College of Science & Engineering

  1. Published

    Biophysical drivers of coral trophic depth zonation

    Williams, G., Sandin, S. A., Zgliczynski , B. J., Fox, M., Gove, J. M., Rogers, J. S., Furby, K., Hartmann, A., Caldwell, Z. R., Price, N. & Smith, J. E., Apr 2018, In: Marine Biology. 165, 60.

    Research output: Contribution to journalArticlepeer-review

  2. Published

    Biooxidation of pyrite by defined mixed cultures of moderately thermophilic acidophiles in pH-controlled bioreactors: Significance of microbial interactions.

    Okibe, N. & Johnson, D. B., 5 Sept 2004, In: Biotechnology and Bioengineering. 87, 5, p. 574-583

    Research output: Contribution to journalArticlepeer-review

  3. Published

    Biomining: an Established and Dynamic Biotechnology

    Johnson, D. B., 1 Dec 2012, In: Microbiology Indonesia. 6, 4, p. 189-193

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Biomining goes underground

    Johnson, D. B., 27 Feb 2015, In: Nature Geoscience. 8, p. 165-166

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Biomining - biotechnologies for extracting and recovering metals from ores and waste materials

    Johnson, D. B., 6 May 2014, In: Current Opinion in Biotechnology. 30, p. 24-31

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Biomining

    Rawlings, D. E. (Editor) & Johnson, D. B. (Editor), 1 Jan 2006, 2006 ed. Springer Verlag.

    Research output: Book/ReportBook

  8. Published

    Biomimetic model studies towards ptilomycalin A

    Murphy, P. J., Williams, H. L., Hibbs, D. E., Hursthouse, M. B. & Malik, K. M. A., 10 Jun 1996, In: Tetrahedron. 52, 24, p. 8315-8332 18 p.

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Biomediation of submarine sediment gravity flow dynamics

    Craig, M., Baas, J. H., Amos, K. J., Strachan, L. J., Manning, A. J., Paterson, D. M., Hope, J. A., Nodder, S. D. & Baker, M. L., Jan 2020, In: Geology. 48, 1, p. 72-76

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Biomass, composition and activity of organism assemblages along a salinity gradient in sea ice subjected to river discharge in the Baltic Sea.

    Kaartokallio, H., Kuosa, H., Thomas, D. N., Granskog, M. A. & Kivi, K., 1 Jan 2007, In: Polar Biology. 30, 2, p. 183-197

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Biology of the kingsoldier bream (Argyrops spinifer, Forsskal 1775; Sparidae), from the Arabian Sea, Oman.

    Al Mamry, J. M., McCarthy, I. D., Richardson, C. A. & Ben Meriem, S., 1 Oct 2009, In: Journal of Applied Ichthyology. 25, 5, p. 559-564

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Biology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments

    Golyshina, O., Kublanov, I. V., Hai, T., Korzhenkov, A. A., Lunsdorf, H., Nechitaylo, T. Y., Toshchakov, S. V. & Golyshin, P., Dec 2016, In: Scientific Reports. 6, 39034.

    Research output: Contribution to journalArticlepeer-review

  13. Published

    Biological–physical interactions are fundamental to understanding and managing coastal dynamics

    Solan, M., Spencer, T., Paterson, D. M., Unsworth, C., Christie, E., Blight, A., Brown, J., Brooks, H., Lichtman, I., Wei, X., Li, X., Thorne, P. D., Leyland, J., Godbold, J., Thompson, C., Williams, M., Plater, A., Moller, I. & Amoudry, L., 12 Jul 2023, In: Royal Society Open Science. 10, 7, 6 p., 230155.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Biologically-induced precipitation of aluminium in synthetic acid mine water

    Falagan Rodriguez, C., Johnson, D. B., Sanchez-Espana, J. & Yusta, I., Jun 2016, Biohydromet 2016 Proceedings.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  15. Published

    Biologically-induced precipitation of aluminium in synthetic acid mine water

    Falagan Rodriguez, C., Yusta, I. & Johnson, B., 15 May 2017, In: Minerals Engineering. 106, p. 79-85

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Biologically inspired herding of animal groups by robots

    King, A. J., Portugal, S. J., Strombom, D., Mann, R. P., Carrillo, J. A., Kalise, D., Croon, G. D., Barnett, H., Scerri, P., Gross, R., Chadwick, D. & Papadopoulou, M., 1 Feb 2023, In: Methods in Ecology and Evolution. 14, 2, p. 478-486 9 p.

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Biologically important artificial light at night on the seafloor

    Davies, T. W., McKee, D., Fishwick, J., Tidau, S. & Smyth, T., 27 Jul 2020, In: Scientific Reports. 10, 1, 12545.

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Biologically driven DOC release from peatlands during recovery from acidification

    Kang, H., Kwon, M. J., Kim, S., Lee, S., Jones, T. G., Johncock, A. C., Haraguchi , A. & Freeman, C., 18 Sept 2018, In: Nature Communications. 9, 3807.

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Biologically active cyclopropanes and cyclopropenes

    Salaun, J. & Baird, M., 1995, In: Current Medicinal Chemistry. 2, p. 511-542

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Biological versus abiotic oxidation of iron in acid mine drainage waters: an important role for moderately acidophilic, iron-oxidising bacteria.

    Dennison, F., Johnson, D. B., Sen, A. M., Hallberg, K. B., Ciminelli, V. S. (Editor) & Garcia Jr, O. (Editor), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 493-501

    Research output: Chapter in Book/Report/Conference proceedingChapter

  21. Published

    Biological treatment of acid inorganic wastewaters.

    Hallberg, K. B. & Johnson, D. B., 1 Jan 2002.

    Research output: Contribution to conferencePaper

  22. Published

    Biological roles of translin and translin-associated factor-X: RNA metabolism comes to the fore.

    Mcfarlane, R. J., Jaendling, A. & McFarlane, R. J., 15 Jul 2010, In: Biochemical Journal. 429, 2, p. 225-234

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Biological removal of sulfurous compounds and metals from inorganic wastewaters

    Johnson, B. & Santos, A. L., Oct 2020, Environmental Technologies to Treat Sulfur Pollution: Principles and Engineering. Lens, P. N. L. (ed.). 2nd ed. IWA Publishing, p. 215-246

    Research output: Chapter in Book/Report/Conference proceedingChapterpeer-review

  24. Published

    Biological manganese removal from acid mine drainage in constructed wetlands and prototype bioreactors.

    Hallberg, K. B. & Johnson, D. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 115-124

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Biological knowledge shortfalls impede conservation efforts in poorly studied taxa—A case study of Laboulbeniomycetes

    Haelewaters, D., Matthews, T. J., Wayman, J. P., Cazabonne, J., Heyman, F., Quandt, C. A. & Martin, T. E., Jan 2024, In: Journal of Biogeography. 51, 1, p. 29-39 11 p.

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Biological data from a Data Deficient shark: the Arabian smoothhound Mustelus mosis (Carcharhinformes: Triakidae)

    Moore, A., Henderson, A., Farrell, E. & Weekes, L., 1 Jun 2016, In: Journal of Fish Biology. 88, p. 2303-2307

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Biological control of pCO2 at station L4 in the Western English Channel over 3 years.

    Litt, E. J., Hardman-Mountford, N. J., Blackford, J. C., Mitchelson-Jacob, E. G., Goodman, A., Moore, G. F., Cummings, D. G. & Butenschon, M., 1 May 2010, In: Journal of Plankton Research. 32, 5, p. 621-629

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Biological characteristics of praziquantel-resistant and -susceptible isolates of Schistosoma mansoni.

    Liang, Y. S., Coles, G. C., Dai, J. R., Zhu, Y. C. & Doenhoff, M. J., 1 Oct 2001, In: Annals of Tropical Medicine and Parasitology. 95, 7, p. 715-723

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Biological and climate controls on North Atlantic marine carbon dynamics over the last millennium: Insights from an absolutely-dated shell based record from the North Icelandic Shelf

    Richardson, C., Reynolds, D., Scourse, J., Butler, P., Wanamaker, A. & Hall, I. R., Dec 2017, In: Global Biogeochemical Cycles. 31, 12, p. 1718-1735

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Biological Sampling, Processing and Data Analysis

    Mackie, A. S., Rees, E. I., Darbyshire, T., James, J. W. (Editor), Rees, E. I., Philpott, S. (Editor), Mortimer, K. (Editor), Jenkins, G. O. (Editor) & Morando, A. (Editor), 1 Jan 2006, The Outer Bristol Channel Marine Habitat Study. BIOMOR 4. 2006 ed. Unknown, p. 34-49

    Research output: Chapter in Book/Report/Conference proceedingChapter

  31. Published

    Biological Cell Discrimination Based on Their High Frequency Dielectropheretic Signatures at UHF Frequencies

    Hjeij, F., Dalamy, C., Bassette, B., Begaud, G., Bessaudou, A., Blondy, P., Jaubertau, M. O., Lalloue, F., Kaynak, C. B., Kaynak, M., Gamal, W., Palego, C. & Pothier, A., 2017, 2017 IEEE MTT-S International Microwave Symposium (IMS). Institution of Electrical Engineers (IEE)

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  32. Published

    Bioleaching of pyrite by defined mixed populations of moderately thermophilic acidophiles in pH-controlled bioreactors.

    Okibe, N., Johnson, D. B., Tsezos, M. (Editor), Hatzikioseyian, A. (Editor) & Remoudaki, E. (Editor), 1 Jan 2004, p. 165-173.

    Research output: Contribution to conferencePaper

  33. Published

    Bioleaching of pyrite by defined mixed cultures of moderately thermophilic acidophiles.

    Okibe, N., Johnson, D. B., Ciminelli, V. S. (Editor) & Garcia Jr, O. (Editor), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 443-451

    Research output: Chapter in Book/Report/Conference proceedingChapter

  34. Published

    Bioleaching of pyrite at low pH and low redox potentials by novel mesophilic Gram-positive bacteria.

    Yahya, A. & Johnson, D. B., 1 Feb 2002, In: Hydrometallurgy. 63, 2, p. 181-188

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Bioleaching of arsenic-rich cobalt mineral resources, and evidence for concurrent biomineralisation of scorodite during oxidative bio-processing of skutterudite

    Johnson, D. B., Dybowska, A., Schofield, P., Herrington, R., Smith, S. & Santos, A. L., 1 Aug 2020, In: Hydrometallurgy. 195, 105395.

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Bioleaching of Transition Metals From Limonitic Laterite Deposits and Reassessment of the Multiple Roles of Sulfur-Oxidizing Acidophiles in the Process

    Johnson, D. B., Smith, S. & Santos, A. L., 26 Jul 2021, In: Frontiers in Microbiology. 12, 703177.

    Research output: Contribution to journalArticlepeer-review

  37. Published

    Biohydrometallurgy and the environment: intimate and important associations.

    Johnson, D. B., Harrison, S. T. (Editor), Rawlings, D. E. (Editor) & Petersen, J. (Editor), 1 Jan 2005, p. liii-lxvii.

    Research output: Contribution to conferencePaper

  38. Published

    Biohydrometallurgy and the environment: Intimate and important interplay

    Johnson, D. B., 1 Sept 2006, In: Hydrometallurgy. 83, 1-4, p. 153-166

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Biogeography of the Indo-Australian Archipelago

    De Bruyn, M., Carvalho, G. R., Lohman, D. J., de Bruyn, M., Page, T., von Rintelen, K., Hall, R., Ng, P. K., Shih, H. T. & von Rintelen, T., 1 Dec 2011, In: Annual Review of Ecology, Evolution, and Systematics. 42, p. 205-226

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Biogeochemistry of sea ice in a changing climate.

    Thomas, D. N., 1 Jan 2005.

    Research output: Contribution to conferencePaper

  42. Published

    Biogeochemistry of sea ice at the limits of detection- what are we missing?

    Thomas, D. N., 1 Jan 2007.

    Research output: Contribution to conferencePaper

  43. Published

    Biogeochemistry of sea ice

    Thomas, D. N., Papadimitriou, S. & Dieckmann, G. S. (Editor), 1 Jan 2003, Sea Ice: An Introduction to its Physics, Chemistry, Biology and Geology. 2003 ed. Blackwell, p. 267-302

    Research output: Chapter in Book/Report/Conference proceedingChapter

  44. Published

    Biogeochemistry of platelet ice: its influence on particle flux under fast ice in the Weddell Sea, Antarctica

    Thomas, D. N., Kennedy, H. A., Kattner, G., Gerdes, D., Gough, C. & Dieckmann, G. S., 1 Jul 2001, In: Polar Biology. 24, 7, p. 486-496

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Biogeochemistry of a subterranean acidic mine water body at an abandoned copper mine.

    Coupland, K., Rowe, O., Hallberg, K. B., Johnson, D. B., Jarvis, A. P. (Editor), Dudgeon, B. A. (Editor) & Younger, P. L. (Editor), 1 Jan 2004, p. 113-119.

    Research output: Contribution to conferencePaper

  46. Published

    Biogeochemistry of Antarctic sea ice.

    Thomas, D. N. & Dieckmann, G. S., 1 Jan 2002, In: Oceanography and Marine Biology. 40, p. 143-169

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Biogeochemical tags in fish: predicting spatial variations in strontium and manganese in Salmo trutta scales using stream water geochemistry

    Ramsay, A. L., Hughes, R. N., Chenery, S. R. & McCarthy, I. D., 11 Nov 2014, In: Canadian Journal of Fisheries and Aquatic Sciences. 72, 3, p. 422-433

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Biogeochemical observations during the winter-spring transition in East Antarctic sea ice: evidence of iron and exopolysaccharide controls.

    Van der Merwe, P., Lannuzel, D., Nichols, C. A., Meiners, K., Heil, P., Norman, L., Thomas, D. N. & Bowie, A. R., 20 Aug 2009, In: Marine Chemistry. 115, 3-4, p. 163-175

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Biogeochemical functioning of grazed estuarine tidal marshes along a salinity gradient

    Dausse, A., Garbutt, A., Norman, L., Papadimitriou, S., Jones, L. M., Robins, P. E. & Thomas, D. N., 20 Mar 2012, In: Estuarine, Coastal and Shelf Science. 100, p. 83-92

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Biogeochemical consequences of a changing Arctic shelf seafloor ecosystem

    Marz, C., Freitas, F., Faust, J., Godbold, J., Henley, S., Tessin, A., Arndt, S., Barnes, D., Grange, L., Gray, N., Head, I., Hendry, K., Hilton, R., Reed, A., Rhul, S., Solan, M., Souster, T., Stevenson, M., Tait, K. & Widdicombe, S., Feb 2022, In: AMBIO. 51, 2, p. 370–382 13 p.

    Research output: Contribution to journalArticlepeer-review