College of Science & Engineering

  1. Published

    Initial sequencing and analysis of the human genome

    International Human Genome Sequencing Consortium & Smith, A., 15 Feb 2001, In: Nature. 409, 6822, p. 860-921

    Research output: Contribution to journalReview articlepeer-review

  2. Published

    How the worm was won - the C-elegans genome sequencing project

    C. elegans sequencing consortium & Smith, A., Feb 1999, In: Trends in Genetics. 15, 2, p. 51-58

    Research output: Contribution to journalReview articlepeer-review

  3. Published

    TRY plant trait database - enhanced coverage and open access

    Nutrient Network & Markesteijn, L., Jan 2020, In: Global Change Biology. 26, 1, p. 119-188 70 p.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    The GRIFFIN facility for Decay-Spectroscopy studies at TRIUMF-ISAC

    GRIFFIN Collaboration, 21 Feb 2019, In: Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment. 918, p. 9-29

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Finishing the euchromatic sequence of the human genome

    International Human Genome Sequencing Consortium & Smith, A., 21 Oct 2004, In: Nature. 431, 7011, p. 931-945

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Plant diversity patterns in neotropical dry forests and their conservation implications

    DRYFLOR, McDonald, M., Banda-R, K., Delgado-Salinas, A., Dexter, K. G., Linares-Palomino, R., Oliveira-Filho, A., Prado, D., Pullan, M., Quintana, C., Riina, R., Rodríguez M, G. M., Weintritt, J., Acevedo-Rodríguez, P., Adarve, J., Álvarez, E., Aranguren B., A., Arteaga, J. C., Aymard, G., Castaño, A. & Ceballos-Mago, N., 23 Sept 2016, In: Science. 353, 6306, p. 1383-1387 4 p.

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Genome sequence of the nematode C-elegans: A platform for investigating biology

    C. elegans sequencing consortium & Smith, A., 11 Dec 1998, In: Science. 282, 5396, p. 2012-2018

    Research output: Contribution to journalReview articlepeer-review

  8. Published

    A TNF-like trimeric lectin domain from Burkholdeda cenocepacia with specificity for fucosylated human histo-blood group antigens.

    Šulák, O., Delia, M., Lahmann, M., Varrot, A., Imberty, A. & Wimmerová, M., 13 Jan 2010, In: Structure. 18, 1, p. 59-72

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Land Suitability Zoning for Ecotourism Planning and Development of Dikgatlhong Dam, Botswana

    Šiljeg, A., Cavric, B., Marić, I., Barada, M. & Šiljeg, S., Apr 2019.

    Research output: Contribution to conferenceAbstractpeer-review

  10. Published

    Quantifying the portfolio of larval responses to salinity and temperature in a coastal-marine invertebrate: a cross population study along the European coast

    Šargač, Z., Gimenez Noya, L., Gonzalez-Ortegon, E., Harzsch, S., Tremblay, N. & Torres, G., Jun 2022, In: Marine Biology. 169, 6, 18 p., 81.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Contrasting offspring responses to variation in salinity and temperature among populations of a coastal crab: A maladaptive ecological surprise?

    Šargač, Z., Gimenez, L., Harzsch, S., Krieger, J., Fjordside, K. & Torres, G., 28 Oct 2021, In: Marine Ecology Progress Series. 677, p. 51-65 15 p.

    Research output: Contribution to journalArticlepeer-review

  12. Published

    New microbiological strategies that enable the selective recovery and recycling of metals from acid mine drainage and mine process waters

    Ňancucheo, I., Hedrich, S. & Johnson, D. B., 1 Nov 2012, In: Mineralogical Magazine. 76, 7, p. 2683-2692

    Research output: Contribution to journalArticlepeer-review

  13. Published

    Significance of Microbial Communities and Interactions in Safeguarding Reactive Mine Tailings by Ecological Engineering

    Ňancucheo, I. & Johnson, D. B., 1 Dec 2011, In: Applied and Environmental Microbiology. 77, 23, p. 8201-8208

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Acidophilic algae isolated from mine-impacted environments and their roles in sustaining heterotrophic acidophiles

    Ňancucheo, I. & Johnson, D. B., 11 Sept 2012, In: Fontiers in Microbiology. 3, p. 325

    Research output: Contribution to journalArticlepeer-review

  15. Published

    Selective removal of transition metals from acidic mine waters by novel consortia of acidophilic sulfidogenic bacteria

    Ňancucheo, I. & Johnson, D. B., 1 Jan 2012, In: Microbial Biotechnology. 5, 1, p. 34-44

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Does The Glucocorticoid Stress Response Make Toads More Toxic? An Experimental Study on The Regulation of Bufadienolide Toxin Synthesis

    Üveges, B., Kalina, C., Szabó, K., Móricz, Á. M., Holly, D., Gabor, C. R., Hettyey, A. & Bókony, V., 2023, In: Integrative Organismal Biology. 5, 1, p. obad021 obad021.

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Relative growth and size at onset of sexual maturity of the brown crab, Cancer pagurus in the Isle of Man, Irish Sea

    Öndes, F., Kaiser, M. & Murray, L., 2017, In: Marine Biology Research. 13, 2, p. 237-245

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Early deglaciation of the British-Irish Ice Sheet on the Atlantic shelf northwest of Ireland driven by glacioisostatic depression and high relative sea level

    Ó Cofaigh, C., Weilbach, K., Lloyd, J., Benetti, S., Callard, S. L., Purcell, C., Chiverrell, R. C., Dunlop, P., Saher, M., Livingstone, S., Van Landeghem, K., Moreton, S., Clark, C. & Fabel, D., 15 Mar 2019, In: Quaternary Science Reviews. 208, p. 76-96

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Sulfate Removal from Extremely Acidic Wastewaters Using Consortia of Acidophilic Sulfate-Reducing Bacteria

    Ñancucheo, I. & Johnson, D. B., 1 Oct 2013, In: Advanced Materials Research. 825, p. 487-490

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Kalman Filter-Based Super-Twisting Sliding Mode Control of Shunt Active Power Filter for Electric Vehicle Charging Station Applications

    Çelik, D., Ahmed, H. & Meral, M. E., 13 Sept 2022, In: IEEE Transactions on Power Delivery. 11 p.

    Research output: Contribution to journalArticlepeer-review

  21. E-pub ahead of print

    Evaluating the impact of biodiversity offsetting on native vegetation

    zu Ermgassen, S. O. S. E., Devenish, K., Simmons, B. A., Gordon, A., Jones, J. P. G., Maron, M., Schulte to Bühne, H., Sharma, R., Sonter, L. J., Strange, N., Ward, M. & Bull, J. W., 10 Jun 2023, (E-pub ahead of print) In: Global Change Biology. 1 p.

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Ten priority questions for increasing the consistency and success in hatchery production of the European flat oyster for habitat restoration

    zu Ermgassen, S. O. S. E., Albentosa, M., Bakker, N., Blanco, A., Bonacic, K., Carboni, S., Brundu, G., Colsoul, B., Pineiro, N. A., da Costa, F., Dubbeldam, M., Fabra, M., Galley, T., Gowland, D., Jones, N., Hernandez, A., Hernandis, S., Laugen, A. T., Magnesen, T., Malham, S., Pogoda, B., Preston, J., Sas, H., Saurel, C., Barja, J. L. & Kamermans, P., 20 Oct 2023, In: Aquatic Living Resources. 36, 10 p., 29.

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Ecosystem service responses to rewilding - first-order estimates from 27 years of rewilding in the Scottish Highlands

    zu Ermgassen, S. O. S. E., McKenna, T., Gordon, J. & Willcock, S., 2018, In: International Journal of Biodiversity Science, Ecosystem Services & Management. 14, 1, p. 165-178

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Evaluating the impact of biodiversity offsetting on native vegetation

    zu Ermgassen, S. O. S. E., Devenish, K., Simmons, B. A., Gordon, A., Jones, J. P. G., Maron, M., Schulte to Bühne, H., Sharma, R., Sonter, L. J., Strange, N., Ward, M. & Bull, J. W., 23 Feb 2023, OSF Preprints, p. 1-24.

    Research output: Working paperPreprint

  25. Published

    Eddies and the distribution of Eddy Kinetic Energy in the Arctic Ocean

    von Appen, W., Baumann, T. M., Janout, M., Koldunov, N., Lenn, Y-D., Pickart, R., Scott, R. & Wang, Q., 27 Apr 2022, In: Oceanography. 35, 2

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Environmental DNA biomonitoring in biodiversity hotspots: A case study of fishes of the Okavango Delta

    von der Heyden, S., Neef, G., Grevesse, T., Cwecwe, Y., Sado, T., Miya, M., Mosie, I., Creer, S., Skelton, P. & von Brandis, R., 28 Nov 2023, In: Environmental DNA. 5, 6, p. 1720-1731

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Geographical variation in the carbon, nitrogen, and phosphorus content of blue mussels, Mytilus edulis

    van der Schatte Olivier, A., Le Vay, L., Malham, S. K., Christie, M., Wilson, J., Allender, S., Schmidlin, S., Brewin, J. M. & Jones, L., Jun 2021, In: Marine pollution bulletin. 167, 112291.

    Research output: Contribution to journalArticlepeer-review

  28. Published

    The hydraulic efficiency–safety trade-off differs between lianas and trees

    van der Sande, M. T., Poorter, L., Schnitzer, S. A., Engelbrecht, B. M. J. & Markesteijn, L., May 2019, In: Ecology. 100, 5, p. e02666

    Research output: Contribution to journalArticlepeer-review

  29. Published

    The Rural Household Multiple Indicator Survey, data from 13,310 farm households in 21 countries

    van Wijk, M., Hammond, J., Gorman, L., Adams, S., Ayantunde, A., Baines, D., Bolliger, A., Bosire, C., Carpena, P., Chesterman, S., Chinyophiro, A., Daudi, H., Dontsop, P., Douxchamps, S., Emera, W. D., Fraval, S., Fonte, S., Hok, L., Kiara, H., Kihoro, E., Korir, L., Lamanna, C., Long, C. T. M., Manyawu, G., Mehrabi, Z., Mengistu, D. K., Mercado, L., Meza, K., Mora, V., Mutemi, J., Ng’endo, M., Njingulula, P., Okafor, C., Pagella, T., Phengsavanh, P., Rao, J., Ritzema, R., Rosenstock, T. S., Skirrow, T., Steinke, J., Stirling, C., Gabriel Suchini, J., Teufel, N., Thorne, P., Vanek, S., van Etten, J., Vanlauwe, B., Wichern, J. & Yameogo, V., 11 Feb 2020, In: Scientific data. 7, 1, p. 46 46.

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Flexibility of habitat use innovel environments: Insights from a translocation experiment with Lesser Black-backed Gulls

    van Toor, M., Arriero, E., Holland, R., J. Huttunen, M., Juvaste, R., Müller, I., Thorup, K., Wikelski, M. & Safi, K., 18 Jan 2017, In: Royal Society Open Science. 4, 160164.

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Convergent evolution of toxin resistance in animals

    van Thiel, J., Khan, M. A., Wouters, R. M., Harris, R. J., Casewell, N. R., Fry, B. G., Kini, R. M., Mackessy, S. P., Vonk, F. J., Wüster, W. & Richardson, M. K., Oct 2022, In: Biological Reviews. 97, 5, p. 1823-1843 21 p.

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Climate change adaptation in and through agroforestry: four decades of research initiated by Peter Huxley

    van Noordwijk, M., Coe, R., Sinclair, F. L., Luedeling, E., Bayala, J., Muthuri, C. W., Cooper, P., Kindt, R., Duguma, L., Lamanna, C. & Minang, P. A., 9 Jun 2021, In: Mitigation and Adaptation Strategies for Global Change. 26, 5, 18.

    Research output: Contribution to journalReview articlepeer-review

  33. Published

    Forest regeneration can positively contribute to local hydrological ecosystem services: implications for forest landscape restoration

    van Meerveld, I., Jones, J. P. G., Ghimire, C. P., Zwartendijk, B. W., Lahitiana, J., Ravelona, M. & Mulligan, M., Apr 2021, In: Journal of Applied Ecology. 58, 4, p. 755-765 11 p.

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Microalgal community structure and primary production in Arctic and Antarctic sea ice: A synthesis.

    van Leeuwe, M., Tedesco, L., Arrigo, K. R., Assmy, P., Meiners, K. M., Rintala, J-M., Selz, V., Thomas, D. N. & Stefels, J., 11 Jan 2018, In: Elementa: Science of the Anthropocene. 6, 4, 25 p.

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Local-scale projections of coral reef futures and implications of the Paris Agreement

    van Hooidonk, R., Maynard, J. A., Tamelander, J., Gove, J. M., Ahmadia, G. N., Raymundo, L., Williams, G., Heron, S. F. & Planes, S., Dec 2016, In: Scientific Reports. 6, 39666.

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Similar effects of bottom trawling and natural disturbance on composition and function of benthic communities across habitats

    van Denderen, P. D., Bolam, S. G., Hiddink, J. G., Jennings, S., Kenny, A., Rijinsdorp, A. D. & van Kooten, T., 15 Dec 2015, In: Marine Ecology Progress Series. 541, p. 31-43

    Research output: Contribution to journalArticlepeer-review

  37. Published

    Evaluating impacts of bottom trawling and hypoxia on benthic communities at the local, habitat, and regional scale using a modelling approach

    van Denderen, P. D., Bolam, S. G., Friedland, R., Hiddink, J. G., Noren, K., Rijnsdrop, A. D., Skold, M., Tornroos, A., Virtanen, E. A. & Valanko, S., Feb 2020, In: ICES Journal of Marine Science. 77, 1, p. 278-289

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Effects of bottom trawling and hypoxia on benthic invertebrate communities

    van Denderen, P. D., Tornroos, A., Sciberras, M., Hinz, H., Friedland, R., Lasota, R., Mangano, M. C., Robertson, C., Valanko, S. & Hiddink, J. G., 11 Aug 2022, In: Marine Ecology Progress Series. 694, p. 13-27 15 p.

    Research output: Contribution to journalArticlepeer-review

  39. Published

    The effect of ocean acidification on the intertidal hermit crab Pagurus criniticornis is not modulated by cheliped amputation and sex

    turra, A., Ragagnin, M., McCarthy, I. & Fernandez, W., Jan 2020, In: Marine Environmental Research. 153, 104794.

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Regional warming changes fish species richness in the eastern North Atlantic Ocean

    ter Hofstede, R., Hiddink, J. G. & Rijnsdorp, A. D., 2010, In: Marine Ecology Progress Series. 414, p. 1-9

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Ferredox: A biohydrometallurgical processing concept for limonitic nickel laterites

    du Plessis, C. A., Slabbert, W., Hallberg, K. B. & Johnson, D. B., 1 Oct 2011, In: Hydrometallurgy. 109, 3-4, p. 221-229

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Vitellogenesis and changes in lipid and protein content of oocytes of Trophon geversianus (Neogastropoda: Muricidae) in Golfo San Jose (Chubut, Argentina)

    de la Barra, P., Gimenez, J., Knack de Almeida, H. & Arrighetti, F., Mar 2014, In: Helgoland Marine Research. 68, 1, p. 179-185

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Tidal water exchange drives fish and crustacean abundances in salt marshes

    de la Barra, P., Skov, M., Lawrence, P., Schiaffi, J. I. & Hiddink, J. G., 11 Aug 2022, In: Marine Ecology Progress Series. 694, p. 61-72

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Predicting the distribution of a portunid crab in Patagonian coastal waters

    de la Barra, P., Svendsen, G., Romero, M. A., Avaca, M. S. & Narvarte, M., 19 Mar 2020, In: Marine Ecology Progress Series. 638, p. 95-105

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Streamwise turbulence modulation in non-uniform open-channel clay suspension flows

    de Vet, M. G. W., Fernandez, R., Baas, J. H., McCaffrey, W. D. & Dorrell, R. M., Aug 2023, In: Journal of Geophysical Research: Earth Surface. 128, 8, e2022JF006781.

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Spatial zoning of microbial functions and plant-soil nitrogen dynamics across a riparian area in an extensively grazed livestock system

    de Sousa, L., Glanville, H., Marshall, M., Williams, A., Abadie, M., Clark, I. M., Blaud, A. & Jones, D. L., May 2018, In: Soil Biology and Biochemistry. 120, p. 153-164

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Quantifying the contribution of riparian soils to the provision of ecosystem services

    de Sosa, L. L., Glanville, H. C., Marshall, M. R., Williams, A. P. & Jones, D. L., 15 May 2018, In: Science of the Total Environment. 624, p. 807-819

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Delineating and mapping riparian areas for ecosystem service assessment

    de Sosa, L. L., Glanville, H. C., Marshall, M. R., Abood, S. A., Williams, A. P. & Jones, D. L., Mar 2018, In: ECOHYDROLOGY. 11, 2, e1928.

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Stoichiometric constraints on the microbial processing of carbon with soil depth along a riparian hillslope

    de Sosa, L. L., Glanville, H. C., Marshall, M. R., Schnepf, A., Cooper, D. M., Hill, P. W., Binley, A. & Jones, D. L., Nov 2018, In: Biology and Fertility of Soils. 54, 8, p. 949-963

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Importance of Micromonospora spp. as colonizers of cellulose in freshwater lakes as demonstrated by quantitative reverse transcriptase PCR of 16S rRNA

    de Menezes, A. B., McDonald, J. E., Allison, H. E. & McCarthy, A. J., May 2012, In: Applied and Environmental Microbiology. 78, 9, p. 3495-9 5 p.

    Research output: Contribution to journalArticlepeer-review

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