Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

Popovic, A., Hai, T., Tchigvintsev, A., Hajighasemi, M., Nocek, B., Khusnutdinova, A. N., Brown, G., Glinos, J., Flick, R., Skarina, T., Chernikova, T., Yim, V., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Ferrer, M., Golyshina, O., Savchenko, A., Golyshin, P. & Yakunin, A. F., Mar 2017, In: Scientific Reports. 7, 44103, 44103.

Research output: Contribution to journal › Article › peer-review

Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity

Korzhenkov, A. A., Toshchakov, S. V., Bargiela, R., Gibbard, H., Ferrer, M., Teplyuk, A. V., Jones, D. L., Kublanov, I. V., Golyshin, P. & Golyshina, O., 28 Jan 2019, In: Microbiome. 7, 1, 11.

Research output: Contribution to journal › Article › peer-review

Biodiversity for biocatalysis: A review of the α/β-hydrolase fold superfamily of esterases-lipases discovered in metagenomes

Ferrer, M., Bargiela, R., Martínez-Martínez, M., Mir, J., Koch, R., Golyshina, O. & Golyshin, P., 1 Mar 2016, In: Biocatalysis and Biotransformation . 33, 5-6, p. 235-249

Research output: Contribution to journal › Article › peer-review

Biology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments

Golyshina, O., Kublanov, I. V., Hai, T., Korzhenkov, A. A., Lunsdorf, H., Nechitaylo, T. Y., Toshchakov, S. V. & Golyshin, P., Dec 2016, In: Scientific Reports. 6, 39034.

Research output: Contribution to journal › Article › peer-review

Bioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines

Coscolín, C., Katzke, N., Garcia-Moyano, A., Navarro-Fernández, J., Almendral, D., Martinez-Martinez, M., Bollinger, A., Bargiela, R., Gerler, C., Chernikova, T. N., Rojo, D., Barbas, C., Tran, H., Golyshina, O. V., Koch, R., Yakimov, M. M., Bjerga, G. E. K., Golyshin, P. N., Jaeger, K.-E. & Ferrer, M., 9 Jan 2019, In: Applied and Environmental Microbiology. 85, 2, e02404-18.

Research output: Contribution to journal › Article › peer-review

Combined whole-cell high-throughput functional screening for identification of new nicotinamidases/pyrazinamidases in metagenomic/polygenomic libraries

Zapata-Perez, R., Garcia-Saura, A. G., Jebbar, M., Golyshin, P. & Sanchez-Ferrer, A., Nov 2016, In: Frontiers in Microbiology. 7, 1915.

Research output: Contribution to journal › Article › peer-review

Cuniculiplasmataceae, their ecogenomic and metabolic patterns and interactions with ‘ARMAN’

Golyshina, O. V., Bargiela, R. & Golyshin, P. N., Jan 2019, In: Extremophiles. 23, 1, p. 1-7 7 p.

Research output: Contribution to journal › Article › peer-review

Degradation Network Reconstruction in Uric Acid and Ammonium Amendments in Oil-Degrading Marine Microcosms Guided by Metagenomic Data

Bargiela, R., Gertler, C., Mapelli, F., Magagnini, M., Chen, J., Daffonchio, D., Golyshin, P. & Ferrer, M., 24 Nov 2015, In: Frontiers in Microbiology. 6

Research output: Contribution to journal › Article › peer-review

Determinants and prediction of esterase substrate promiscuity patterns

Martínez-Martínez, M., Coscolín, C., Santiago, G., Chow, J., Stogios, P. J., Bargiela, R., Gertler, C., Navarro-Fernández, J., Bollinger, A., Thies, S., Méndez-García, C., Popovic, A., Brown, G., Chernikova, T., García-Moyano, A., Bjerga, G. E. K., Perez-Garcia, P., Hai, T., del Pozo, M. V., Stokke, R., Steen, I. H., Cui, H., Xu, X., Nocek, B., Alcaide, M., Disasto, M., Mesa, V., Pelaez, A. I., Sanchez, J., Buchholz, P. C. F., Pleiss, J., Fernández-Guerra, A., Glockner, F. O., Golyshina, O., Yakimov, M. M., Savchenko, A., Jaeger, K.-E., Yakunin, A. F., Streit, W. R., Golyshin, P., Guallar, V. & Ferrer, M., 2018, In: ACS Chemical Biology. 13, 1, p. 225-234

Research output: Contribution to journal › Article › peer-review

Diversity of “Ca. Micrarchaeota” in two distinct types of acidic environments and their associations with Thermoplasmatales

Golyshina, O., Bargiela, R., Toshchakov, S. V., Chernyh, N. A., Ramayah, S., Korzhenkov, A. A., Kublanov, I. V. & Golyshin, P., 15 Jun 2019, In: Genes. 10, 6, 461.

Research output: Contribution to journal › Article › peer-review

Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends

Ferrer, M., Martinez, M., Bargiela, R., Streit, W. R., Golyshina, O. & Golyshin, P., 1 Jan 2016, In: Microbial Biotechnology. 9, 1, p. 22-34

Research output: Contribution to journal › Article › peer-review

Genetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis

Alonso, S., Santiago, G., Cea-Rama, I., Fernandez-Lopez, L., Coscolín, C., Modregger, J., Ressmann, A. K., Martinez-Martinez, M., Marrero, H., Bargiela, R., Pita, M., Gonzalez-Alfonso, J. L., Briand, M. L., Rojo, D., Barbas, C., Plou, F. J., Golyshin, P., Shahgaldian, P., Sanz-Aparicio, J., Guallar, V. & Ferrer, M., Mar 2020, In: Nature Catalysis. 3, 3, p. 319-328

Research output: Contribution to journal › Article › peer-review

Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT

Golyshina, O., Hai, T., Reva, O. N., Lemak, S., Yakunin, A. F., Goesmann, A., Nechitaylo, T. Y., LaCono, V., Smedile, F., Slesarev, A., Rojo, D., Barbas, C., Ferrer, M., Yakimov, M. M. & Golyshin, P., 16 Jun 2017, In: Scientific Reports. 7, 3682.

Research output: Contribution to journal › Article › peer-review

Microbial Communities of Polymetallic Deposits’ Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts

Gavrilov, S. N., Korzhenkov, A. A., Kublanov, I. V., Bargiela, R., Zamana, L. V., Toshchakov, S. V., Golyshin, P. & Golyshina, O., 17 Jul 2019, In: Frontiers in Microbiology.

Research output: Contribution to journal › Article › peer-review

Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean

Matallana-Surget, S., Werner, J., Wattiez, R., Lebaron, K., Intertaglia, L., Regan, C., Morris, J., Teeling, H., Ferrer, M., Golyshin, P., Gerogiorgis, D., Reilly, S. I. & Lebaron, P., Dec 2018, In: Frontiers in Microbiology. 9, 3125.

Research output: Contribution to journal › Article › peer-review

Rational Engineering of Multiple Active Sites in an Ester Hydrolase

Santiago, G., Martinez-Martinez, M., Alonso, S., Bargiela, R., Coscolín, C., Golyshin, P., Guallar, V. & Ferrer, M., Mar 2018, In: Biochemistry. 57, 15, p. 2245-2255

Research output: Contribution to journal › Article › peer-review

Relationships between Substrate Promiscuity and Chiral Selectivity of Esterases from Phylogenetically and Environmentally Diverse Microorganisms

Coscolín, C., Martínez-Martínez, M., Chow, J., Bargiela, R., García-Moyano, A., Bjerga, G. E. K., Bollinger, A., Stokke, R., Steen, I. H., Golyshina, O., Yakimov, M. M., Jaeger, K.-E., Yakunin, A. F., Streit, W. R., Golyshin, P. & Ferrer, M., 5 Jan 2018, In: Catalysts. 8, 1, 10.

Research output: Contribution to journal › Article › peer-review

Screening and Characterization of Novel Polyesterases from Environmental Metagenomes with High Hydrolytic Activity against Synthetic Polyesters

Hajighasemi, M., Tchigvintsev, A., Nocek, B., Flick, R., Popovic, A., Hai, T., Khusnutdinova, A. N., Brown, G., Xu, X., Cui, H., Anstett, J., Chernikova, T., Bruls, T., Le Paslier, D., Yakimov, M. M., Joachimiak, A., Golyshina, O., Savchenko, A., Golyshin, P., Edwards, E. A. & Yakunin, A. F., 6 Nov 2018, In: Environmental Science and Technology. 52, 21, p. 12388-12401

Research output: Contribution to journal › Article › peer-review

Structure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase

Cea-Rama, I., Coscolín, C., Katsonis, P., Bargiela, R., Golyshin, P., Lichtarge, O., Ferrer, M. & Sanz-Aparicio, J., 2021, In: Computational and Structural Biotechnology Journal. 19, p. 2307-2317 11 p.

Research output: Contribution to journal › Article › peer-review

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems

Potter, C., Freeman, C., Golyshin, P., Ackerman, G., Fenner, N., McDonald, J., Ehbair, A., Jones, T., Murphy, L. & Creer, S., Sept 2017, In: Scientific Reports. 7, 11314.

Research output: Contribution to journal › Article › peer-review

Sulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes

Sorokin, D. Y., Messina, E., La Cono, V., Ferrero, M., Ciordia, S., Mena, M. C., Toshchakov, S. V., Golyshin, P. N. & Yakimoy, M. M., Oct 2018, In: Frontiers in Microbiology. 9, 2359.

Research output: Contribution to journal › Article › peer-review

The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle

Toshchakov, S. V., Korzhenkov, A. A., Chernikova, T., Ferrer, M., Golyshina, O., Yakimov, M. M. & Golyshin, P., Dec 2017, In: Marine Genomics. 36, p. 41-47

Research output: Contribution to journal › Article › peer-review

The novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales

Golyshina, O., Lünsdorf, H., Kublanov, I. V., Goldenstein, N. I., Hinrichs, K.-U. & Golyshin, P., Jan 2016, In: International Journal of Systematic and Evolutionary Microbiology. 66, 1, p. 332-340

Research output: Contribution to journal › Article › peer-review

The rumen microbiome: an underexplored resource for novel antimicrobial discovery

Oyama, L. B., Girdwood, S. E., Cookson, A. R., Fernanadez-Fuentes, N., Prive, F., Vallin, H. E., Wilkinson, T. J., Golyshin, P., Golyshina, O., Mikut, R., Hilpert, K., Richards, J., Wootton, M., Edwards, J. E., Maresca, M., Perrier, J., Lundy, F. T., Luo, Y., Zhou, M., Hess, M., Mantovani, H. C., Creevey, C. J. & Huws, S. A., 1 Dec 2017, In: NPJ Biofilms and Microbiomes. 3, 33 .

Research output: Contribution to journal › Article › peer-review

“ARMAN” archaea depend on association with euryarchaeal host in culture and in situ

Golyshina, O., Toshchakov, S. V., Makarova, K. S., Gavrilov, S. N., Korzhenkov, A. A., La Cono, V., Arcadi, E., Nechitaylo, T. Y., Ferrer, M., Kublanov, I. V., Wolf, Y. I., Yakimov, M. M. & Golyshin, P., 2017, In: Nature Communications. 8, 60.

Research output: Contribution to journal › Article › peer-review