School of Environmental & Natural Sciences

  1. Published

    Competition between plant and bacterial cells at the microscale regulates the dynamics of nitrogen acquisition in wheat (Triticum aestivum)

    Jones, D. L., Clode, P. L., Kilburn, M. R., Stockdale, E. A. & Murphy, D. V., 1 Nov 2013, In: New Phytologist. 200, 3, p. 796-807

    Research output: Contribution to journalArticlepeer-review

  2. Published

    Organic acid behavior in soils: misconceptions and knowledge gaps.

    Jones, D. L., Dennis, P. G., Owen, A. G. & Van Hees, P. A., 1 Jan 2003, In: Plant and Soil. 248, 1-2, p. 31-41

    Research output: Contribution to journalArticlepeer-review

  3. Published

    Carbon flow in the rhizosphere: carbon trading at the soil-root interface.

    Jones, D. L., Nguyen, C. & Finlay, R. D., 1 Aug 2009, In: Plant and Soil. 321, 1-2, p. 5-33

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Soil amino acid turnover dominates the nitrogen flux in permafrost-dominated taiga forest soils.

    Jones, D. L. & Kielland, K., 1 Feb 2002, In: Soil Biology and Biochemistry. 34, 2, p. 209-219

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Biochar mediated alterations in herbicide breakdown and leaching in soil

    Jones, D. L., Edwards-Jones, G. & Murphy, D. V., 1 Apr 2011, In: Soil Biology and Biochemistry. 43, 4, p. 804-813

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Short-term biochar-induced increase in soil CO2 release is both biotically and abiotically mediated

    Jones, D. L., Murphy, D. V., Khalid, M., Ahmad, W., Edwards-Jones, G. & DeLuca, T. H., 1 Aug 2011, In: Soil Biology and Biochemistry. 43, 8, p. 1723-1731

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Biochar-mediated changes in soil quality and plant growth in a three year field trial

    Jones, D. L., Rousk, J., Edwards-Jones, G., DeLuca, T. H. & Murphy, D. V., Feb 2012, In: Soil Biology and Biochemistry. 45, p. 113-124

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Synthesis and characterization of templated pentaborate(1-) salts: X-ray structure of [(2-HOCH2CH2)C4H7NMeH][B5O6(OH)4]·0.3H2O

    Jones, C., Beckett, M., Coles, S. J., Davies, R. & Horton, P. N., 1 Aug 2016, In: Phosphorus, Sulfur and Silicon and the Related Elements. 191, 4, p. 628-630

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Escherichia coli O157: comparing awareness of rural residents and visitors in livestock farming areas

    Jones, C. D., Hunter, C., Williams, A. P., Strachan, N. J. & Cross, P., 7 Jan 2011, In: Epidemiology and Infection. 139, 10, p. 1522-1530

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Beyond Taxonomic Identification: Integration of Ecological Responses to a Soil Bacterial 16S rRNA Gene Database

    Jones, B., Goodall, T., George, P. B. L., Gweon, H. S., Puissant, J., Read, D. S., Emmett, B., Robinson, D. A., Jones, D. L. & Griffiths, R. I., 19 Jul 2021, In: Frontiers in Microbiology. 12, 682886.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Influence of electrode geometry on the redox switching characteristics of conducting polymers

    Jones, B. J. & Kalaji, M., 10 Aug 2005, In: Electrochimica Acta. 50, 22, p. 4505-4512

    Research output: Contribution to journalArticlepeer-review

  12. Published

    The conservation of variation in geographically peripheral populations: Lloydia serotina (Liliaceae) in Britain.

    Jones, B., Gliddon, C. J. & Good, J. E., 1 Oct 2001, In: Biological Conservation. 101, 2, p. 147-156

    Research output: Contribution to journalArticlepeer-review

  13. Published

    Estimating the prevalence of food risk increasing behaviours in UK kitchens

    Jones, A. K., Cross, P., Burton, M., Millman, C., O’Brien, S. J. & Rigby, D., 28 Jun 2017, In: PLoS ONE. 12, 6, p. e0175816

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Restaurant Cooking Trends and Increased Risk for Campylobacter Infection

    ENIGMA Consortium, 1 Jul 2016, In: Emerging Infectious Diseases. 22, 7

    Research output: Contribution to journalArticlepeer-review

  15. Published

    A re-investigation of the mycolic acids of Mycobacterium avium

    Jones, A., Lee, O. Y-C., Minnikin, D. E., Baird, M. S. & Al Dulayymi, J. R., Aug 2020, In: Chemistry and Physics of Lipids. 230, 104928.

    Research output: Contribution to journalArticlepeer-review

  16. Published

    New synthetic lipid antigens for rapid serological diagnosis of tuberculosis

    Jones, A., Pitts, M., Al-Dulayymi, J., Gibbons, J., Ramsay, A., Goletti, D., Gwenin, C. & Baird, M., 14 Aug 2017, In: PLoS ONE. 12, 8, e0181414.

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Elevated serum antibody responses to synthetic mycobacterial lipid antigens among UK farmers: an indication of exposure to environmental mycobacteria?

    Jones, A., Davies, C., Al-Dulayymi, J., Gwenin, C., Gibbons, J., Williams, P. & Baird, M., 1 Feb 2021, In: RSC Medicinal Chemistry. 12, 2, p. 213-221 9 p.

    Research output: Contribution to journalArticlepeer-review

  18. Published

    The carbon footprint of lamb: Sources of variation and opportunities for mitigation

    Jones, A. K., Jones, D. L. & Cross, P., 1 Jan 2014, In: Agricultural Systems. 123, p. 97-107

    Research output: Contribution to journalArticlepeer-review

  19. Published

    The carbon footprint of UK sheep production: current knowledge and opportunities for reduction in temperate zones

    Jones, A. K., Jones, D. L. & Cross, P., Apr 2014, In: Journal of Agricultural Science. 152, 2, p. 288-308

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Informing decision making in agricultural greenhouse gas mitigation policy: A Best-Worst Scaling survey of expert and farmer opinion in the sheep industry

    Jones, A. K., Jones, D., Edwards-Jones, G. & Cross, P., May 2013, In: Environmental Science and Policy. 29, p. 46-56

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Developing farm-specific marginal abatement cost curves: Cost-effective greenhouse gas mitigation opportunities in sheep farming systems

    Jones, A. K., Jones, D. L. & Cross, P., 12 Sept 2015, In: Land Use Policy. 49, p. 394-403

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. (ed.) & Schippers, A. (ed.), 19 Jan 2017, Frontiers Media. 155 p.

    Research output: Book/ReportBook

  23. Published

    Sulfobacillus benefaciens sp nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations.

    Johnson, D. B., Joulian, C., d'Hughes, P. & Hallberg, K. B., 1 Nov 2008, In: Extremophiles. 12, 6, p. 789-798

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Genus II. Leptospirillum

    Johnson, D. B., Boone, D. R. (ed.) & Castenholtz, R. W. (ed.), 1 Jan 2001, Bergey's Manual of Systematic Bacteriology: Archaea and the Deeply Branching and Phototrophic Bacteria v. 1. 2001 ed. Springer, p. 453-457

    Research output: Chapter in Book/Report/Conference proceedingChapter

  25. Published

    Physiology and ecology of acidophilic microorganisms.

    Johnson, D. B., Gerday, C. (ed.) & Glansdorff, N. (ed.), 1 Jan 2007, Physiology and Biochemistry of Extremophiles. 2007 ed. American Society for Microbiology, p. 257-270

    Research output: Chapter in Book/Report/Conference proceedingChapter

  26. Published

    Dissimilatory reduction of sulfate in extremely acidic environments is carried out by novel sulfidogenic bacteria in syntrophic consortia.

    Johnson, D. B., Rowe, O. F., Hallberg, K. B., Querellou, J. (ed.) & Lamy, C. (ed.), 1 Jan 2006, p. 36.

    Research output: Contribution to conferencePaper

  27. Published

    Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis

    Johnson, D. B., Okibe, N. & Hallberg, K. B., 1 Mar 2005, In: Journal of Microbiological Methods. 60, 3, p. 299-313

    Research output: Contribution to journalArticlepeer-review

  28. Published

    A New Direction for Biomining: Extraction of Metals by Reductive Dissolution of Oxidized Ores

    Johnson, D. B., Grail, B. M. & Hallberg, K. B., 30 Jan 2013, In: Minerals. 3, 1, p. 49-58

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Survival of acidophilic bacteria under conditions of substrate depletion that occur during culture storage.

    Johnson, D. B., Bruhn, D. F., Roberto, F. F., Tsezos, M. (ed.), Hatzikioseyian, A. (ed.) & Remoudaki, E. (ed.), 1 Jan 2004, p. 1195-1203.

    Research output: Contribution to conferencePaper

  30. Published

    Carbon, Iron and Sulfur Metabolism in Acidophilic Micro-Organisms.

    Johnson, D. B. & Hallberg, K. B., 1 Jan 2009, In: Advances in Microbial Physiology. 54, p. 201-255

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Importance of microbial ecology in the development of new mineral technologies.

    Johnson, D. B., 1 Feb 2001, In: Hydrometallurgy. 59, 2-3, p. 147-157

    Research output: Contribution to journalArticlepeer-review

  32. Published
  33. Published
  34. Published

    Biohydrometallurgy and the environment: Intimate and important interplay

    Johnson, D. B., 1 Sept 2006, In: Hydrometallurgy. 83, 1-4, p. 153-166

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Investigation of the microbial diversity of an extremely acidic, metal-rich water body (Lake Robule, Bor, Serbia)

    Johnson, D. B., Stanković, S., Morić, I., Pavić, A., Vasiljević, B., Johnson, B. D. & Cvetković, V., 30 Jan 2014, In: Journal of the Serbian Chemical Society. 79, 6, p. 729-741

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Biomining: an Established and Dynamic Biotechnology

    Johnson, D. B., 1 Dec 2012, In: Microbiology Indonesia. 6, 4, p. 189-193

    Research output: Contribution to journalArticlepeer-review

  37. Published

    The microbiology of acidic mine waters.

    Johnson, D. B. & Hallberg, K., 1 Sept 2003, In: Research in Microbiology. 154, 7, p. 466-473

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Biohydrometallurgy and the environment: intimate and important associations.

    Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, p. liii-lxvii.

    Research output: Contribution to conferencePaper

  39. Published
  40. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceedingChapter

  41. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters.

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 1 Jan 2009, p. 693-696.

    Research output: Contribution to conferencePaper

  42. Published

    Isolation and characterization of Acidicaldus organivorus, gen. nov., sp nov.: a novel sulfur-oxidizing, ferric iron-reducing thermo-acidophilic heterotrophic Proteobacterium.

    Johnson, D. B., Stallwood, B., Kimura, S. & Hallberg, K. B., 1 Apr 2006, In: Archives of Microbiology. 185, 3, p. 212-221

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams

    Johnson, D. B., Sen, A. M., Kimura, S., Rowe, O. F. & Hallberg, K. B., 1 Mar 2006, In: Mineral Processing and Extractive Metallurgy. 115, 1, p. 19-24

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journalArticlepeer-review

  45. Published
  46. Published

    Development of an integrated microbiological approach for remediation of acid mine drainage and recovery of heavy metals.

    Johnson, D. B., Rowe, O., Kimura, S., Hallberg, K. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 151-157.

    Research output: Contribution to conferencePaper

  47. Published

    Isolation and phylogenetic characterisation of acidophilic microorganisms indigenous to acidic drainage wartes at an abandoned Norwegian copper mine

    Johnson, D. B., Rolfe, S., Hallberg, K. & Iversen, E., 1 Oct 2001, In: Environmental Microbiology. 3, 10, p. 630-637

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Redox transformations of iron at extremely low pH: fundamental and applied aspects

    Johnson, D. B., Kanao, T. & Hedrich, S., 16 Mar 2012, In: Frontiers in Microbiology. 3, p. 96

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles

    Johnson, D. B., 1 Oct 2012, In: Hydrometallurgy. 127-128, p. 172-177

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journalArticlepeer-review