Tracing the fate of wastewater viruses reveals catchment-scale virome diversity and connectivity

Adriaenssens, E. M., Farkas, K., McDonald, J. E., Jones, D. L., Allison, H. E. & McCarthy, A. J., 15 Medi 2021, Yn: Water Research. 203

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Viromic Analysis of Wastewater Input to a River Catchment Reveals a Diverse Assemblage of RNA Viruses

Adriaenssens, E. M., Farkas, K., Harrison, C., Jones, D. L., Allison, H. E. & McCarthy, A., 22 Mai 2018, Yn: mSystems. 3, 3, e00025-18.

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Comparison of virus concentration methods for the RT-qPCR-based recovery of murine hepatitis virus, a surrogate for SARS-CoV-2 from untreated wastewater

Ahmed, W., Bertsch, P., Bivins, A., Bibby, K., Farkas, K., Gathercole, A., Haramoto, E., Gyawali, P., Korajkic, A., McMinn, B., Mueller, J., Simpson, S., Smith, W., Symonds, E., Thomas, K., Verhagen, R. & Kitajima, M., 15 Hyd 2020, Yn: Science of the Total Environment. 739, 139960.

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Development and validation of a duplex RT-qPCR assay for norovirus quantification in wastewater samples

Alex-Sanders, N., Woodhall, N., Farkas, K., Scott, G., Jones, D. L. & Walker, D. I., 1 Tach 2023, Yn: Journal of Virological Methods. 321, 114804.

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Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa

Bernardo, P., Muhire, B., Francois, S., Deshoux, M., Hartnady, P., Farkas, K., Kraberger, S., Filloux, D., Fernandez, E., Galzi, S., Ferdinand, R., Granier, M., Marais, A., Blasco, P. M., Candresse, T., Escriu, F., Varsani, A., Harkins, G. W., Martin, D. P. & Roumagnac, P., 1 Meh 2016, Yn: Virology. 493, t. 142-153

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Wastewater-Based Epidemiology: Global Collaborative to Maximize Contributions in the Fight Against COVID-19

Bivins, A., North, D., Ahmad, A., Ahmed, W., Alm, E., Been, F., Bhattacharya, P., Bijlsma, L., Boehm, A. B., Brown, J., Buttiglieri, G., Calabro, V., Carducci, A., Castiglioni, S., Gurol, Z. C., Chakraborty, S., Costa, F., Curcio, S., de los Reyes, F. L. ,. I., Vela, J. D., Farkas, K., Fernandez-Casi, X., Gerba, C., Gerrity, D., Girones, R., Gonzalez, R., Haramoto, E., Harris, A., Holden, P. A., Islam, M. T., Jones, D. L., Kasprzyk-Hordern, B., Kitajima, M., Kotlarz, N., Kumar, M., Kuroda, K., La Rosa, G., Malpei, F., Mautus, M., McLellan, S. L., Medema, G., Meschke, J. S., Mueller, J., Newton, R. J., Nilsson, D., Noble, R. T., van Nuijs, A., Peccia, J., Perkins, T. A., Pickering, A. J., Rose, J., Sanchez, G., Smith, A., Stadler, L., Stauber, C., Thomas, K., van der Voorn, T., Wigginton, K., Zhu, K. & Bibby, K., 7 Gorff 2020, Yn: Environmental Science and Technology. 54, 13, t. 7754-7757

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City-wide wastewater genomic surveillance through the successive emergence of SARS-CoV-2 Alpha and Delta variants

Brunner, F. S., Brown, M. R., Bassano, I., Denise, H., Khalifa, M. S., Wade, M. J., van Aerle, R., Kevill, J. L., Jones, D. L., Farkas, K., Jeffries, A. R., Cairns, E., Wierzbicki, C. & Paterson, S., 1 Tach 2022, Yn: Water research. 226, 119306.

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The ancient evolutionary history of polyomaviruses

Buck, C. B., Van Doorslaer, K., Peretti, A., Geoghegan, E. M., Tisza, M. J., An, P., Katz, J. P., Pipas, J. M., McBride, A. A., Camus, A. C., McDermott, A. J., Dill, J. A., Delwart, E., Ng, T. F. F., Farkas, K., Austin, C., Kraberger, S., Davison, W., Pastrana, F. V. & Varsani, A., 19 Ebr 2016, Yn: PLoS Pathogens. 12, 4, e1005574.

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Prevalence and relative risk of rotavirus gastroenteritis in children under five years in Nigeria: A systematic review and meta-analysis

Digwo, D., Chidebelu, P., Ugwu, K., Adediji, A., Farkas, K. & Chigor, V., Chwef 2023, Yn: Pathogens and Global Health. 117, 1, t. 24-35 12 t., 2043223.

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Critical Evaluation of CrAssphage as a Molecular Marker for Human-Derived Wastewater Contamination in the Aquatic Environment

Farkas, K., Adriaenssens, E. M., Walker, D. I., McDonald, J., Malham, S. & Jones, D. L., 1 Meh 2019, Yn: Food and Environmental Virology. 11, 2, t. 113-119

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Harnessing the Power of Next-Generation Sequencing in Wastewater-Based Epidemiology and Global Disease Surveillance

Farkas, K., Williams, R. C., Hillary, L. S., Garcia-Delgado, A., Jameson, E., Kevill, J. L., Wade, M. J., Grimsley, J. M. S. & Jones, D. L., 30 Tach 2024, Yn: Food and Environmental Virology. 17, 1, 5.

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Concentration and Quantification of SARS-CoV-2 RNA in Wastewater Using Polyethylene Glycol-Based Concentration and qRT-PCR.(vol 4, 17, 2021)

Farkas, K., Hillary, L. S., Thorpe, J., Walker, D. I., Lowther, J. A., McDonald, J. E., Malham, S. K. & Jones, D. L., 12 Tach 2021, Yn: Methods and Protocols. 4, 4

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Two-Step Concentration of Complex Water Samples for the Detection of Viruses

Farkas, K., McDonald, J., Malham, S. & Jones, D. L., 10 Medi 2018, Yn: Methods and Protocols. 1, 3, 35.

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Comparative assessment of Nanotrap and polyethylene glycol-based virus concentration in wastewater samples

Farkas, K., Kevill, J. L., Williams, R. C., Pântea, I., Ridding, N., Lambert-Slosarska, K., Woodhall, N., Grimsley, J. M. S., Wade, M. J., Singer, A. C., Weightman, A. J., Cross, G. & Jones, D. L., 5 Maw 2024, (E-gyhoeddi cyn argraffu) Yn: FEMS microbes. 5, xtae007.

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Evaluation of Molecular Methods for the Detection and Quantification of Pathogen-Derived Nucleic Acids in Sediment

Farkas, K., Hassard, F., McDonald, J., Malham, S. & Jones, D., 24 Ion 2017, Yn: Frontiers in Microbiology. 6, t. 1-12 53.

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Rapid Assessment of SARS-CoV-2 Variant-Associated Mutations in Wastewater Using Real-Time RT-PCR

Farkas, K., Pellett, C., Williams, R., Alex-Sanders, N., Bassano, I., Brown, M. R., Denise, H., Grimsley, J. M. S., Kevill, J. L., Khalifa, M. S., Pântea, I., Story, R., Wade, M. J., Woodhall, N. & Jones, D. L., 14 Chwef 2023, Yn: Microbiology Spectrum. 11, 1, e0317722.

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Seasonal and diurnal surveillance of treated and untreated wastewater for human enteric viruses

Farkas, K., Marshall, M., Cooper, D., McDonald, J. E., Malham, S. K., Peters, D. E., Maloney, J. D. & Jones, D. L., Tach 2018, Yn: Environmental Science and Pollution Research. 25, 33, t. 33391-33401

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Adsorption of Rotavirus, MS2 Bacteriophage and Surface-Modified Silica Nanoparticles to Hydrophobic Matter

Farkas, K., Pang, L. & Varsani, A., 1 Medi 2015, Yn: Food and Environmental Virology. 7, 3, t. 261-268

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Investigating awareness, fear and control associated with norovirus and other pathogens and pollutants using best–worst scaling

Farkas, K., Green, E., Rigby, D., Cross, P., Tyrrel, S., Malham, S. & Jones, D. L., 27 Mai 2021, Yn: Scientific Reports. 11, 1, 11 t., 11194.

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Evaluation of Two Triplex One-Step qRT-PCR Assays for the Quantification of Human Enteric Viruses in Environmental Samples

Farkas, K., Peters, D. E., McDonald, J., de Rougemont, A., Malham, S. & Jones, D., Medi 2017, Yn: Food and Environmental Virology. 9, 3, t. 342-349

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Comparative Assessment of Filtration- and Precipitation-Based Methods for the Concentration of SARS-CoV-2 and Other Viruses from Wastewater

Farkas, K., Pellett, C., Alex-Sanders, N., Bridgman, M. T. P., Corbishley, A., Grimsley, J. M. S., Kasprzyk-Hordern, B., Kevill, J. L., Pantea, I., Richardson-O'Neill, I. S., Lambert-Slosarska, K., Woodhall, N. & Jones, D. L., 31 Awst 2022, Yn: Microbiology Spectrum. 10, 4, 16 t., spectrum.01102-22.

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Viral indicators for tracking domestic wastewater contamination in the aquatic environment

Farkas, K., Walker, D., Adriaenssens, E., McDonald, J., Hillary, L., Malham, S. & Jones, D. L., 15 Awst 2020, Yn: Water Research. 181, 115926.

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Emerging technologies for the rapid detection of enteric viruses in the aquatic environment

Farkas, K., Mannion, F., Hillary, L., Malham, S. & Walker, D., Awst 2020, Yn: Current Opinion in Environmental Science & Health. 16, t. 1-6

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Concentration and quantification of SARS-CoV-2 RNA in wastewater using polyethylene glycol-based concentration and qRT-PCR

Farkas, K., Hillary, L., Thorpe, J., Walker, D., Lowther, J. A., McDonald, J., Malham, S. & Jones, D. L., 23 Chwef 2021, Yn: Methods and Protocols. 4, 1, 10 t., 17.

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Size exclusion-based purification and PCR-based quantitation of MS2 bacteriophage particles for environmental applications

Farkas, K., Varsani, A., Marjoshi, D., Easingwood, R., McGill, E. & Pang, L., 1 Maw 2015, Yn: Journal of Virological Methods. t. 135-138

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Diurnal changes in pathogenic and indicator virus concentrations in wastewater

Farkas, K., Pântea, I., Woodhall, N., Williams, D., Lambert-Slosarska, K., Williams, R. C., Grimsley, J. M. S., Singer, A. C. & Jones, D. L., Rhag 2023, Yn: Environmental Science and Pollution Research. 30, 59, t. 123785-123795 11 t.

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Wastewater-based monitoring of SARS-CoV-2 at UK airports and its potential role in international public health surveillance

Farkas, K., Williams, R., Alex-Sanders, N., Grimsley, J. M. S., Pântea, I., Wade, M. J., Woodhall, N. & Jones, D. L., 19 Ion 2023, Yn: PLOS global public health. 3, 1, e0001346.

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Wastewater and public health: the potential of wastewater surveillance for monitoring COVID-19

Farkas, K., Hillary, L., Malham, S., McDonald, J. & Jones, D. L., Hyd 2020, Yn: Current Opinion in Environmental Science & Health. 17, t. 14-20 7 t.

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A Gel Filtration-Based Method for the Purification of Infectious Rotavirus Particles for Environmental Research Applications

Farkas, K., Pang, L., Lin, S., Williamson, W., Easingwood, R., Fredericks, R., Jaffer, M. A. & Varsani, A., 1 Rhag 2013, Yn: Food and Environmental Virology. 5, 4, t. 231-235

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Assessment of wastewater derived pollution using viral monitoring in two estuaries

Farkas, K., Mannion, F., Sorby, R., Winterbourn, B., Allender, S., Gregory, C. G. M., Holding, P., Thorpe, J. M., Malham, S. K. & Le Vay, L., 1 Maw 2024, Yn: Marine pollution bulletin. 200, 116081.

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Site Specific Relationships between COVID-19 Cases and SARS-CoV-2 Viral Load in Wastewater Treatment Plant Influent

Fitzgerald, S. F., Rossi, G., Low, A. S., McAteer, S. P., O'Keefe, B., Findlay, D., Cameron, G. J., Pollard, P., Singleton, P. T. R., Ponton, G., Singer, A. C., Farkas, K., Jones, D. L., Graham, D. W., Quintela-Baluja, M., Tait-Burkard, C., Gally, D. L., Kao, R. & Corbishley, A., 16 Tach 2021, Yn: Environmental Science and Technology. 55, 22, t. 15276-15286 11 t.

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Abundance and Distribution of Enteric Bacteria and Viruses in Coastal and Estuarine Sediments—a Review

Hassard, F., Gwyther, C. L., Farkas, K., Andrews, A., Jones, V., Cox, B., Brett, H., Jones, D., McDonald, J. & Malham, S., 1 Tach 2016, Yn: Frontiers in Microbiology.

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Monitoring SARS-CoV-2 in municipal wastewater to evaluate the success of lockdown measures for controlling COVID-19 in the UK

Hillary, L. S., Farkas, K., Maher, K. H., Lucaci, A., Thorpe, J., Distaso, M. A., Gaze, W. H., Paterson, S., Burke, T., Connor, T. R., McDonald, J. E., Malham, S. K. & Jones, D. L., 15 Gorff 2021, Yn: Water Research. 200, t. 117214 1 t.

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Shedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19

Jones, D. L., Baluja, M. Q., Graham, D. W., Corbishley, A., McDonald, J. E., Malham, S. K., Hillary, L. S., Connor, T. R., Gaze, W. H., Moura, I. B., Wilcox, M. H. & Farkas, K., 20 Rhag 2020, Yn: Science of the Total Environment. 749, 141364.

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Poor air passenger knowledge of COVID-19 symptoms and behaviour undermines strategies aimed at preventing the import of SARS-CoV-2 into the UK

Jones, D. L., Rhymes, J., Green, E., Rimmer, C., Kevill, J., Malham, S., Weightman, A. & Farkas, K., 1 Maw 2023, Yn: Scientific Reports. 13, 1, 3494.

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Suitability of aircraft wastewater for pathogen detection and public health surveillance

Jones, D. L., Rhymes, J., Wade, M. J., Kevill, J., Malham, S., Grimsley, J. M. S., Rimmer, C., Weightman, A. & Farkas, K., 15 Ion 2023, Yn: Science of the Total Environment. 856, Pt 2, t. 159162 159162.

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Use of wastewater from passenger ships to assess the movement of COVID-19 and other pathogenic viruses across maritime international boundaries

Jones, D. L., Bridgman, M., Pellett, C., Weightman, A. J., Kille, P., García Delgado, Á., Cross, G., Cobley, S., Howard-Jones, H., Chadwick, D. R. & Farkas, K., 15 Gorff 2024, Yn: Frontiers in Public Health. 12, t. 1377996

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Critical Evaluation of Different Passive Sampler Materials and Approaches for the Recovery of SARS-CoV-2, Faecal-Indicator Viruses and Bacteria from Wastewater

Jones, D. L., Grimsley, J. M. S., Kevill, J. L., Williams, R., Pellett, C., Lambert-Slosarska, K., Singer, A. C., Williams, G. B., Bargiela, R., Brown, R. W., Agency, U. & Farkas, K., 6 Tach 2022, Yn: Water. 14, 21, 3568.

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Genome sequences of Beet curly top Iran virus, Oat dwarf virus, Turnip curly top virus, and wheat dwarf virus identified in leafhoppers

Kamali, M., Heydarnejad, J., Pouramini, N., Masumi, H., Farkas, K., Kraberger, S. & Varsani, A., 23 Chwef 2017, Yn: Genome Announcements. 5, 8, e01674-16.

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Multi-biomarker approach for estimating population size in a national-scale wastewater-based epidemiology study

Kasprzyk-Hordern, B., Jagadeesan, K., Sims, N., Farkas, K., Proctor, K., Bagnall, J., Robertson, M., Jones, D. L. & Wade, M. J., 1 Ion 2025, Yn: Water research. 268, Pt A, t. 122527

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Wastewater-based epidemiology for comprehensive community health diagnostics in a national surveillance study: Mining biochemical markers in wastewater

Kasprzyk-Hordern, B., Sims, N., Farkas, K., Jagadeesan, K., Proctor, K., Wade, M. J. & Jones, D. L., 15 Mai 2023, Yn: Journal of Hazardous Materials. 450, 1 t., 130989.

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A comparison of precipitation and filtration-based SARS-CoV-2 recovery methods and the influence of temperature, turbidity, and surfactant load in urban wastewater

Kevill, J. L., Pellett, C., Farkas, K., Brown, M. R., Bassano, I., Denise, H., McDonald, J. E., Malham, S. K., Porter, J., Warren, J., Evens, N. P., Paterson, S., Singer, A. C. & Jones, D. L., 20 Chwef 2022, Yn: Science of the Total Environment. 808, 151916.

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Comparative impact of sunlight and salinity on human pathogenic virus survival in river, estuarine, and marine water microcosms

Kevill, J., Herridge, K., Li, X., Farkas, K., Malham, S., Robins, P. & Jones, D. L., 15 Meh 2025, Yn: Water Research. 278, 123411, 123411.

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Evaluation of Three Viral Capsid Integrity qPCR Methods for Wastewater-Based Viral Surveillance

Kevill, J., Farkas, K., Herridge, K., Malham, S. & Jones, D. L., 6 Ion 2025, (E-gyhoeddi cyn argraffu) Yn: Food and Environmental Virology. 17, 12, 12.

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Use of Capsid Integrity-qPCR for Detecting Viral Capsid Integrity in Wastewater

Kevill, J. L., Farkas, K., Ridding, N., Woodhall, N., Malham, S. K. & Jones, D. L., 26 Rhag 2023, Yn: Viruses. 16, 1

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Microcosm experiment investigating climate-induced thermal effects on human virus viability in seawater: qPCR vs capsid integrity for enhanced risk management

Kevill, J., Li, X., Garcia-Delgado, A., Herridge, K., Farkas, K., Gaze, W. H., Robins, P., Malham, S. & Jones, D. L., 1 Tach 2024, Yn: Marine Pollution Bulletin. 208, 117006.

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Assessment of two types of passive sampler for the efficient recovery of SARS-CoV-2 and other viruses from wastewater

Kevill, J. L., Lambert-Slosarska, K., Pellett, C., Woodhall, N., Richardson-O'Neill, I., Pantea, I., Alex-Sanders, N., Farkas, K. & Jones, D. L., 10 Medi 2022, Yn: Science of the Total Environment. 838, 4, 156580.

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