Cuniculiplasmataceae, their ecogenomic and metabolic patterns and interactions with ‘ARMAN’

Golyshina, O. V., Bargiela, R. & Golyshin, P. N., Jan 2019, In: Extremophiles. 23, 1, p. 1-7 7 p.

Research output: Contribution to journal › Article › peer-review

Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean

Matallana-Surget, S., Werner, J., Wattiez, R., Lebaron, K., Intertaglia, L., Regan, C., Morris, J., Teeling, H., Ferrer, M., Golyshin, P., Gerogiorgis, D., Reilly, S. I. & Lebaron, P., Dec 2018, In: Frontiers in Microbiology. 9, 3125.

Research output: Contribution to journal › Article › peer-review

Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters

Hajighasemi, M., Tchigvintsev, A., Nocek, B., Flick, R., Popovic, A., Hai, T., Khusnutdinova, A. N., Brown, G., Xu, X., Cui, H., Anstett, J., Chernikova, T., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Golyshina, O., Savchenko, A., Golyshin, P., Edwards, E. A. & Yakunin, A. F., 6 Nov 2018, In: Environmental Science and Technology. 52, 21, p. 12388-12401

Research output: Contribution to journal › Article › peer-review

Sulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes

Sorokin, D. Y., Messina, E., La Cono, V., Ferrero, M., Ciordia, S., Mena, M. C., Toshchakov, S. V., Golyshin, P. N. & Yakimoy, M. M., Oct 2018, In: Frontiers in Microbiology. 9, 2359.

Research output: Contribution to journal › Article › peer-review

Nano-Sized and Filterable Bacteria and Archaea: Biodiversity and Function

Ghuneim, L.-A., Jones, D. L., Golyshin, P. & Golyshina, O., 21 Aug 2018, In: Frontiers in Microbiology. 9, 1971.

Research output: Contribution to journal › Article › peer-review

Rational Engineering of Multiple Active Sites in an Ester Hydrolase

Santiago, G., Martinez-Martinez, M., Alonso, S., Bargiela, R., Coscolín, C., Golyshin, P., Guallar, V. & Ferrer, M., Mar 2018, In: Biochemistry. 57, 15, p. 2245-2255

Research output: Contribution to journal › Article › peer-review

Relationships between Substrate Promiscuity and Chiral Selectivity of Esterases from Phylogenetically and Environmentally Diverse Microorganisms

Coscolín, C., Martínez-Martínez, M., Chow, J., Bargiela, R., García-Moyano, A., Bjerga, G. E. K., Bollinger, A., Stokke, R., Steen, I. H., Golyshina, O., Yakimov, M. M., Jaeger, K.-E., Yakunin, A. F., Streit, W. R., Golyshin, P. & Ferrer, M., 5 Jan 2018, In: Catalysts. 8, 1, 10.

Research output: Contribution to journal › Article › peer-review

Determinants and prediction of esterase substrate promiscuity patterns

Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K.-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, In: ACS Chemical Biology. 13, 1, p. 225-234

Research output: Contribution to journal › Article › peer-review

Members of the Uncultured Taxon OP1 (''Acetothermia'') Predominate in the Microbial Community of an Alkaline Hot Spring at East-Tuvinian Upland

Korzhenkov, A. A., Teplyuk, A. V., Lebedinsky, A. V., Khvashchevskaya, A. A., Kopylova, Y. G., Arakchaa, K. D., Golyshin, P. N., Lunev, E. A., Golyshina, O. V., Kublanov, I. V., Toshchakov, S. V. & Gavrilov, S. N., 2018, In: Microbiology. 87, 6, p. 783-795 13 p.

Research output: Contribution to journal › Article › peer-review

Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline

Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S. A., Scarlett, K., Griffiths, A., Kaczmarek, M., Foster, J., Peace, A., Golyshin, P., Hassard, F., Brown, N., Kenny, J. G. & McDonald, J., 2018, In: The ISME Journal. 12, p. 386-399

Research output: Contribution to journal › Article › peer-review

The rumen microbiome: an underexplored resource for novel antimicrobial discovery

Oyama, L. B., Girdwood, S. E., Cookson, A. R., Fernanadez-Fuentes, N., Prive, F., Vallin, H. E., Wilkinson, T. J., Golyshin, P., Golyshina, O., Mikut, R., Hilpert, K., Richards, J., Wootton, M., Edwards, J. E., Maresca, M., Perrier, J., Lundy, F. T., Luo, Y., Zhou, M., Hess, M., Mantovani, H. C., Creevey, C. J. & Huws, S. A., 1 Dec 2017, In: NPJ Biofilms and Microbiomes. 3, 33 .

Research output: Contribution to journal › Article › peer-review

The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle

Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In: Marine Genomics. 36, p. 41-47

Research output: Contribution to journal › Article › peer-review

A communal catalogue reveals Earth's multiscale microbial diversity

Thompson, L. R., Sanders, J. G., McDonald, D., Amir, A., Ladau, J., Locey, K. J., Prill, R. J., Tripathi, A., Gibbons, S. M., Ackermann, G., Navas-Molina, J. A., Janssen, S., Kopylova, E., Vazquez-Baeza, Y., Gonzalez, A., Morton, J. T., Mirarab, S., Xu, Z. Z., Jiang, L., Haroon, M. F., Kanbar, J., Zhu, Q., Song, S. J., Kosciolek, T., Bokulich, N. A., Lefler, J., Brislawn, C. J., Humphrey, G., Owens, S. M., Hampton-Marcell, J., Berg-Lyons, D., McKenzie, V., Fierer, N., Fuhrman, J. A., Clauset, A., Stevens, R. L., Shade, A., Pollard, K. S., Goodwin, K. D., Jansson, J. K., Gilbert, J. A., Knight, R., Agosto Rivera, J. L., Al-Moosawi, L., Alverdy, J., Amato, K. R., Andras, J., Angenent, L. T., Antonopoulos, D. A., Apprill, A., Armitage, D., Ballantine, K., Bárta, J., Baum, J. K., Berry, A., Bhatnagar, A., Bhatnagar, M., Biddle, J. F., Bittner, L., Boldgiv, B., Bottos, E., Boyer, D. M., Braun, J., Brazelton, W., Brearley, F. Q., Campbell, A. H., Caporaso, J. G., Cardona, C., Carroll, J., Cary, S. C., Casper, B. B., Charles, T. C., Chu, H., Claar, D. C., Clark, R. G., Clayton, J. B., Clemente, J. C., Cochran, A., Coleman, M. L., Collins, G., Colwel, R. R., Contreras, M., Crary, B. B., Creer, S., Cristol, D. A., Crump, B. C., Cui, D., Daly, S. E., Davalos, L., Dawson, R. D., Defazio, J., Delsuc, F., Dionisi, H. M., Dominguez-Bello, M. G., Dowell, R., Dubinsky, E. A., Dunn, P. O., Ercolini, D., Espinoza, R. E., Ezenwa, V., Fenner, N., Findlay, H. S., Fleming, I. D., Fogliano, V., Forsman, A., Freeman, C., Friedman, E. S., Galindo, G., Garcia, L., Garcia-Amado, M. A., Garshelis, D., Gasser, R. B., Gerdts, G., Gibson, M. K., Gifford, I., Gill, R. T., Giray, T., Gittel, A., Golyshin, P., Gong, D., Grossart, H.-P., Guyton, K., Haig, S.-J., Hale, V., Hall, R. S., Hallam, S. J., Handley, K. M., Hasan, N. A., Haydon, S. R., Hickman, J. E., Hidalgo, G., Hofmockel, K. S., Hooker, J., Hulth, S., Hultman, J., Hyde, E., Ibáñez-Álamo, J. D., Jastrow, J. D., Jex, A. R., Johnson, L. S., Johnston, E. R., Joseph, S., Jurburg, S. D., Jurelevicius, D., Karlsson, A., Karlsson, R., Kauppinen, S., Kellogg, C. T. E., Kennedy, S. J., Kerkhof, L. J., King, G. M., Kling, G. W., Koehler, A. V., Krezalek, M., Kueneman, J., Lamendella, R., Landon, E. M., Lane-deGraaf, K., LaRoche, J., Larsen, P., Laverock, B., Lax, S., Lentino, M., Levin, I. I., Liancourt, P., Liang, W., Linz, A. M., Lipson, D. A., Liu, Y., Lladser, M. E., Lozada, M., Spirito, C. M., MacCormack, W. P., MacRae-Crerar, A., Magris, M., Martín-Platero, A. M., Martín-Vivaldi, M., Martínez, L. M., Martínez-Bueno, M., Marzinelli, E. M., Mason, O. U., Mayer, G. D., McDevitt-Irwin, J. M., McDonald, J., McGuire, K. L., McMahon, K. D., McMinds, R., Medina, M., Mendelson, J. R., Metcalf, J. L., Meyer, F., Michelangeli, F., Miller, K., Mills, D. A., Minich, J., Mocali, S., Moitinho-Silva, L., Moore, A., Morgan-Kiss, R. M., Munroe, P., Myrold, D., Neufeld, J. D., Ni, Y., Nicol, G. W., Nielsen, S., Nissimov, J. I., Niu, K., Nolan, M. J., Noyce, K., O’Brien, S. L., Okamoto, N., Orlando, L., Ortiz Castellano, Y., Osuolale, O., Oswald, W., Parnell, J., Peralta-Sánchez, J. M., Petraitis, P., Pfister, C., Pilon-Smits, E., Piombino, P., Pointing, S. B., Pollock, F. J., Potter, C., Prithiviraj, B., Quince, C., Rani, A., Ranjan, R., Rao, S., Rees, A. P., Richardson, M., Riebesell, U., Robinson, C., Rockne, K. J., Rodriguezl, S. M., Rohwer, F., Roundstone, W., Safran, R. J., Sangwan, N., Sanz, V., Schrenk, M., Schrenzel, M. D., Scott, N. M., Seger, R. L., Seguin-Orlando, A., Seldin, L., Seyler, L. M., Shakhsheer, B., Sheets, G. M., Shen, C., Shi, Y., Shin, H., Shogan, B. D., Shutler, D., Siegel, J., Simmons, S., Sjöling, S., Smith, D. P., Soler, J. J., Sperling, M., Steinberg, P. D., Stephens, B., Stevens, M. A., Taghavi, S., Tai, V., Tait, K., Tan, C. L., Tas, N., Taylor, D. L., Thomas, T., Timling, I., Turner, B. L., Urich, T., Ursell, L. K., van der Lelie, D., Van Treuren, W., van Zwieten, L., Vargas-Robles, D., Vega Thurber, R., Vitaglione, P., Walker, D. A., Walters, W. A., Wang, S., Wang, T., Weave, T., Webster, N. S., Wehrle, B., Weisenhorn, P., Weiss, S., Werner, J. J., West, K., Whitehead, A., Whitehead, S. R., Whittingham, L. A., Willerslev, E., Williams, A. E., Wood, S. A., Woodhams, D. C., Yang, Y., Zaneveld, J., Zarraonaindia, I., Zhang, Q. & Zhao, H., 23 Nov 2017, In: Nature. 551, 7681, p. 457-+

Research output: Contribution to journal › Article › peer-review

Microbial use of low molecular weight DOM in filtered and unfiltered freshwater: Role of ultra-small microorganisms and implications for water quality monitoring

Brailsford, F., Glanville, H., Marshall, M., Golyshin, P., Jones, P. J., Yates, C. A., Owen, A. T. & Jones, D. L., 15 Nov 2017, In: Science of the Total Environment. 598, p. 377-384

Research output: Contribution to journal › Article › peer-review

Monaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK

Chernikova, T., Dallimore, J., Lunsdorf, H., Heipieper, H. J. & Golyshin, P., 1 Sept 2017, In: International Journal of Systematic Evolutionary Microbiology. 67, p. 3310-3317

Research output: Contribution to journal › Article › peer-review

Ferrous iron- and ammonium-rich diffuse vents support habitat-specific communities in a shallow hydrothermal field off the Basiluzzo Islet (Aeolian Volcanic Archipelago)

Bortoluzzi, G., Romeo, T., La Cono, V., La Spada, G., Smedile, F., Esposito, V., Sabatino, G., Di Bella, M., Canese, S., Scotti, G., Bo, M., Giuliano, L., Golyshin, P., Jones, D., Yakimov, M. M. & Andaloro, F., Sept 2017, In: Geobiology. 15, 5, p. 664-677

Research output: Contribution to journal › Article › peer-review

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems

Potter, C., Freeman, C., Golyshin, P., Ackerman, G., Fenner, N., McDonald, J., Ehbair, A., Jones, T., Murphy, L. & Creer, S., Sept 2017, In: Scientific Reports. 7, 11314.

Research output: Contribution to journal › Article › peer-review

Buwchitin: A Ruminal Peptide with Antimicrobial Potential against Enterococcus faecalis

Oyama, L. B., Crochet, J.-A., Edwards, J. E., Girdwood, S. E., Cookson, A. R., Fernandez-Fuentes, N., Hilpert, K., Golyshin, P., Golyshina, O., Prive, F., Hess, M., Mantovani, H. C., Creevey, C. J. & Huws, S. A., 12 Jul 2017, In: Frontiers in Chemistry.

Research output: Contribution to journal › Article › peer-review

Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT

Golyshina, O., Hai, T., Reva, O. N., Lemak, S., Yakunin, A. F., Goesmann, A., Nechitaylo, T. Y., LaCono, V., Smedile, F., Slesarev, A., Rojo, D., Barbas, C., Ferrer, M., Yakimov, M. M. & Golyshin, P., 16 Jun 2017, In: Scientific Reports. 7, 3682.

Research output: Contribution to journal › Article › peer-review

Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis

Sorokin, D. Y., Makarova, K. S., Abbas, B., Ferrer, M., Golyshin, P., Galinski, E. A., Ciordia, S., Mena, M. C., Merkel, A. Y., Wolf, Y. I., van Loosdrecht, M. C. M. & Koonin, E. V., May 2017, In: Nature Microbiology. 2, 17081 .

Research output: Contribution to journal › Article › peer-review

Multidrug Resistance and High Prevalence of class 1 Integrons in Escherichia coli Isolated from Irrigation Water and Vegetables in Parts of Nsukka and Enugu, Nigeria

Chigor, C. B., Ibangha, I.-A. I., Onuora, V. C., Omotosho, O. E., Chernikova, T., Chigor, V. N. & Golyshin, P., 1 Apr 2017, In: Faseb Journal. 31, S1, 777.22.

Research output: Contribution to journal › Meeting Abstract › peer-review

Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Mar 2017, In: Scientific Reports. 7, 44103, 44103.

Research output: Contribution to journal › Article › peer-review

Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats

Sorokin, D. Y., Messina, E., Smedile, F., Roman, P., Sinninghe Damste, J. S., Ciordia, S., Mena, M. C., Ferrer, M., Golyshin, P., Kublanov, I. V., Samarov, N. I., Toshchakov, S. V., La Cono, V. & Yakimov, M. M., 20 Jan 2017, In: ISME Journal. 11, p. 1245-1260

Research output: Contribution to journal › Article › peer-review

“ARMAN” archaea depend on association with euryarchaeal host in culture and in situ

Golyshina, O., Toshchakov, S. V., Makarova, K. S., Gavrilov, S. N., Korzhenkov, A. A., La Cono, V., Arcadi, E., Nechitaylo, T. Y., Ferrer, M., Kublanov, I. V., Wolf, Y. I., Yakimov, M. M. & Golyshin, P., 2017, In: Nature Communications. 8, 60.

Research output: Contribution to journal › Article › peer-review

Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data

Bourguignon, N., Bargiela, R., Rojo, D., Chernikova, T., Lopez de Rodas, S. A., Garcia-Cantalejo, J., Nather, D. J., Golyshin, P., Barbas, C., Ferrero, M. & Ferrer, M., 1 Dec 2016, In: World Journal of Microbiology and Biotechnology. 32, 201

Research output: Contribution to journal › Article › peer-review

Biology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments

Golyshina, O., Kublanov, I. V., Hai, T., Korzhenkov, A. A., Lunsdorf, H., Nechitaylo, T. Y., Toshchakov, S. V. & Golyshin, P., Dec 2016, In: Scientific Reports. 6, 39034.

Research output: Contribution to journal › Article › peer-review

Structural and functional characterization of a ruminal β-glycosidase defines a novel subfamily of glycosyl hydrolase family 3 with permuted domain topology

Ramirez-Escudero, M., del Pozo, M. V., Marin-Navarro, J., Gonzalez, B., Golyshin, P., Polaina, J., Ferrer, M. & Sanz-Aparico, J., 11 Nov 2016, In: Journal of Biological Chemistry. 291, p. 24200-24214

Research output: Contribution to journal › Article › peer-review

Combined whole-cell high-throughput functional screening for identification of new nicotinamidases/pyrazinamidases in metagenomic/polygenomic libraries

Zapata-Perez, R., Garcia-Saura, A. G., Jebbar, M., Golyshin, P. & Sanchez-Ferrer, A., Nov 2016, In: Frontiers in Microbiology. 7, 1915.

Research output: Contribution to journal › Article › peer-review

Antibacterial Activity and Mechanism of Action of a novel Antimicrobial Peptide Palg1 and its potential against Enterococcus Faecalis Infection

Oyama, L., Crochet, J.-A., Girdwood, S., Cookson, A., Prive, F., Fernandez-Fuentes, N., Edwards, J., Mikut, R., Hilpert, K., Golyshin, P., Golyshina, O., Creevey, C. & Huws, S., Sept 2016, In: Journal of Peptide Science. 22, S2, p. S188-S188

Research output: Contribution to journal › Meeting Abstract › peer-review

Analysis of defence systems and a conjugative IncP-1 plasmid in the marine polyaromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME

Yakimov, M. M., Crisafi, F., Messina, E., Smedile, F., Lopatina, A., Denaro, R., Pieper, D. H., Golyshin, P. & Giuliano, L., 5 Jul 2016, In: Environmental Microbiology Reports. 8, 4, p. 508-519

Research output: Contribution to journal › Article › peer-review

Biochemical and structural insights into enzymatic depolymerization of polylactic acid and other polyesters by microbial carboxylesterases

Hajighasemi, M., Nocek, B. P., Tchigvintsev, A., Brown, G., Flick, R., Xu, X., Cui, H., Hai, T., Joachimiak, A., Golyshin, P., Savchenko, A., Edwards, E. A. & Yakunin, A. F., 18 Apr 2016, In: Biomacromolecules. 17, 6, p. 2027-2039

Research output: Contribution to journal › Article › peer-review

Biodiversity for biocatalysis: A review of the α/β-hydrolase fold superfamily of esterases-lipases discovered in metagenomes

Ferrer, M., Bargiela, R., Martínez-Martínez, M., Mir, J., Koch, R., Golyshina, O. & Golyshin, P., 1 Mar 2016, In: Biocatalysis and Biotransformation . 33, 5-6, p. 235-249

Research output: Contribution to journal › Article › peer-review

Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends

Ferrer, M., Martinez, M., Bargiela, R., Streit, W. R., Golyshina, O. & Golyshin, P., 1 Jan 2016, In: Microbial Biotechnology. 9, 1, p. 22-34

Research output: Contribution to journal › Article › peer-review

Elemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon

Sorokin, D. Y., Kublanov, I. V., Gavrilov, S. N., Rojo, D., Roman, P., Golyshin, P., Slepak, V. Z., Smedile, F., Ferrer, M., Messina, E., La Cono, V. & Yakimov, M. M., Jan 2016, In: ISME Journal. 10, p. 240-252

Research output: Contribution to journal › Article › peer-review

The novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales

Golyshina, O., Lünsdorf, H., Kublanov, I. V., Goldenstein, N. I., Hinrichs, K.-U. & Golyshin, P., Jan 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 1, p. 332-340

Research output: Contribution to journal › Article › peer-review

Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase

Placido, A., Hai, T., Ferrer, M., Chernikova, T. N., Distaso, M. A., Armstrong, D., Yakunin, A. F., Toshchakov, S. V., Yakimov, M. M., Kublanov, I. V., Golyshina, O., Pesole, G., Ceci, L. R. & Golyshin, P., 1 Dec 2015, In: Applied Microbiology and Biotechnology. 99, 23, p. 10031-10046

Research output: Contribution to journal › Article › peer-review

Degradation Network Reconstruction in Uric Acid and Ammonium Amendments in Oil-Degrading Marine Microcosms Guided by Metagenomic Data

Bargiela, R., Gertler, C., Mapelli, F., Magagnini, M., Chen, J., Daffonchio, D., Golyshin, P. & Ferrer, M., 24 Nov 2015, In: Frontiers in Microbiology. 6

Research output: Contribution to journal › Article › peer-review

Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea

Messina, E., Denaro, R., Crisafi, F., Smedile, F., Cappello, S., Genovese, M., Genovese, L., Giuliano, L., Russo, D., Ferrer, M. & Golyshin, P., 24 Oct 2015, In: Marine Genomics. 25, p. 11-13

Research output: Contribution to journal › Article › peer-review

Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads

Gertler, C., Bargiela, R., Mapelli, F., Han, X. F., Chen, J. W., Hai, T., Amer, R. A., Mahjoubi, M., Malkawi, H., Magagnini, M., Cherif, A., Abdel-Fattah, Y. R., Kalogerakis, N., Daffonchio, D., Ferrer, M. & Golyshin, P. N., 1 Oct 2015, In: Microbial Ecology. 70, 3, p. 724-740

Research output: Contribution to journal › Article › peer-review

Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

Bargiela, R., Herbst, F. A., Martinez-Martinez, M., Seifert, J., Rojo, D., Cappello, S., Genovese, M., Crisafi, F., Denaro, R., Chernikova, T. N., Barbas, C., von Bergen, M., Yakimov, M. M., Ferrer, M. & Golyshin, P. N., 27 Aug 2015, In: Proteomics. 15, 20, p. 3508-3520

Research output: Contribution to journal › Article › peer-review

Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature

Bargiela, R., Mapelli, F., Rojo, D., Chouaia, B., Tornés, J., Borin, S., Richter, M., Del Pozo, M. V., Cappello, S., Gertler, C., Genovese, M., Denaro, R., Martínez-Martínez, M., Fodelianakis, S., Amer, R. A., Bigazzi, D., Han, X., Chen, J., Chernikova, T. N., Golyshina, O. V., Mahjoubi, M., Jaouanil, A., Benzha, F., Magagnini, M., Hussein, E., Al-Horani, F., Cherif. A., [. V., Blaghen, M., Abdel-Fattah, Y. R., Kalogerakis, N., Barbas, C., Malkawi, H. I., Golyshin, P. N., Yakimov, M. M., Daffonchio, D. & Ferrer, M., 29 Jun 2015, In: Scientific Reports. 5, p. Article Number 11651

Research output: Contribution to journal › Article › peer-review

The ocean sampling day consortium

Golyshin, P., Kopf, A., Bicak, M., Kottmann, R., Schnetzer, J., Kostadinov, I., Lehmann, K., Fernandez-Guerra, A., Jeanthon, C., Rahav, E., Ullrich, M., Wichels, A., Gerdts, G., Polymenakou, P., Kotoulas, G., Siam, R., Abdallah, R. Z., Sonnenschein, E. C., Cariou, T., O'Gara, F., Jackson, S., Orlic, S., Steinke, M., Busch, J., Duarte, B., Cacador, I., Canning-Clode, J., Bobrova, O., Marteinsson, V., Reynisson, E., Loureiro, C. M., Luna, G. M., Quero, G. M., Loscher, C. R., Kremp, A., DeLorenzo, M. E., Ovreas, L., Tolman, J., LaRoche, J., Penna, A., Frischer, M., Davis, T., Katherine, B., Meyer, C. P., Ramos, S., Magalhaes, C., Jude-Lemeilleur, F., Aguirre-Macedo, M. L., Wang, S., Poulton, N., Jones, S., Collin, R., Fuhrman, J. A., Conan, P., Alonso, C., Stambler, N., Goodwin, K., Yakimov, M. M., Baltar, F., Bodrossy, L., Van De Kamp, J., Frampton, D. M., Ostrowski, M., Van Ruth, P., Malthouse, P., Claus, S., Deneudt, K., Mortelmans, J., Pitois, S., Wallom, D., Salter, I., Costa, R., Schroeder, D. C., Kandil, M. M., Amaral, V., Biancalana, F., Santana, R., Pedrotti, M. L., Yoshida, T., Ogata, H., Ingleton, T., Munnik, K., Rodriguez-Ezpeleta, N., Berteaux-Lecellier, V., Wecker, P., Cancio, I., Vaulot, D., Bienhold, C., Ghazal, H., Chaouni, B., Essayeh, S., Ettamimi, S., Zaid, E., Boukhatem, N., Bouali, A., Chahboune, R., Barrijal, S., Timinouni, M., El Otmani, F., Bennani, M., Mea, M., Todorova, N., Karamfilov, V., ten Hoopen, P., Cochrane, G., L'Haridon, S., Bizsel, K. C., Vezzi, A., Lauro, F. M., Martin, P., Jensen, R. M., Hinks, J., Gebbels, S., Rosselli, R., De Pascale, F., Schiavon, R., dos Santos, A., Villar, E., Pesant, S., Cataletto, B., Malfatti, F., Edirisinghe, R., Silveira, J. A., Barbier, M., Turk, V., Tinta, T., Fuller, W. J., Salihoglu, I., Serakinci, N., Ergoren, M. C., Bresnan, E., Iriberri, J., Nyhus, P. A., Bente, E., Karlsen, H. E., Golyshin, P. N., Gasol, J. M., Moncheva, S., Dzhembekova, N., Johnson, Z., Sinigalliano, C. D., Gidley, M. L., Zingone, A., Danovaro, R. & Tsiamis, G., 19 Jun 2015, In: Giga Science. 4, 27

Research output: Contribution to journal › Article › peer-review

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes

Tchigvintsev, A., Tran, H., Popvic, A., Kovacic, F., Brown, G., Flick, R., Hajighasemi, M., Egorova, O., Somody, J. C., Tchigvintsev, D., Khusnutdinova, A., Chernikova, T. N., Golyshina, O., Yakimov, M. M., Savchenko, A., Golyshin, P., Jaeger, K. E. & Yakunin, A. F., 1 Mar 2015, In: Applied Microbiology and Biotechnology. 99, 5, p. 2165-2178

Research output: Contribution to journal › Article › peer-review

Microbial community of the deep-sea brine Lake Kryos seawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA

Golyshin, P., Yakimov, M. M., La Cono, V., La Spada, G., Bortoluzzi, G., Messina, E., Smedile, F., Arcadi, E., Borghini, M., Ferrer, M., Schmitt-Kopplin, P., Hertkorn, N., Cray, J. A., Hallsworth, J. E., Golyshin, P. N. & Giuliano, L., 1 Feb 2015, In: Environmental Microbiology. 17, 2, p. 364-382

Research output: Contribution to journal › Article › peer-review

Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata using functional metagenomics

Alcaide, M., Tchigvinstsev, A., Martinez-Martinez, M., Popovic, A., Reva, O. N., Lafraya, A., Bargiela, R. N., Nechitaylo, T. Y., Matesanz, R., Cambon-Bonavita, M., Jebbar, M., Savchenko, A., Yakimov, M. M., Golyshina, O., Yakunin, A. F., Golyshin, P., Ferrer, M. & The MAMBA Consortium., [. V., 16 Jan 2015, In: Applied and Environmental Microbiology. 81, 6, p. 2125-2136

Research output: Contribution to journal › Article › peer-review