1. 2021
2. Published

   Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions

   Moya-Beltrán, A., Beard, S., Rojas-Villalobos, C., Issotta, F., Gallardo, Y., Ulloa, R., Giaveno, A., Degli Esposti, M., Johnson, D. B. & Quatrini, R., Nov 2021, In: The ISME Journal. 15, 11, p. 3221-3238

   Research output: Contribution to journal › Article › peer-review

3. Published

   Livestock-induced N2O emissions may limit the benefits of converting cropland to grazed grassland as a greenhouse gas mitigation strategy for agricultural peatlands

   Wen, Y., Freeman, B., Hunt, D., Musarika, S., Zang, H., Marsden, K. A., Evans, C. D., Chadwick, D. R. & Jones, D. L., Nov 2021, In: Resources, Conservation and Recycling. 174, 105764.

   Research output: Contribution to journal › Article › peer-review

4. Published

   Map of total phosphorus content in native soils of Brazil

   Pavinato, P. S., Rocha, G. C., Cherubin, M. R., Harris, I., Jones, D. L. & Withers, P. J. A., Nov 2021, In: Scientia Agricola. 78, 6

   Research output: Contribution to journal › Article › peer-review

5. Published

   On pedagogy of a Soil Science Centre for Doctoral Training

   Haygarth, P. M., Lawrenson, O., Mezeli, M., Sayer, E. J., McCloskey, C. S., Evans, D. L., Kirk, G. J. D., Tye, A. M., Chadwick, D. R., McGrath, S. P., Mooney, S. J., Paterson, E., Robinson, D. A. & Jones, D. L., Nov 2021, In: European Journal of Soil Science. 72, 6, p. 2320-2329

   Research output: Contribution to journal › Article › peer-review

6. Published

   Rare morph Lake Malawi mbuna cichlids benefit from reduced aggression from con- and hetero-specifics

   Tyers, A. M., Cooke, G. M. & Turner, G. F., Nov 2021, In: Journal of Evolutionary Biology. 34, 11, p. 1678-1690 13 p.

   Research output: Contribution to journal › Article › peer-review

7. Published

   River sediment geochemistry and provenance following the Mount Polley mine tailings spill, Canada: the role of hydraulic sorting and sediment dilution processes in contaminant dispersal and remediation

   Bird, G., Hudson-Edwards, K., Byrne, P., Macklin, M., Brewer, P. & Williams, R., Nov 2021, In: Applied Geochemistry. 134, 11 p., 105086.

   Research output: Contribution to journal › Article › peer-review

8. Published

   Soil health cluster analysis based on national monitoring of soil indicators

   Seaton, F. M., Barrett, G., Burden, A., Creer, S., Fitos, E., Garbutt, A., Griffiths, R. I., Henrys, P., Jones, D. L., Keenan, P., Keith, A., Lebron, I., Maskell, L., Pereira, M. G., Reinsch, S., Smart, S. M., Williams, B., Emmett, B. A. & Robinson, D. A., Nov 2021, In: European Journal of Soil Science. 72, 6, p. 2414-2429 16 p.

   Research output: Contribution to journal › Article › peer-review

9. Published

   Structural and biochemical insights into CRISPR RNA processing by the Cas5c ribonuclease SMU1763 from Streptococcus mutans

   Lemak, S., Serbanescu, M. A., Khusnutdinova, A. N., Ruszkowski, M., Beloglazova, N., Xu, X., Brown, G., Cui, H., Tan, K., Joachimiak, A., Cvitkovitch, D. G., Savchenko, A. & Yakunin, A., Nov 2021, In: Journal of Biological Chemistry. 297, 5, 101251.

   Research output: Contribution to journal › Article › peer-review

10. Published

    Substrate control of sulphur utilisation and microbial stoichiometry in soil: Results of 13C, 15N, 14C, and 35S quad labelling

    Ma, Q., Kuzyakov, Y., Pan, W., Tang, S., Chadwick, D. R., Wen, Y., Hill, P. W., Macdonald, A., Ge, T., Si, L., Wu, L. & Jones, D. L., Nov 2021, In: The ISME Journal. 15, 11, p. 3148-3158 11 p.

    Research output: Contribution to journal › Article › peer-review

11. Published

    The late pleistocene cave bear fauna of the Torrener Bärenhöhle in the northern alps (Salzburg, Austria)

    Doppes, D., Alberti, F., Barlow, A., Krutter, S., FRiedrich, R., Hofreiter, M., Lindauer, S., Kavcik-Graumann, N., Rosendahl, W. & Rabeder, G., Nov 2021, In: Historical Biology. 31, 4, p. 422-428

    Research output: Contribution to journal › Article › peer-review

12. Published

    Contrasting selection pressure on body and weapon size in a polygynous megaherbivore

    Shannon, G., Sadler, P., Smith, J., Roylance-Casson, E. & Cordes, L., 31 Oct 2021, In: Biology Letters. 17, 10

    Research output: Contribution to journal › Article › peer-review

13. Published

    Integration of 5.8GHz Doppler Radar and Machine Learning for Automated Honeybee Hive Surveillance and Logging

    Aldabashi, N., Williams, S., Eltokhy, A., Palmer, E., Cross, P. & Palego, C., 27 Oct 2021, 2021 IEEE MTT-S International Microwave Symposium (IMS). IEEE

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

14. Published

    Phenoloxidase activity and organic carbon dynamics in historic Anthrosols in Scotland, UK

    Esiana, B. O. I., Coates, C. J., Adderley, W. P., Berns, A. E. & Bol, R., 27 Oct 2021, In: PLoS ONE. 16, 10, e0259205.

    Research output: Contribution to journal › Article › peer-review

15. Published

    Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins

    Marie, L., Marco, G., Frederick, A., Simon, B., Andrew, B., Ramon, F., Milaja, N., Joanne, OB., M., R. K., E., R. P., Benoit, S-B., Daniel, W., C., F. M., D., F. A. & E., G. O., 27 Oct 2021, In: Science Advances. 7, 44, eabg1245.

    Research output: Contribution to journal › Article › peer-review

16. Published

    A multispecies BCO2 beak color polymorphism in the Darwin’s finch radiation

    Enbody, E., Sprehn, C. G., Abzhanov, A., Bi, H., Dobreva, M. P., Osborne, O., Rubin, C-J., Grant, P., Grant, B. R. & Andersson, L., 22 Oct 2021, In: Current Biology. 31, 24, p. 5597-5604

    Research output: Contribution to journal › Article › peer-review

17. Published

    Identification and predictability of soil quality indicators from conventional soil and vegetation classifications

    Simfukwe, P., Hill, P. W., Emmett, B. A. & Jones, D. L., 22 Oct 2021, In: PLoS ONE. 16, 10, e0248665.

    Research output: Contribution to journal › Article › peer-review

18. Published

    Ancient Mitogenomes Provide New Insights into the Origin and Early Introduction of Chinese Domestic Donkeys

    Wang, L., Sheng, G., Preick, M., Hu, S., Deng, T., Taron, U. H., Barlow, A., Hu, J., Xiao, B., Sun, G., Song, S., Hou, X., Lai, X., Hofreiter, M. & Yuan, J., 15 Oct 2021, In: Frontiers in Genetics.

    Research output: Contribution to journal › Article › peer-review

19. Published

    Divergent responses of wetland methane emissions to elevated atmospheric CO2 dependent on water table

    Lin, Y., Yuan, J., Liu, D., Kang, H., Freeman, C., Hu, H-W., Ye, G. & Ding, W., 15 Oct 2021, In: Water Research. 205, 117682.

    Research output: Contribution to journal › Article › peer-review

20. Published

    Evolution of Type IV CRISPR-Cas Systems: Insights from CRISPR Loci in Integrative Conjugative Elements of Acidithiobacillia

    Moya-Beltrán, A., Makarova, K. S., Acuna, L. G., Wolf, Y., Covarrubias, P. C., Shmakov, S. A., Silva, C., Tolstoy, I., Johnson, B., Koonin, E. V. & Quatrini, R., 15 Oct 2021, In: The CRISPR Journal. 4, 5, p. 656-672

    Research output: Contribution to journal › Article › peer-review

21. Published

    What is the deal with the Green Deal: Will the new strategy help to improve European freshwater quality beyond the Water Framework Directive?

    Bierova, M., Glendell, M. & Bol, R., 15 Oct 2021, In: Science of the Total Environment. 791, 148080.

    Research output: Contribution to journal › Article › peer-review

22. Published

    Wood Modification with Phenol Formaldehyde Resin and its Influence on the Dimensional Stability of Homegrown and Imported Hardwoods

    Kupfernagel, C., Spear, M., Pitman, A. & Ormondroyd, G., 14 Oct 2021, p. 12-15. 4 p.

    Research output: Contribution to conference › Paper

23. Published

    We used 60-year-old notebooks to find out why male hippos have bigger tusks than females

    Shannon, G., 8 Oct 2021, The Conversation.

    Research output: Contribution to specialist publication › Article

24. Published

    Mapping epigenetic divergence in the massive radiation of Lake Malawi cichlid fishes

    Vernaz, G., Malinsky, M., Svardal, H., Du, M., Tyers, A. M., Santos, M. E., Durbin, R., Genner, M. J., Turner, G. F. & Miska, E. A., 7 Oct 2021, In: Nature Communications. 12, 1, 5870.

    Research output: Contribution to journal › Article › peer-review

25. Published

    Tapping into non-English-language science for the conservation of global biodiversity

    Amano, T., Berdejo-Espinola, V., Christie, A. P., Willott, K., Akasaka, M., Baldi, A., Berthinussen, A., Bertolino, S., Bladon, A. J., Chen, M., Choi, C-Y., Kharrat, M. B. D., de Oliveira, L. G., Farhat, P., Golivets, M., Aranzamendi, N. H., Jantke, K., Kajzer-Bonk, J., Aytekin, M. C. K., Khorozyan, I., Kito, K., Konno, K., Lin, D-L., Littlewood, N., Liu, Y., Liu, Y., Loretto, M-C., Martin, P. A., Morgan, W. H., Narvaez-Gomez, J. P., Negret, P. J., Nourani, E., Ocoa Quintero, J. M., Ockendon, N., Oh, R. R. Y., Piovezan-Borges, A. C., Pollet, I. L., Ramos, D. L., Segovia, A. L. R., Rivera-Villanueva, A. N., Rocha, R., Rouyer, M-M., Sainsbury, K. A., Schuster, R., Schwab, D., Sekercioglu, C. H., Seo, H-M., Shackelford, G., Shinoda, Y., Smith, R. K., Tao, S., Tsai, M., Tyler, E. H. M., Vajna, F., Valdebenito, J. O., Vozykova, S., Waryszak, P., Zamora-Gutierrez, V., Zenni, R. D., Zhou, W. & Sutherland, W. J., 7 Oct 2021, In: PLoS Biology. 19, 10, e3001296.

    Research output: Contribution to journal › Article › peer-review

26. Published

    Molecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China

    Shi, J-S., Liu, J-C., Giri, R., Owens, J. B., Santra, V., Kuttalam, S. R., Selvan, M., Guo, K-J. & Malhotra, A., 4 Oct 2021, In: ZooKeys. 1061, 1061, p. 87-108 22 p.

    Research output: Contribution to journal › Article › peer-review

27. Published

    Investigating heterogeneity in food risk perceptions using best-worst scaling

    Millman, C., Rigby, D. & Jones, D. L., 3 Oct 2021, In: Journal of Risk Research. 24, 10, p. 1288-1303 16 p.

    Research output: Contribution to journal › Article › peer-review

28. Published

    Manipulation of the soil microbiome regulates the colonization of plants by arbuscular mycorrhizal fungi

    Arruda, B., George, P. B. L., Robin, A., de L C Mescolotti, D., Herrera, W. F. B., Jones, D. L. & Andreote, F. D., 1 Oct 2021, In: Mycorrhiza. 31, 5, p. 545-558 14 p.

    Research output: Contribution to journal › Article › peer-review

29. Published

    Reducing household greenhouse gas emissions from space and water heating through low-carbon technology: identifying cost-effective approaches

    Rafique, A. & Williams, P., 1 Oct 2021, In: Energy and Buildings. 248, 11162.

    Research output: Contribution to journal › Article › peer-review

30. Published

    Successful application of ancient DNA extraction and library construction protocols to museum wet collection specimens

    Straube, N., Lyra, M., Paijmans, J., Preick, M., Basler, N., Penner, J., Rodel, M-O., Westbury, M. V., Haddad, C. F. B., Barlow, A. & Hofreiter, M., 1 Oct 2021, In: Molecular Ecology Resources.

    Research output: Contribution to journal › Article › peer-review

31. Published

    Unusual posture of a male northern viper Vipera berus – a more efficient way to bask?

    Pozzi, A. & Limia Russel, G., 1 Oct 2021, In: Herpetological Bulletin. 157, p. 42-43

    Research output: Contribution to journal › Article › peer-review

32. Published

    Addition of base cations increases microbial carbon use efficiency and biomass in acidic soils

    Horn, E. L., Cooledge, E., Jones, D. L., Hoyle, F. C., Brailsford, F. L. & Murphy, D. V., Oct 2021, In: Soil Biology and Biochemistry. 161, 108392.

    Research output: Contribution to journal › Article › peer-review

33. Published

    Comparative life cycle assessment of plant and beef-based patties, including carbon opportunity costs

    Saget, S., Porto Costa, M., Santos, C. S., Vasconcelos, M., Styles, D. & Williams, M., Oct 2021, In: Sustainable Production and Consumption. 28, p. 936-952 17 p.

    Research output: Contribution to journal › Article › peer-review

34. Published

    Increased mortality of tropical tree seedlings during the extreme 2015-16 El Niño

    Browne, L., Markesteijn, L., Engelbrecht, B. M. J., Jones, F. A., Lewis, O. T., Manzané-Pinzón, E., Wright, S. J. & Comita, L. S., Oct 2021, In: Global Change Biology. 27, 20, p. 5043-5053

    Research output: Contribution to journal › Article › peer-review

35. Published

    Molecular Clocks and Archeogenomics of a Late Period Egyptian Date Palm Leaf Reveal Introgression from Wild Relatives and Add Timestamps on the Domestication

    Pérez-Escobar, O. A., Bellott, S., Przelomska, N. A. S., Flowers, J. M., Nesbitt, M., Ryan, P., Gutaker, R. M., Gros-Balthazard, M., Wells, T., Kuhnhäuser, B. G., Schley, R., Bogarin, D., Dodsworth, S., Diaz, R., Lehmann, M., Petoe, P., Eiserhardt, W. L., Preick, M., Hofreiter, M., Hajdas, I., Purugganan, M., Antonelli, A., Gravendeel, B., Leitch, I. J., Jimenez, M. F. T., Papadopulos, A. S. T., Chomicki, G., Renner, S. S. & Baker, W. J., Oct 2021, In: Molecular Biology and Evolution. 38, 10, p. 4475-4492 18 p., msab188.

    Research output: Contribution to journal › Article › peer-review

36. Published

    Monitoring restored tropical forest diversity and structure through UAV-borne hyperspectral and lidar fusion

    Almeida, D. R. A. D., Broadbent, E. N., Ferreira, M. P., Meli, P., Zambrano, A. M. A., Gorgens, E. B., Resende, A. F., Almeida, C. T. D., Amaral, C. H. D., Corte, A. P. D., Silva, C. A., Romanelli, J. P., Prata, G. A., Papa, D. D. A., Stark, S. C., Valbuena, R., Nelson, B. W., Guillemot, J., Féret, J-B., Chazdon, R. & Brancalion, P. H. S., Oct 2021, In: Remote Sensing of Environment. 264, 1 p., 112582.

    Research output: Contribution to journal › Article › peer-review

37. Published

    Taking the steps toward sustainable livestock: our multidisciplinary global farm platform journey

    Rivero, M. J., Evans, A., Berndt, A., Cartmill, A., Dowsey, A., Farruggia, A., Mignolet, C., Enriquez-Hidalgo, D., Chadwick, D., McCracken, D., Busch, D., Pereyra, F., Martin, G. B., Sanford, G. R., Sheridan, H., Wright, I., Brunet, L., Eisler, M., Lopez-Villalobos, N., Rovira, P., Harris, P., Murphy, P., Williams, P., Jackson, R. D., Machado, R., Suraj, P. T., Puech, T., Boland, T., Ayala, W. & Lee, M. R. F., Oct 2021, In: Animal Frontiers. 11, 5, p. 52-58 7 p.

    Research output: Contribution to journal › Article › peer-review

38. Published

    DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna

    Gielings, R., Fais, M., Fontaneto, D., Creer, S., Costa, F. O., Renema, W. & Macher, J-N., 30 Sept 2021, In: Frontiers in Marine Science.

    Research output: Contribution to journal › Article › peer-review

39. Published

    The demographic history of Madagascan micro-endemics: have rare species always been rare?

    Helmstetter, A. J., Cable, S., Rakotonasolo, F., Rabarijaona, R., Rakotoarinivo, M., Eiserhardt, W. L., Baker, W. J. & Papadopulos, A. S. T., 29 Sept 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1959, 20210957.

    Research output: Contribution to journal › Article › peer-review

40. Published

    Domestication-induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (Salmo salar L.)

    Perry, W. B., Kaufmann, J., Solberg, M. F., Brodie, C., Medina, A. M. C., Pillay, K., Egerton, A., Harvey, A., Phillips, K. P., Coughlan, J., Egan, F., Grealis, R., Hutton, S., Leseur, F., Ryan, S., Poole, R., Rogan, G., Ryder, E., Schaal, P., Waters, C., Wynne, R., Taylor, M., Prodohl, P., Creer, S., Llewellyn, M., McGinnity, P., Carvalho, G. & Glover, K. A., 28 Sept 2021, In: Evolutionary Applications. 14, 9, p. 2319-2332 14 p.

    Research output: Contribution to journal › Article › peer-review

41. Published

    Reality of Dreams: Post-Neoliberal Utopias in the Ecuadorian Amazon

    Wilson, J., 28 Sept 2021, Yale University Press.

    Research output: Book/Report › Book › peer-review

42. Published

    Microplastics as an emerging threat to plant and soil health in agroecosystems

    Zhou, J., Wen, Y., Marshall, M. R., Zhao, J., Gui, H., Yang, Y., Zeng, Z., Jones, D. L. & Zang, H., 15 Sept 2021, In: Science of the Total Environment. 787, 147444.

    Research output: Contribution to journal › Review article › peer-review

43. Published

    Tracing the fate of wastewater viruses reveals catchment-scale virome diversity and connectivity

    Adriaenssens, E. M., Farkas, K., McDonald, J. E., Jones, D. L., Allison, H. E. & McCarthy, A. J., 15 Sept 2021, In: Water Research. 203

    Research output: Contribution to journal › Article › peer-review

44. Published

    Shifts in Soil Structure, Biological, and Functional Diversity Under Long-Term Carbon Deprivation

    George, P. B. L., Fidler, D. B., Van Nostrand, J. D., Atkinson, J. A., Mooney, S. J., Creer, S., Griffiths, R. I., McDonald, J. E., Robinson, D. A. & Jones, D. L., 14 Sept 2021, In: Frontiers in Microbiology. 12, 735022.

    Research output: Contribution to journal › Article › peer-review

45. Published

    Emerging threats from deforestation and forest fragmentation in the Wallacea centre of endemism

    Voigt, M., Supriatna, J., Deere, N. J., Kastanya, A., Mitchell, S. L., Rosa, I., Santika, T., Siregar, R., Tasirin, J. S., Widyanto, A., Winarni, N. L., Zakaria, Z., Mumbunan, S., Davies, Z. G. & Struebig, M., 7 Sept 2021, In: Environmental Research Letters. 16, 094048.

    Research output: Contribution to journal › Article › peer-review

46. Published

    Barriers and opportunities facing the UK Peatland Code: a case-study of blended green finance

    Moxey, A., Smith, M-A., Taylor, E. & Williams, P., 1 Sept 2021, In: Land Use Policy. 108, 105594.

    Research output: Contribution to journal › Article › peer-review

47. Published

    Cover crop species and mycorrhizal colonization on soil phosphorus dynamics

    Arruda, B., Herrera, W., Rojas-García, J., Turner, C. & Pavinato, P., 1 Sept 2021, In: Rhizosphere. 19, 100396.

    Research output: Contribution to journal › Article › peer-review

48. Published

    Dependence of thermal desorption method for profiling volatile organic compound (VOC) emissions from soil

    Brown, R. W., Mayser, J. P., Widdowson, C., Chadwick, D. R. & Jones, D. L., 1 Sept 2021, In: Soil Biology and Biochemistry. 160, 108313.

    Research output: Contribution to journal › Article › peer-review

49. Published

    Differential long-term fertilization alters residue-derived labile organic carbon fractions and microbial community during straw residue decomposition

    Ge, Z., Li, S., Bol, R., Zhu, P., Peng, C., An, T., Cheng, N., Liu, X., Li, T., Xu, Z. & Wang, J., 1 Sept 2021, In: Soil & Tillage Research. 213, 105120.

    Research output: Contribution to journal › Article › peer-review

50. Published

    Effects of farmyard manure on soil S cycling: Substrate level exploration of high- and low-molecular weight organic S decomposition

    Ma, Q., Tang, S., Pan, W., Zhou, J., Chadwick, D. R., Hill, P. W., Wu, L. & Jones, D. L., 1 Sept 2021, In: Soil Biology and Biochemistry. 160, 108359.

    Research output: Contribution to journal › Article › peer-review

51. Published

    Fate of low-molecular-weight organic phosphorus compounds in the P-rich and P-poor paddy soils

    LI Bao-zhen, Gunina, A., Zhran, M., Jones, D. L., Hill, P. W., HU Ya-jun, GE Ti-da & WU Jin-shui, 1 Sept 2021, In: Journal of Integrative Agriculture. 20, 9, p. 2526-2534

    Research output: Contribution to journal › Article › peer-review