College of Science & Engineering

  1. Review article › Research › Peer-reviewed
  2. Published

    Genome sequence of the nematode C-elegans: A platform for investigating biology

    C. elegans sequencing consortium & Smith, A., 11 Dec 1998, In: Science. 282, 5396, p. 2012-2018

    Research output: Contribution to journalReview articlepeer-review

  3. Published

    Harnessing extremophilic carboxylesterases for applications in polyester depolymerisation and plastic waste recycling

    Williams, G., Ma, H., Khusnutdinova, A., Yakunin, A. & Golyshin, P., Aug 2023, In: Essays in Biochemistry. 67, 4, p. 715-729 15 p., EBC20220255.

    Research output: Contribution to journalReview articlepeer-review

  4. Published

    How do draining and re-wetting affect carbon stores and greenhouse gas fluxes in peat soils? Systematic Review

    Bussell, J., Jones, D., Healey, J. & Pullin, A., 2010, In: Environmental Evidence. SR49.

    Research output: Contribution to journalReview articlepeer-review

  5. Published

    How effective is ‘greening’ of urban areas in reducing human exposure to ground-level ozone concentrations, UV exposure and the ‘urban heat island effect’? An updated systematic review

    Knight, T., Price, S., Bowler, D., Hookway, A., King, S., Konno, K. & Richter, R. L., 2021, In: Environmental Evidence. 10, 1, 12.

    Research output: Contribution to journalReview articlepeer-review

  6. Published

    How the worm was won - the C-elegans genome sequencing project

    C. elegans sequencing consortium & Smith, A., Feb 1999, In: Trends in Genetics. 15, 2, p. 51-58

    Research output: Contribution to journalReview articlepeer-review

  7. Published

    Impacts of abiotic stresses on the physiology and metabolism of cool-season grasses: A review

    Loka, D., Harper, J., Humphreys, M., Gasior, D., Wootton-Beard, P., Gwynn-Jones, D., Scullion, J., Doonan, J., Kingston-Smith, A., Dodd, R., Wang, J., Chadwick, D., Hill, P., Jones, D., Mills, G., Hayes, F. & Robinson, D., Feb 2019, In: Food and Energy Security. 8, 1, e00152.

    Research output: Contribution to journalReview articlepeer-review

  8. Published

    Increasing Demand for Natural Rubber Necessitates a Robust Sustainability Initiative to Mitigate Impacts on Tropical Biodiversity

    Warren-Thomas, E., Dolman, P. M. & Edwards, D. P., 1 Jul 2015, In: Conservation Letters. 8, 4, p. 230-241

    Research output: Contribution to journalReview articlepeer-review

  9. Published

    Inference of natural selection from ancient DNA

    Dehasque, M., Ávila-Arcos, M. C., Díez‐del‐Molino, D., Fumagalli, M., Guschanski, K., Lorenzen, E., Malaspinas, A-S., Marques-Bonet, T., Martin, M. D., Murray, G., Papadopulos, A. S. T., Therkildsen, N. O., Wegmann, D., Dalén, L. & Foote, A., Apr 2020, In: Evolution Letters. 4, 2, p. 94-108 15 p.

    Research output: Contribution to journalReview articlepeer-review

  10. Published

    Initial sequencing and analysis of the human genome

    International Human Genome Sequencing Consortium & Smith, A., 15 Feb 2001, In: Nature. 409, 6822, p. 860-921

    Research output: Contribution to journalReview articlepeer-review

  11. Published

    Lakes in Hot Water: The Impacts of a Changing Climate on Aquatic Ecosystems

    Woolway, R. I., Sharma, S. & Smol, J. P., 30 Oct 2022, In: BioScience. 72, 11, p. 1050-1061 12 p.

    Research output: Contribution to journalReview articlepeer-review

  12. Published

    Madagascar's extraordinary biodiversity: Threats and opportunities

    Ralimanana, H., Perrigo, A. L., Smith, R. J., Borrell, J. S., Faurby, S., Rajaonah, M. T., Randriamboavonjy, T., Vorontsova, M. S., Cooke, R. S. C., Phelps, L. N., Sayol, F., Andela, N., Andermann, T., Andriamanohera, A. M., Andriambololonera, S., Bachman, S. P., Bacon, C. D., Baker, W. J., Belluardo, F., Birkinshaw, C., Cable, S., Canales, N. A., Carrillo, J. D., Clegg, R., Clubbe, C., Crottini, A., Damasco, G., Dhanda, S., Edler, D., Farooq, H., de Lima Ferreira, P., Fisher, B. L., Forest, F., Gardiner, L. M., Goodman, S. M., Grace, O. M., Guedes, T. B., Hackel, J., Henniges, M. C., Hill, R., Lehmann, C. E. R., Lowry, P. P., Marline, L., Matos-Maraví, P., Moat, J., Neves, B., Nogueira, M. G. C., Onstein, R. E., Papadopulos, A. S. T., Perez-Escobar, O. A., Phillipson, P. B., Pironon, S., Przelomska, N. A. S., Rabarimanarivo, M., Rabehevitra, D., Raharimampionona, J., Rajaonary, F., Rajaovelona, L. R., Rakotoarinivo, M., Rakotoarisoa, A. A., Rakotoarisoa, S. E., Rakotomalala, H. N., Rakotonasolo, F., Ralaiveloarisoa, B. A., Ramirez-Herranz, M., Randriamamonjy, J. E. N., Randrianasolo, V., Rasolohery, A., Ratsifandrihamanana, A. N., Ravololomanana, N., Razafiniary, V., Razanajatovo, H., Razanatsoa, E., Rivers, M., Silvestro, D., Testo, W., Torres Jiménez, M. F., Walker, K., Walker, B. E., Wilkin, P., Williams, J., Ziegler, T., Zizka, A. & Antonelli, A., 2 Dec 2022, In: Science. 378, 6623, eadf1466.

    Research output: Contribution to journalReview articlepeer-review

  13. Published

    Methods to study organogenesis in decapod crustacean larvae. I. larval rearing, preparation, and fixation

    Torres, G., Melzer, R. R., Spitzner, F., Šargač, Z., Harzsch, S. & Gimenez Noya, L., 2 Jun 2021, In: Helgoland Marine Research. 75, 1, 3.

    Research output: Contribution to journalReview articlepeer-review

  14. Published

    Microbiomes in extremely acidic environments: functionalities and interactions that allow survival and growth of prokaryotes at low pH

    Quatrini, R. & Johnson, D. B., Jun 2018, In: Current Opinion in Microbiology. 43, p. 139-147 9 p.

    Research output: Contribution to journalReview articlepeer-review

  15. Published

    Microplastics as an emerging threat to plant and soil health in agroecosystems

    Zhou, J., Wen, Y., Marshall, M. R., Zhao, J., Gui, H., Yang, Y., Zeng, Z., Jones, D. L. & Zang, H., 15 Sept 2021, In: Science of the Total Environment. 787, 147444.

    Research output: Contribution to journalReview articlepeer-review

  16. Published

    Moving towards improved surveillance and earlier diagnosis of aquatic pathogens: from traditional methods to emerging technologies

    MacAulay, S., Ellison, A., Kille, P. & Cable, J., Sept 2022, In: Reviews in Aquaculture. 14, 4, p. 1813-1829 17 p.

    Research output: Contribution to journalReview articlepeer-review

  17. Published

    Nutrient stripping: the global disparity between food security and soil nutrient stocks

    Jones, D. L., Cross, P., Withers, P., DeLuca, T., Quilliam, R., Harris, I., Chadwick, D. & Edwards-Jones, G., 8 May 2013, In: Journal of Applied Ecology. 50, p. 851-862

    Research output: Contribution to journalReview articlepeer-review

  18. Published

    On Robust Synchronization of Nonlinear Systems with Application to Grid Integration of Renewable Energy Sources

    Ahmed, H., Ushirobira, R. & Efimov, D., 7 Dec 2021, In: Annual Reviews in Control. 52, p. 213-221

    Research output: Contribution to journalReview articlepeer-review

  19. Published

    One Health: Circadian Medicine Benefits Both Non-human Animals and Humans Alike

    Farag, H., Murphy, B., Templeman, J., Hanlon, C., Joshua, J., Koch, T., Niel, L., Shoveller, A., Bedecarrats, G., Ellison, A., Wilcockson, D. & Martino, T., 20 Feb 2024, In: Journal of Biological Rhythms.

    Research output: Contribution to journalReview articlepeer-review

  20. Published

    Organic acids in the rhizosphere - a critical review

    Jones, D. L., 30 Aug 1998, In: Plant and Soil. 205, 1, p. 25-44

    Research output: Contribution to journalReview articlepeer-review

  21. Published

    Over 50 years of behavioural evidence on the magnetic sense in animals: what has been learnt and how?

    Schneider, W., Holland, R. & Lindecke, O., Mar 2023, In: The European Physical Journal Special Topics. 232, 2, p. 269-278 10 p.

    Research output: Contribution to journalReview articlepeer-review

  22. Published

    Paddy soils have a much higher microbial biomass content than upland soils: A review of the origin, mechanisms, and drivers

    Wei, L., Ge, T., Zhu, Z., Ye, R., Penuelas, J., Li, Y., Lynn, T. M., Jones, D. L., Wu, J. & Kuzyakov, Y., 1 Mar 2022, In: Agriculture, Ecosystems and Environment. 326

    Research output: Contribution to journalReview articlepeer-review

  23. Published

    ParaHox cluster evolution--hagfish and beyond

    Furlong, R. F. & Mulley, J. F., 25 Oct 2008, In: Zoological Science. 25, 10, p. 955-9 5 p.

    Research output: Contribution to journalReview articlepeer-review

  24. Published

    Potential sources and occurrence of macro-plastics and microplastics pollution in farmland soils: A typical case of China

    Ren, S., Wang, K., Zhang, J., Li, J., Zhang, H., Qi, R., Xu, W., Yan, C., Liu, X., Zhang, F., Jones, D. L. & Chadwick, D. R., 2 Apr 2024, In: Critical Reviews in Environmental Science and Technology. 54, 7, p. 533-556 33 p.

    Research output: Contribution to journalReview articlepeer-review

  25. Published

    Principles and patterns of bat movements: From aerodynamics to ecology

    Voigt, C. C., Frick, W., Holland, R., Holdereid, M., Kerth, G., Mello, M., Plowright, R., Swartz, S. & Yovel, Y., Sept 2017, In: Quarterly Review of Biology. 92, 3, p. 267-287 20 p.

    Research output: Contribution to journalReview articlepeer-review

  26. Published

    Priorities to inform research on marine plastic pollution in Southeast Asia

    Omeyer, L. C. M., Duncan, E. M., Aiemsomboon, K., Beaumont, N., Bureekul, S., Cao, B., Carrasco, L. R., Chavanich, S., Clark, J., Cordova, M. R., Couceiro, F., Cragg, S. M., Dickson, N., Frailler, P., Ferraro, G., Fletcher, S., Fong, J., Ford, A., Guttierrez, T., Hamid, F. S., Hiddink, J. G., Hoa, P. T., Holland, S. L., Jones, L., Jones, N., Koldewey, H., Lauro, F. M., Lee, C., Lewis, M., Marks, D., Matallana-Surget, S., Mayorga-Adame, C. G., McGeehan, J., Fesser, L., Michie, L., Miller, M. A., Mohamad, Z. F., Nor, N. H. M., Muller, M., Neill, S., Nelms, S. E., Onda, D. F., Ong, J. J. L., Pariatamby, A., Phang, S. C., Quiliam, R., Robins, P., Salta, M., Sartimbul, A., Shakuto, S., Skov, M., Taboada, E. B., Todd, P. A., Toh, T. C., Valiyaveettil, S., Viyakran, V., Wonnapinij, P., Wood, L. E., Yong, C. L. X. & Godley, B. J., 1 Oct 2022, In: Science of the Total Environment. 841, 156704.

    Research output: Contribution to journalReview articlepeer-review

  27. Published

    Progress on improving Agricultural Nitrogen use efficiency: UK-China viortual joint centers on Nitrogen Agronomy

    Misselbrook, T., Bai, Z., Cai, Z., Cao, W., Carswell, A., Cowan, N., Cui, Z., Chadwick, D. R., Emmett, B., Goulding, K., Jiang, R., Jones, D. L., Ju, X., Liu, H., Lu, Y., Ma, L., Powlson, D., Rees, R. M., Skiba, U., Smith, P., Sylvester-Bradley, R., Williams, J., Wu, L., Xu, M., Xu, W., Zhang, F., Zhang, J., Zhou, J. & Liu, X., 1 Sept 2022, In: Frontiers of Agricultural Science and Engineering. 9, 3, p. 475-489

    Research output: Contribution to journalReview articlepeer-review

  28. Published

    Recent Approaches to Design and Analysis of Electrical Impedance Systems for Single Cells using Machine Learning

    Ferguson, C., Zhang, Y., Palego, C. & Cheng, X., 28 Jun 2023, In: Sensors. 23, 13

    Research output: Contribution to journalReview articlepeer-review

  29. Published

    Recent advances in crystalline oxidopolyborate complexes of d-block or p-block metals: structural aspects, syntheses and physical properties

    Xin, S-S., Zhou, M-H., Beckett, M. & Pan, C-Y., 22 Jun 2021, In: Molecules. 26, 13, 15 p., 3815.

    Research output: Contribution to journalReview articlepeer-review

  30. Published

    Regulation of posterior Hox genes by sex steroids explains vertebral variation in inbred mouse strains

    Mulley, J., Apr 2022, In: Journal of Anatomy. 240, 4, p. 735-745 11 p.

    Research output: Contribution to journalReview articlepeer-review

  31. Published

    Responsible agriculture must adapt to the wetland character of mid-latitude peatlands

    Freeman, B. W. J., Evans, C. D., Musarika, S., Morrison, R., Newman, T. R., Page, S. E., Wiggs, G. F. S., Bell, N. G. A., Styles, D., Wen, Y., Chadwick, D. R. & Jones, D. L., 1 Jun 2022, In: Global Change Biology. 28, 12, p. 3795-3811 17 p.

    Research output: Contribution to journalReview articlepeer-review

  32. Published

    Rol' Bacillus thuringiensis v prirodnykh biotsenozakh

    Golovko, A. E., Golyshin, P. N. & Riabchenko, N. F., 1 May 1993, In: Mikrobiologicheskii zhurnal. 55, 3, p. 104-10 7 p.

    Research output: Contribution to journalReview articlepeer-review

  33. Published

    Role of forested land for natural flood management in the UK: A review

    Cooper, M., Patil, S., Nisbet, T., Thomas, H., Smith, A. & McDonald, M., Sept 2021, In: Wiley Interdisciplinary Reviews: Water. 8, 5, e1541.

    Research output: Contribution to journalReview articlepeer-review

  34. Published

    Scaling up agroforestry requires research 'in' rather than 'for' development

    Coe, R., Sinclair, F. & Barrios, E., Feb 2014, In: Current Opinion in Environmental Sustainability. 6, p. 73-77

    Research output: Contribution to journalReview articlepeer-review

  35. Published

    Shedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19

    Jones, D. L., Baluja, M. Q., Graham, D. W., Corbishley, A., McDonald, J. E., Malham, S. K., Hillary, L. S., Connor, T. R., Gaze, W. H., Moura, I. B., Wilcox, M. H. & Farkas, K., 20 Dec 2020, In: Science of the Total Environment. 749, 141364.

    Research output: Contribution to journalReview articlepeer-review

  36. Published

    Soil microbial biomass-Interpretation and consideration for soil monitoring

    Gonzalez-Quinones, V., Stockdale, E. A., Banning, N. C., Hoyle, F. C., Sawada, Y., Wherrett, A. D., Jones, D. L. & Murphy, D. V., 19 May 2011, In: Soil & Tillage Research. 49, 4, p. 287-304

    Research output: Contribution to journalReview articlepeer-review

  37. Published

    Standardizing Ecosystem Morphological Traits from 3D Information Sources

    Valbuena, R., O'Connor, B., Zellweger, F., Simonson, W., Vihervaara, P., Maltamo, M., Silva, C. A., Almeida, D. R. A., Danks, F., Morsdorf, F., Chirici, G., Lucas, R., Coomes, D. A. & Coops, N. C., 1 Aug 2020, In: Trends in Ecology and Evolution. 35, 8, p. 656-667

    Research output: Contribution to journalReview articlepeer-review

  38. Published

    Storm impacts on phytoplankton community dynamics in lakes

    Stockwell, J. D., Doubek, J. P., Adrian, R., Anneville, O., Carey, C. C., Carvalho, L., Domis, L. N. D. S., Dur, G., Frassl, M. A., Grossart, H-P., Ibelings, B. W., Lajeunesse, M. J., Lewandowska, A. M., Llames, M. E., Matsuzaki, S-I. S., Nodine, E. R., Noges, P., Patil, V. P., Pomati, F., Rinke, K., Rudstam, L. G., Rusak, J. A., Salmaso, N., Seltmann, C. T., Straile, D., Thackeray, S. J., Thiery, W., Urrutia-Cordero, P., Venail, P., Verburg, P., Woolway, R. I., Zohary, T., Andersen, M. R., Bhattacharya, R., Hejzlar, J., Janatian, N., Kpodonu, A. T. N. K., Williamson, T. J. & Wilson, H. L., 1 May 2020, In: Global Change Biology. 26, 5, p. 2756-2784

    Research output: Contribution to journalReview articlepeer-review

  39. Published

    Strategies for sample labelling and library preparation in DNA metabarcoding studies

    Bohmann, K., Elbrecht, V., Caroe, C., Bista, I., Leese, F., Bunce, M., Yu, D. W., Seymour, M., Dumbrell, A. & Creer, S., May 2022, In: Molecular Ecology Resources. 22, 4, p. 1231-1246 16 p.

    Research output: Contribution to journalReview articlepeer-review

  40. Published

    Stress in the social context: a behavioural and eco-evolutionary perspective

    MacLeod, K., English, S., Ruuskanen, S. & Taborsky, B., 1 Aug 2023, In: Journal of Experimental Biology. 226, 15, jeb245829.

    Research output: Contribution to journalReview articlepeer-review

  41. Published

    Subclinical infection and asymptomatic carriage of gastrointestinal zoonoses: occupational exposure, environmental pathways, and the anonymous spread of disease

    Quilliam, R. S., Cross, P., Williams, A. P., Edwards-Jones, G., Salmon, R. L., Rigby, D., Chalmers, R. M., Thomas, D. R. & Jones, D. L., 1 Oct 2013, In: Epidemiology and Infection. 141, 10, p. 2011-2021

    Research output: Contribution to journalReview articlepeer-review

  42. Published

    Systems approaches to microbial communities and their functioning

    Röling, W. F. M., Ferrer, M. & Golyshin, P. N., Aug 2010, In: Current Opinion in Biotechnology. 21, 4, p. 532-8 7 p.

    Research output: Contribution to journalReview articlepeer-review

  43. Published

    The Evolution of Large Testes: Sperm Competition or Male Mating Rate?

    Vahed, K. & Parker, D. J., 1 Feb 2012, In: Ethology. 118, 2, p. 107-117

    Research output: Contribution to journalReview articlepeer-review

  44. Published

    The Tides They Are A-Changin': A Comprehensive Review of Past and Future Nonastronomical Changes in Tides, Their Driving Mechanisms, and Future Implications: A comprehensive review of past and future non‐astronomical changes in tides, their driving mechanisms and future implications

    Haigh, I. D., Pickering, M. D., Green, J. A. M., Arbic, B. K., Arns, A., Dangendorf, S., Hill, D. F., Horsburgh, K., Howard, T., Idier, D., Jay, D. A., Jaenicke, L., Lee, S. B., Mueller, M., Schindelegger, M., Talke, S. A., Wilmes, S-B. & Woodworth, P. L., Mar 2020, In: Reviews of Geophysics. 58, 1, e2018RG000636.

    Research output: Contribution to journalReview articlepeer-review

  45. Published

    The iron-oxidizing proteobacteria

    Hedrich, S., Schlömann, M. & Johnson, D. B., Jun 2011, In: Microbiology - SGM. 157, Pt 6, p. 1551-1564 14 p.

    Research output: Contribution to journalReview articlepeer-review

  46. Published

    The long-term uncertainty of biodegradable mulch film residues and associated microplastics pollution on plant-soil health

    Zhou, J., Jia, R., Brown, R. W., Yang, Y., Zeng, Z., Jones, D. L. & Zang, H., 15 Jan 2023, In: Journal of Hazardous Materials. 442, 130055.

    Research output: Contribution to journalReview articlepeer-review

  47. E-pub ahead of print

    The power of citizen science to advance fungal conservation

    Haelewaters, D., Quandt, C. A., Bartrop, L., Cazabonne, J., Crockatt, M. E., Cunha, S. P., De Lange, R., Dominici, L., Douglas, B., Drechsler-Santos, E. R., Heilmann-Clausen, J., Irga, P. J., Jakob, S., Lofgren, L., Martin, T. E., Muchane, M. N., Stallman, J. K., Verbeken, A., Walker, A. K. & Gonçalves, S. C., 22 Mar 2024, (E-pub ahead of print) In: Conservation Letters. n/a, n/a, p. e13013

    Research output: Contribution to journalReview articlepeer-review

  48. Published

    Thermal sensitivity across forest vertical profiles: patterns, mechanisms, and ecological implications

    Vinod, N., Slot, M., McGregor, I., Ordway, E., Smith, M., Taylor, T. C., Sack, L., Buckley, T. & Anderson-Teixeira, K., 1 Jan 2023, In: New Phytologist. 237, 1, p. 22-47

    Research output: Contribution to journalReview articlepeer-review

  49. Published

    Toward improved impact evaluation of community forest management in Indonesia

    Meijaard, E., Santika, T., Wilson, K. A., Budiharta, S., Kusworo, A., Law, E. A., Friedman, R., Hutabarat, J. A., Indrawan, T. P., St John, F. A. V. & Struebig, M., Jan 2021, In: Conservation Science and Practice. 3, 1, e2189.

    Research output: Contribution to journalReview articlepeer-review

  50. Published

    Toxic habits: an analysis of general trends and biases in snake venom research

    Avella, I., Wüster, W., Luiselli, L. & Martínez-Freiría, F., 17 Dec 2022, In: Toxins. 14, 12, p. 884 17 p., 884.

    Research output: Contribution to journalReview articlepeer-review

  51. Published

    Urban heat mitigation by green and blue infrastructure: Drivers, effectiveness, and future needs

    Kumar, P., Debele, S. E., Khalili, S., Halios, C. H., Sahani, J., Aghamohammadi, N., Andrade, M. D. F., Athanassiadou, M., Bhui, K., Calvillo, N., Cao, S-J., Coulon, F., Edmondson, J. L., Fletcher, D., Dias de Freitas, E., Guo, H., Hort, M. C., Katti, M., Kjeldsen, T. R., Lehmann, S., Locosselli, G. M., Malham, S. K., Morawska, L., Parajuli, R., Rogers, C. D. F., Yao, R., Wang, F., Wenk, J. & Jones, L., 4 Mar 2024, In: The Innovation. 5, 2, p. 100588

    Research output: Contribution to journalReview articlepeer-review