 Sept 2014, In: Soil Biology and Biochemistry. 76, p. 179-182

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Heavy metal contamination of a mixed waste compost: metal speciation and fate.

    Farrell, M. & Jones, D. L., 1 Oct 2009, In: Bioresource Technology. 100, 19, p. 4423-4432

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Critical evaluation of municipal solid waste composting and potential compost markets.

    Farrell, M. & Jones, D. L., 1 Oct 2009, In: Bioresource Technology. 100, 19, p. 4301-4310

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Seasonal variation in soluble soil carbon and nitrogen across a grassland productivity gradient.

    Farrell, M., Hill, P. W., Farrar, J. F., Bardgett, R. D. & Jones, D. L., 1 Apr 2011, In: Soil Biology and Biochemistry. 43, 4, p. 835-844

    Research output: Contribution to journalArticlepeer-review

  50. Published

    How roots control the flux of carbon to the rhizosphere

    Farrar, J. F., Hawes, M., Jones, D. L. & Lindow, S., 1 Apr 2003, In: Ecology. 84, 4, p. 827-837

    Research output: Contribution to journalArticlepeer-review