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  1. Article › Research › Peer-reviewed
  2. Published

    Microbial Communities in Sediments in Acidic, Metal-Rich Mine Lakes: Results from a Study in South-West Spain

    Falagan Rodriguez, C., Sánchez-España, F. J., Yusta, I. & Johnson, D. B., Nov 2015, In: Advanced Materials Research. 1130, p. 7-10

    Research output: Contribution to journalArticlepeer-review

  3. Published

    Microbial Communities of Polymetallic Deposits’ Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts

    Gavrilov, S. N., Korzhenkov, A. A., Kublanov, I. V., Bargiela, R., Zamana, L. V., Toshchakov, S. V., Golyshin, P. & Golyshina, O., 17 Jul 2019, In: Frontiers in Microbiology.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Microbial Diversity in Acidic Anaerobic Sediments at the Geothermal Caviahue-Copahue System, Argentina

    Willis, G., Hedrich, S., Ñancucheo, I., Johnson, D. B. & Donati, E. R., 1 Oct 2013, In: Advanced Materials Research. 825, p. 7-10

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Microbial Diversity of a Disused Copper Mine Site (Parys Mountain, UK), Dominated by Intensive Eukaryotic Filamentous Growth

    Distaso, M., Bargiela, R., Johnson, B., McIntosh, O., Williams, G., Jones, D. L., Golyshin, P. & Golyshina, O., 24 Aug 2022, In: Microorganisms . 10, 9, 1694.

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Microbial activity and nitrogen mineralization in forest mineral soils following heating: evaluation of post-fire effects.

    Choromanska, U. & DeLuca, T. H., 1 Feb 2002, In: Soil Biology and Biochemistry. 34, 2, p. 263-271

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Microbial activity differentially regulates the vertical mobility of nitrogen compounds in soil

    Abaas, E., Hill, P. W., Roberts, P., Murphy, D. V. & Jones, D. L., Oct 2012, In: Soil Biology and Biochemistry. 53, p. 120-123

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Microbial and nutrient pollution of coastal bathing waters in Mauritius.

    Daby, D., Turner, J. R. & Jago, C. F., 1 Feb 2002, In: Environment International. 27, 7, p. 555-566

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Microbial and plant uptake of free amino sugars in grassland soils

    Roberts, P. & Jones, D. L., Jun 2012, In: Soil Biology and Biochemistry. 49, p. 139-149

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Microbial assimilation dynamics differs but total mineralization from added root and shoot residues is similar in agricultural Alfisols

    Xu, Y., Sun, L., Lal, R., Bol, R., Wang, Y., Gao, X., Ding, F., Liang, S., Li, S. & Wang, J., 1 Sept 2020, In: Soil Biology and Biochemistry. 148, 107901.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Microbial biomass, activity, and community structure in horticultural soils under conventional and organic management strategies

    Ge, T., Hunan., C. A. O., Yuan, H., Li, B., Zhu, H., Peng, P., Li, K., Jones, D. L. & Wu, J., 30 Sept 2013, In: European Journal of Soil Biology. 58, p. 122-128

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Microbial communities and geochemical dynamics in an extremely acidic, metal-rich stream at an abandoned sulfide mine (Huelva, Spain) underpinned by two functional primary production systems

    Rowe, O. F., Sanchez-Espana, J., Hallberg, K. & Johnson, D. B., 1 Jul 2007, In: Environmental Microbiology. 9, 7, p. 1761-1771

    Research output: Contribution to journalArticlepeer-review

  13. Microbial communities colonising plastics during transition from the wastewater treatment plant to marine waters

    Tulloch, C. L., Bargiela, R., Williams, G. B., Chernikova, T. N., Cotterell, B. M., Wellington, E. M. H., Christie-Oleza, J., Thomas, D. N., Jones, D. L. & Golyshin, P. N., 29 Apr 2024, In: Environmental Microbiome. 19, 1, 27.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Microbial communities in a porphyry copper tailings impoundment and their impact on the geochemical dynamics of the mine waste

    Diaby, N., Dold, B., Pfeifer, H. R., Holliger, C., Johnson, D. B. & Hallberg, K. B., 1 Feb 2007, In: Environmental Microbiology. 9, 2, p. 298-307

    Research output: Contribution to journalArticlepeer-review

  15. Published

    Microbial community changes in heathland soil communities along a geographical gradient: interaction with climate change manipulations.

    Sowerby, A., Emmett, B., Beier, C., Tietema, A., Penuelas, J., Estiatre, M., Van Meeteren, M. J., Hughes, S. & Freeman, C., 1 Oct 2005, In: Soil Biology and Biochemistry. 37, 10, p. 1805-1813

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Microbial community of a hydrothermal mud vent underneath the deep-sea anoxic brine Lake Urania (eastern Mediterranean).

    Golyshin, P., Yakimov, M. M., Giuliano, L., Cappello, S., Denaro, R. & Golyshin, P. N., 1 Apr 2007, In: Origins of Life and Evolution of Biospheres. 37, 2, p. 177-188

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Microbial community of a saline mud volcano at San Biagio-Belpasso, Mt. Etna (Italy)

    Yakimov, M. M., Giuliano, L., Crisafi, E., Chernikova, T. N., Timmis, K. N. & Golyshin, P. N., 1 May 2002, In: Environmental Microbiology. 4, 5, p. 249-256

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Microbial community of the deep-sea brine Lake Kryos seawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA

    Golyshin, P., Yakimov, M. M., La Cono, V., La Spada, G., Bortoluzzi, G., Messina, E., Smedile, F., Arcadi, E., Borghini, M., Ferrer, M., Schmitt-Kopplin, P., Hertkorn, N., Cray, J. A., Hallsworth, J. E., Golyshin, P. N. & Giuliano, L., 1 Feb 2015, In: Environmental Microbiology. 17, 2, p. 364-382

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Microbial community succession in soil is mainly driven by carbon and nitrogen contents rather than phosphorus and sulphur contents

    Tang, S., Ma, Q., Marsden, K., Chadwick, D., Luo, Y., Kuzyakov, Y., Wu, L. & Jones, D. L., 1 May 2023, In: Soil Biology and Biochemistry. 180, 109019.

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Microbial competition for nitrogen and carbon is as intense in the subsoil as in the topsoil

    Jones, D., Magthab, E., Gleeson, D. B., Hill, P., Sanchez-Rodriguez, A. R., Roberts, P., Ge, T. & Murphy, D. V., Feb 2018, In: Soil Biology and Biochemistry. 117, p. 72-82

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Microbial consortia in mesocosm bioremediation trial using oil sorbents, slow-release fertilizer and bioaugmentation.

    Golyshin, P., Gertler, C., Gerdts, G., Timmis, K. N. & Golyshin, P. N., 1 Aug 2009, In: Fems Microbiology Ecology. 69, 2, p. 288-300

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Microbial contributions to climate change through carbon cycle feedbacks.

    Bardgett, R. D., Freeman, C. & Ostle, N. J., 1 Aug 2008, In: ISME Journal. 2, 8, p. 805-814

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Microbial diversity and activity are increased by compost amendment of metal-contaminated soil.

    Farrell, M., Griffith, G. W., Hobbs, P. J., Perkins, W. T. & Jones, D. L., 1 Jan 2010, In: Fems Microbiology Ecology. 71, 1, p. 94-105

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Microbial diversity and metabolic networks in acid mine drainage habitats

    Mendez-Garcia, C., Pelaez, A. I., Mesa, V., Sanchez, J., Golyshina, O. & Ferrer, M., 29 May 2015, In: Frontiers in Microbiology. 6, p. Article Number 475

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Microbial diversity dynamics during the self-acidification of dairy slurry

    Bastami, M. S., Jones, D. L. & Chadwick, D. R., 16 Jul 2021, In: Environmental Technology. 42, 16, p. 2562-2572 11 p.

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Microbial enzyme activity and stoichiometry signal the effects of agricultural intervention on nutrient cycling in peatlands

    Qin, L., Freeman, C., Jia, X., Zhang, Z., Liu, B., Zhang, S. & Jiang, M., 1 Mar 2021, In: Ecological Indicators. 122, 107242.

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin.

    Ferrer, M., Golyshina, O. V., Chernikova, T. N., Khachane, A. N., Dos Santos, V. A., Yakimov, M. M., Timmis, K. N. & Golyshin, P. N., 1 Aug 2005, In: Chemistry and Biology. 12, 8, p. 895-904

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Microbial generation of sulfuric acid from granular elemental sulfur in laboratory-scale bioreactors

    Pakostova, E. & Johnson, D. B., Dec 2019, In: Hydrometallurgy. 190, 105152.

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation

    Yakimov, M. M., La Cono, V., Slepak, V. Z., La Spada, G., Arcadi, E., Messina, E., Borghini, M., Monticelli, L. S., Rojo, D., Barbas, C., Golyshina, O. V., Ferrer, M., Golyshin, P. N. & Giuliano, L., 19 Dec 2013, In: Scientific Reports. 3, p. 3554

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Microbial metagenomes: moving forward industrial biotechnology.

    Ferrer, M., Beloqui, A. & Golyshin, P. N., 1 May 2007, In: Journal of Chemical Technology and Biotechnology. 82, 5, p. 421-423

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Microbial potential for denitrification in the hyperarid Atacama Desert soils

    Wu, D., Senbayram, M., Moradi, G., Moerchen, R., Knief, C., Klumpp, E., Jones, D. L., Well, R., Chen, R. & Bol, R., 1 Jun 2021, In: Soil Biology and Biochemistry. 157, 108248.

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Microbial poulations in a 110 ton-scale column for the recovery of metals from black schist ores

    Hallberg, K. B., Johnson, D. B., Langwaldt, J. & Joulian, C., 1 Jan 2007, In: Advanced Materials Research. 20-21, p. 170

    Research output: Contribution to journalArticlepeer-review

  33. Published

    Microbial response time to sugar and amino acid additions to soil.

    Jones, D. L. & Murphy, D. V., 1 Aug 2007, In: Soil Biology and Biochemistry. 39, 8, p. 2178-2182

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage

    Mendez-Garcia, C., Mesa, V., Sprenger, R. R., Richter, M., Suarez Diez, M., Solano, J., Bargiela, R., Golyshina, O., Manteca, A., Ramos, J. L., Gallego, J. R., Llorente, I., Ap Martins dos Santos, V., Jensen, O. N., Pelaez, A. I., Sanchez, J. & Ferrer, M., Jun 2014, In: ISME Journal. 8, p. 1259-1274

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Microbial turnover of above and belowground litter components in shrublands

    Marella, V. S., Hill, P., Jones, D. & Roberts, P., Jul 2016, In: Pedobiologia. 59, 4, p. 229-232

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Microbial uptake and utlization of low molecular weight organic substrates in soil depend on carbon oxidation state

    Gunina, A., Smith, A., Jones, D. & Kuzyakov, Y., Mar 2017, In: Biogeochemistry. 133, 1, p. 89-100

    Research output: Contribution to journalArticlepeer-review

  37. Published

    Microbial uptake kinetics of dissolved organic carbon (DOC) compound groups from river water and sediments

    Brailsford, F. L., Glanville, H. C., Golyshin, P. N., Johnes, P. J., Yates, C. A. & Jones, D. L., 2 Aug 2019, In: Scientific Reports. 9, 1, 11229.

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Microbial use of low molecular weight DOM in filtered and unfiltered freshwater: Role of ultra-small microorganisms and implications for water quality monitoring

    Brailsford, F., Glanville, H., Marshall, M., Golyshin, P., Jones, P. J., Yates, C. A., Owen, A. T. & Jones, D. L., 15 Nov 2017, In: Science of the Total Environment. 598, p. 377-384

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Microbial utilization of low molecular weight organic carbon substrates in cultivated peats in response to warming and soil degradation

    Wen, Y., Zang, H., Freeman, B., Musarika, S., Evans, C. D., Chadwick, D. R. & Jones, D. L., Dec 2019, In: Soil Biology and Biochemistry. 139, 107629.

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail

    Del Pozo, M. V., Fernández-Arrojo, L., Gil-Martínez, J., Montesinos, A., Chernikova, T. N., Nechitaylo, T. Y., Waliszek, A., Tortajada, M., Rojas, A., Huws, S. A., Golyshina, O., Newbold, C. M., Polaina, J., Ferrer, M. & Golyshin, P., 12 Sept 2012, In: Biotechnology for Biofuels. 5, p. 73

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Microbiological Communities in Two Acidic Mine Pit Lakes in the Iberian Pyrite Belt (IPB), Spain

    Falagan, C., Sánchez-España, F. J. & Johnson, D. B., 1 Oct 2013, In: Advanced Materials Research. 825, p. 19-22

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Microbiological and Geochemical Dynamics in Simulated-Heap Leaching of a Polymetallic Sulfide Ore.

    Wakeman, K., Auvinen, H. & Johnson, D. B., 1 Nov 2008, In: Biotechnology and Bioengineering. 101, 4, p. 739-750

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Microbiological quality of chicken wings damaged on the farm or in the processing plant.

    Malpass, M. C., Williams, A. P., Jones, D. L. & Omed, H. M., 1 Jun 2010, In: Food Microbiology. 27, 4, p. 521-525

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy metal mine.

    Hallberg, K. B. & Johnson, D. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 53-66

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline

    Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S. A., Scarlett, K., Griffiths, A., Kaczmarek, M., Foster, J., Peace, A., Golyshin, P., Hassard, F., Brown, N., Kenny, J. G. & McDonald, J., 2018, In: The ISME Journal. 12, p. 386-399

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Microbiome enrichment from contaminated marine sediments unveils novel bacterial strains for petroleum hydrocarbon and heavy metal bioremediation

    Dell'Anno, F., van Zyl, L. J., Trindade, M., Buschi, E., Cannavacciulo, A., Pepi, M., Sansone, C., Brunet, C., Ianora, A., de Pascale, D., Golyshin, P., Dell'Anno, A. & Rastelli, E., 15 Jan 2023, In: Environmental Pollution. 317, 120772.

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Microclimate drives shelter-seeking behaviour in lambing ewes

    Atkin-Willoughby, J., Hollick, S., Pritchard, C., Williams, P., Davies, P., Jones, D. & Smith, A., 12 Dec 2022, In: Forests. 13, 12, p. 2133

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Microdiscectomy compared with transforaminal epidural steroid injection for persistent radicular pain caused by prolapsed intervertebral disc: the NERVES RCT

    Wilby, M. J., Best, A., Wood, E., Burnside, G., Bedson, E., Short, H., Wheatley, D., Hill-McManus, D., Sharma, M., Clark, S., Bostock, J., Hay, S., Baranidharan, G., Price, C., Mannion, R., Hutchinson, P. J., Hughes, D., Marson, A. & Williamson, P. R., Apr 2021, In: Health Technology Assessment. 25, 24, 86 p.

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Microfinance for community development, poverty alleviation and natural resource management in peri-urban Hubli-Dharwad, India.

    Brook, R. M., Hillyer, K. J. & Bhuvaneshwari, G., 1 Apr 2008, In: Environment and Urbanization. 20, 1, p. 149-163

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Microfluidic electronic tongue

    Daikuzonoa, C. M., Dantasb, C. A., Volpatib, D., Constantinod, C. J., Piazzettae, M. H., Gobbie, A. L., Taylor, D. M., Oliveira Jr. O.N., N. V. & Riul, A., 23 Oct 2014, In: Sensors and Actuators B: Chemical. 207, p. 1129–1135

    Research output: Contribution to journalArticlepeer-review

  51. Published

    Microhabitat selection by sea turtles in a dynamic thermal marine environment.

    Schofield, G., Bishop, C. M., Katselidis, K. A., Dimopoulos, P., Pantis, J. D. & Hays, G. C., 1 Jan 2009, In: Journal of Animal Ecology. 78, 1, p. 14-21

    Research output: Contribution to journalArticlepeer-review