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College of Science & Engineering

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  1. Published

    MedX3D: Standards Enabled Desktop Medical 3D.

    John, N. W., Aratow, M., Couch, J., Evestedt, D., Hudson, A. D., Polys, N., Puk, R. F., Ray, A., Victor, K., Wang, Q., Westwood, J. D. (ed.), Haluck, R. S. (ed.), Hoffmann, H. M. (ed.), Mogel, G. T. (ed.), Phillips, R. (ed.), Robb, R. A. (ed.) & Vosburgh, K. G. (ed.), 1 Jan 2008, Studies in Health Technology and Informatics. 2008 ed. IOS Press, p. 189-194

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  2. Published

    Navigating and visualizing three-dimensional data sets.

    John, N. W. & McCloy, R. F., 1 Jan 2004, In: British Journal of Radiology. 77, 2, p. S108-S113

    Research output: Contribution to journal › Article › peer-review

  3. Published

    Cybermedicine tools for communication and learning.

    John, N. W. & Lim, I. S., 1 Jan 2007, In: Journal of Visual Communication in Medicine. 30, 1, p. 4-9

    Research output: Contribution to journal › Article › peer-review

  4. Published

    The impact of Web3D technologies on medical education and training.

    John, N. W., 1 Aug 2007, In: Computers and Education. 49, 1, p. 19-31

    Research output: Contribution to journal › Article › peer-review

  5. Published

    Computational Requirements of the Virtual Patient.

    John, N. W., Hughes, C., Pop, S., Vidal, F. P. & Buckley, O., 1 Jan 2009, p. 140-143.

    Research output: Contribution to conference › Paper

  6. Published

    The Use of Stereoscopy in a Neurosurgery Training Virtual Environment

    John, N., Phillips, N., Ap-Cenydd, L., Pop, S., Coope, D., Kamaly-Asl, I., de Souza, C. & Watt, S., 7 Jul 2017, In: Presence: Teleoperators and Virtual Environments. 25, 4, p. 289-298

    Research output: Contribution to journal › Article › peer-review

  7. Published

    The Implementation and Validation of a Virtual Environment for Training Powered Wheelchair Manoeuvres

    John, N., Pop, S., Day, T., Ritsos, P. D. & Headleand, C., 1 May 2018, In: IEEE Transactions on visualization and computer graphics. 24, 5, p. 1867-1878

    Research output: Contribution to journal › Article › peer-review

  8. Published

    Dissolved Organic Matter in Freshwater Ecosystems: Nature, Origins and Ecological Significance

    Johnes, P. (ed.), Evershed, R. P. (ed.), Jones, D. L. (ed.) & Maberly, S. C. (ed.), 2023, Springer.

    Research output: Book/Report › Book › peer-review

  9. Published

    Effects of bottom trawling on fish foraging and feeding

    Johnson, A. F., Gorelli, G., Jenkins, S. R., Hiddink, J. G. & Hinz, H., 10 Dec 2014, In: Proceedings of the royal Society B. 282, 1799

    Research output: Contribution to journal › Article › peer-review

  10. Published

    Effect of prey abundance and size on the distribution of demersal fishes

    Johnson, A. F., Valls, M., Moranta, J., Jenkins, S. R., Hiddink, J. G. & Hinz, H., 5 Jan 2012, In: Canadian Journal of Fisheries and Aquatic Sciences. 69, 1, p. 191-200

    Research output: Contribution to journal › Article › peer-review

  11. Published

    Linking temperate demersal fish species to habitat: scales, patterns and future directions

    Johnson, A. F., Jenkins, S. R., Hiddink, J. G. & Hinz, H., Sept 2013, In: Fish and Fisheries. 14, 3, p. 256-280

    Research output: Contribution to journal › Article › peer-review

  12. Published

    Developing Sustainable Biotechnologies for Mine Water Treatment in the 21st Century

    Johnson, B., Santos, A. L., Falagan, C., Jones, R. M., Grail, B. M., Holanda, R. & Hedrich, S., Jul 2016, Procddings IMWA 2016. p. 782-789

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  13. Published

    The development and future impact on biotechnologies for mineral processing and metal recovery

    Johnson, B., Aug 2019, Proceedings of the 15th Biennial Meeting of the Society of Geology Applied to Mineral Deposits. p. 1516-1619

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

  14. Published

    Deconstructing and reconstructing microbial communities that promote the natural attenuation of acidic mine waters

    Johnson, B., 2 Apr 2017, In: Abstracts of papers - American Chemical Society. 253

    Research output: Contribution to journal › Meeting Abstract › peer-review

  15. Published

    Biological removal of sulfurous compounds and metals from inorganic wastewaters

    Johnson, B. & Santos, A. L., Oct 2020, Environmental Technologies to Treat Sulfur Pollution: Principles and Engineering. Lens, P. N. L. (ed.). 2nd ed. IWA Publishing, p. 215-246

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  16. Published

    Editorial: Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. & Schippers, A., 14 Mar 2017, In: Frontiers in Microbiology. 8, p. 428

    Research output: Contribution to journal › Article › peer-review

  17. Published

    "Bioshrouding": a novel approach for securing reactive mineral tailings

    Johnson, D. B., Yajie, L. & Okibe, N., Mar 2008, In: Biotechnology Letters. 30, 3, p. 445-9 5 p.

    Research output: Contribution to journal › Article › peer-review

  18. Published

    Acidophile Microbiology in Space and Time

    Johnson, D. B. & Quatrini, R., 21 Feb 2020, In: Current issues in molecular biology. 39, p. 63-76 14 p.

    Research output: Contribution to journal › Article › peer-review

  19. Published

    Dissimilatory reduction of sulfate and zero-valent sulfur at low pH and its significance for bioremediation and metal recovery

    Johnson, D. B. & Sánchez-Andrea, I., 10 Oct 2019, In: Advances in Microbial Physiology. 75, p. 205-231 27 p.

    Research output: Contribution to journal › Review article › peer-review

  20. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 24 Sept 2009, Biohydrometallurgy: a meeting point between microbial ecology,metal recovery processes and environmental remediation. Trans Tech Publications, Vol. 71-73. p. 693-696 (Advanced Materials Research).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  21. Published

    New Insights into Salt-Tolerance in Acidophilic Iron-Oxidising Bacteria

    Johnson, D. B., Grail, B. & Bonnefoy, V., Nov 2015, In: Advanced Materials Research. 1130, p. 3-6

    Research output: Contribution to journal › Article › peer-review

  22. Published
  23. Published

    The Microbiology of Extremely Acidic Environment

    Johnson, D. B. & Aguilera, A., May 2016, Manual of Environmental Microbiology. Yates, M. V., Nakatsu, C. H., Miller, R. V. & Pillai, S. D. (eds.). 4th ed.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  24. Published

    Bioleaching of arsenic-rich cobalt mineral resources, and evidence for concurrent biomineralisation of scorodite during oxidative bio-processing of skutterudite

    Johnson, D. B., Dybowska, A., Schofield, P., Herrington, R., Smith, S. & Santos, A. L., 1 Aug 2020, In: Hydrometallurgy. 195, 105395.

    Research output: Contribution to journal › Article › peer-review

  25. Published

    Bioleaching of Transition Metals From Limonitic Laterite Deposits and Reassessment of the Multiple Roles of Sulfur-Oxidizing Acidophiles in the Process

    Johnson, D. B., Smith, S. & Santos, A. L., 26 Jul 2021, In: Frontiers in Microbiology. 12, 703177.

    Research output: Contribution to journal › Article › peer-review

  26. Published

    Microbial communities and interactions in low pH environments

    Johnson, D. B., 2016, Acidophiles: Life in Extremely Acidic Environments. Quatrini, R. & Johnson, D. B. (eds.). Caister Academic Press Limited, p. 121-138

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  27. Published

    Indirect Redox Transformations of Iron, Copper, and Chromium Catalyzed by Extremely Acidophilic Bacteria

    Johnson, D. B., Hedrich, S. & Pakostova, E., Feb 2017, In: Frontiers in Microbiology. 8, 211.

    Research output: Contribution to journal › Article › peer-review

  28. Published

    Redox Transformations of Iron and Other Transition Metals by Acidophilic Bacteria

    Johnson, D. B., Aug 2015.

    Research output: Contribution to conference › Paper › peer-review

  29. Published

    The Evolution, Current Status, and Future Prospects of Using Biotechnologies in the Mineral Extraction and Metal Recovery Sectors

    Johnson, D. B., 8 Aug 2018, In: Minerals. 8, 8, 343.

    Research output: Contribution to journal › Article › peer-review

  30. Published

    Acidophile microbiology in space and time

    Johnson, D. B. & Quatrini, R., 2016, Acidophiles: Life in Extremely Acidic Environments. Johnson, D. B. & Quatrini, R. (eds.). Caister Academic Press Limited, p. 3-16

    Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review

  31. Published

    Recent Advances in Acidophile Microbiology: Fundamentals and Applications

    Johnson, D. B. (ed.) & Schippers, A. (ed.), 14 Mar 2017, Frontiers Media.

    Research output: Book/Report › Book › peer-review

  32. Published

    Extremophiles and Acidic Environments

    Johnson, D. B. & Aguilera, A., 2019, Encyclopedia of Microbiology . 4tk ed. p. 206-227

    Research output: Chapter in Book/Report/Conference proceeding › Entry for encyclopedia/dictionary › peer-review

  33. Published

    Recent Developments in Microbiological Approaches for Securing Mine Wastes and for Recovering Metals from Mine Waters

    Johnson, D. B., 14 Apr 2014, In: Minerals. 4, 2, p. 279-292

    Research output: Contribution to journal › Article › peer-review

  34. Published

    Sulfobacillus benefaciens sp nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations.

    Johnson, D. B., Joulian, C., d'Hughes, P. & Hallberg, K. B., 1 Nov 2008, In: Extremophiles. 12, 6, p. 789-798

    Research output: Contribution to journal › Article › peer-review

  35. Published

    Investigation of the microbial diversity of an extremely acidic, metal-rich water body (Lake Robule, Bor, Serbia)

    Johnson, D. B., Stanković, S., Morić, I., Pavić, A., Vasiljević, B., Johnson, B. D. & Cvetković, V., 30 Jan 2014, In: Journal of the Serbian Chemical Society. 79, 6, p. 729-741

    Research output: Contribution to journal › Article › peer-review

  36. Published

    Biomining: an Established and Dynamic Biotechnology

    Johnson, D. B., 1 Dec 2012, In: Microbiology Indonesia. 6, 4, p. 189-193

    Research output: Contribution to journal › Article › peer-review

  37. Published

    The microbiology of acidic mine waters.

    Johnson, D. B. & Hallberg, K., 1 Sept 2003, In: Research in Microbiology. 154, 7, p. 466-473

    Research output: Contribution to journal › Article › peer-review

  38. Published

    Biohydrometallurgy and the environment: intimate and important associations.

    Johnson, D. B., Harrison, S. T. (ed.), Rawlings, D. E. (ed.) & Petersen, J. (ed.), 1 Jan 2005, p. liii-lxvii.

    Research output: Contribution to conference › Paper

  39. Published

    Development and application of bioprocessing technologies in the metal mining industry

    Johnson, D. B., 1 Aug 2012.

    Research output: Contribution to conference › Paper

  40. Published

    Role of pure and mixed cultures of gram-positive eubacteria in mineral leaching.

    Johnson, D. B., Bacelar-Nicolau, P., Okibe, N., Yahya, A., Hallberg, K. B., Ciminelli, V. S. (ed.) & Garcia Jr, O. (ed.), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 461-470

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  41. Published

    Sulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters.

    Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 1 Jan 2009, p. 693-696.

    Research output: Contribution to conference › Paper

  42. Published

    Isolation and characterization of Acidicaldus organivorus, gen. nov., sp nov.: a novel sulfur-oxidizing, ferric iron-reducing thermo-acidophilic heterotrophic Proteobacterium.

    Johnson, D. B., Stallwood, B., Kimura, S. & Hallberg, K. B., 1 Apr 2006, In: Archives of Microbiology. 185, 3, p. 212-221

    Research output: Contribution to journal › Article › peer-review

  43. Published

    Novel biosulfidogenic system for the selective recovery of metals from acidic leach liquors and waste streams

    Johnson, D. B., Sen, A. M., Kimura, S., Rowe, O. F. & Hallberg, K. B., 1 Mar 2006, In: Mineral Processing and Extractive Metallurgy. 115, 1, p. 19-24

    Research output: Contribution to journal › Article › peer-review

  44. Published

    Biomining in reverse gear: using bacteria to extract metals from oxidized ores

    Johnson, D. B. & du Plessis, C. A., 1 May 2015, In: Minerals Engineering. 75, 1, p. 2-5

    Research output: Contribution to journal › Article › peer-review

  45. Published
  46. Published

    Development of an integrated microbiological approach for remediation of acid mine drainage and recovery of heavy metals.

    Johnson, D. B., Rowe, O., Kimura, S., Hallberg, K. B., Jarvis, A. P. (ed.), Dudgeon, B. A. (ed.) & Younger, P. L. (ed.), 1 Jan 2004, p. 151-157.

    Research output: Contribution to conference › Paper

  47. Published

    Isolation and phylogenetic characterisation of acidophilic microorganisms indigenous to acidic drainage wartes at an abandoned Norwegian copper mine

    Johnson, D. B., Rolfe, S., Hallberg, K. & Iversen, E., 1 Oct 2001, In: Environmental Microbiology. 3, 10, p. 630-637

    Research output: Contribution to journal › Article › peer-review

  48. Published

    Redox transformations of iron at extremely low pH: fundamental and applied aspects

    Johnson, D. B., Kanao, T. & Hedrich, S., 16 Mar 2012, In: Frontiers in Microbiology. 3, p. 96

    Research output: Contribution to journal › Article › peer-review

  49. Published

    Reductive dissolution of minerals and selective recovery of metals using acidophilic iron- and sulfate-reducing acidophiles

    Johnson, D. B., 1 Oct 2012, In: Hydrometallurgy. 127-128, p. 172-177

    Research output: Contribution to journal › Article › peer-review

  50. Published

    Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system.

    Johnson, D. B. & Hallberg, K. B., 1 Feb 2005, In: Science of the Total Environment. 338, 1-2, p. 81-93

    Research output: Contribution to journal › Article › peer-review

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