School of Environmental & Natural Sciences

  1. 2012
  2. Published

    Meta-analysis of clinical data using human meiotic genes identifies a novel cohort of highly restricted cancer-specific marker genes.

    Stuart, N. S., Wakeman, J., Mcfarlane, R. J., Feichtinger, J., Aldeailej, I., Anderson, R., Almutairi, M., Almatrafi, A., Alsiwiehri, N., Griffiths, K., Stuart, N., Wakeman, J. A., Larcombe, L. & McFarlane, R. J., 13 Aug 2012, In: Oncotarget. 3, 8, p. 843-853

    Research output: Contribution to journalArticlepeer-review

  3. Published

    SNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus)

    Helyar, S. J., Limborg, M. T., Bekkevold, D., Babbucci, M., van Houdt, J., Maws, G. E., Bargelloni, L., Nielsen, R. O., Taylor, M. I., Ogden, R., Cariani, A., Carvalho, G. R., FishPopTrace Consortium, N. V. & Panitz, F., 7 Aug 2012, In: PLoS ONE. 7, 8, p. e42089

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Acting fast helps avoid extinction

    Martin, T. G., Nally, S., Burbidge, A. A., Arnall, S., Garnett, S. T., Hayward, M. W., Lumsden, L. F., Menkhorst, P., McDonald-Madden, E. & Possingham, H. P., 1 Aug 2012, In: Conservation Letters. 5, 4, p. 274-280

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Depositional history of the Tyne valley associated with retreat and stagnation of Late Devensian Ice Streams

    Yorke, L., Rumsby, B. T. & Chiverrell, R. C., 1 Aug 2012, In: Proceedings of the Geologists' Association. 123, 4, p. 608-625

    Research output: Contribution to journalArticlepeer-review

  6. Published
  7. Published

    Disruption of Microtubule Integrity Initiates Mitosis during CNS Repair

    Bossing, T., Barros, C. S., Fischer, B., Russell, S. & Shepherd, D., 1 Aug 2012, In: Developmental Cell. 23, 2, p. 433-440

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Effects of prokaryotic diversity changes on hydrocarbon degradation rates and metal partitioning during bioremediation of contaminated anoxic marine sediments

    Rocchetti, L., Beolchini, F., Hallberg, K. B., Johnson, D. B. & Dell'Anno, A., 1 Aug 2012, In: Marine Pollution Bulletin. 64, 8, p. 1688-1698

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)

    De Bruyn, M., Limborg, M. T., Helyar, S. J., DeBruyn, M., Taylor, M. I., Nielson, E. E., Ogden, R., Carvalho, G. R. & Bekkevold, D., 1 Aug 2012, In: Molecular Ecology. 21, 15, p. 3686-3703

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Psychological Morbidity of Farmers and Non-farming Population: Results from a UK Survey

    Hounsome, B., Edwards, R. T., Hounsome, N. & Edwards-Jones, G., 1 Aug 2012, In: Community Mental Health Journal. 48, 4, p. 503-510

    Research output: Contribution to journalArticlepeer-review

  11. Published

    The prediction of adaptive evolution: empirical application of the secondary theorem of selection and comparison to the breeder's equation

    Morrissey, M. B., Parker, D. J., Korsten, P., Pemberton, J. M., Kruuk, L. E. B. & Wilson, A. J., 1 Aug 2012, In: Evolution. 66, 8, p. 2399-410 12 p.

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Survival and metabolic activity of lux-marked Escherichia coli O157:H7 in different types of milk

    Alhelfi, N. A., Lahmer, R. A., Jones, D. & Williams, A. P., Aug 2012, In: Journal of Dairy Research. 79, 3, p. 257-261

    Research output: Contribution to journalArticlepeer-review

  13. Published

    Substituent Effects on Charge Transport in Films of Au Nanocrystals

    Prabhakar, J. T., Stansfield, G. L. & Thomas, P. J., 25 Jul 2012, In: Journal of the American Chemical Society. 134, 29, p. 11888-11891

    Research output: Contribution to journalArticlepeer-review

  14. Published

    ‘One-pot’ Hammett plots: a general method for the rapid acquisition of relative rate data

    Yau, H. M., Croft, A. K. & Harper, J. B., 24 Jul 2012, In: Chemical Communications. 2012, 71, p. 8937-8938

    Research output: Contribution to journalArticlepeer-review

  15. Published

    Making Robust Policy Decisions Using Global Biodiversity Indicators

    Nicholson, E., Collen, B., Barausse, A., Blanchard, J. L., Costelloe, B. T., Sullivan, K. M. E., Underwood, F. M., Burn, R. W., Fritz, S., Jones, J. P. G., McRae, L., Possingham, H. P. & Milner-Gulland, E. J., 18 Jul 2012, In: PLoS ONE. 7, 7, e41128.

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica

    Lemak, S., Tchigvintsev, A., Petit, P., Flick, R., Singer, A. U., Brown, G., Evdokimova, E., Egorova, O., Gonzalez, C. F., Chernikova, T. N., Yakimov, M. M., Kube, M., Reinhardt, R., Golyshin, P. N., Savchenko, A. & Yakunin, A. F., 15 Jul 2012, In: Biochemical Journal. 445, 2, p. 193-203

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Antibacterial action of chitosan-arginine against Escherichia coli O157 in chicken juice

    Lahmer, R. A., Williams, A. P., Townsend, S., Baker, S. & Jones, D. L., 1 Jul 2012, In: Food Control. 26, 1, p. 206-211

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Geomicrobiology of extremely acidic subsurface environments

    Johnson, D. B., 1 Jul 2012, In: Fems Microbiology Ecology. 81, 1, p. 2-12

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Influence of Land Use and Nutrient Flux on Metabolic Activity of E. coli O157 in River Water

    Williams, A. P., Quilliam, R. S., Thorn, C. E., Cooper, D., Reynolds, B. & Jones, D. L., 1 Jul 2012, In: Water, Air and Soil Pollution. 223, 6, p. 3077-3083

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Local knowledge of impacts of tree cover on ecosystem services in smallholder coffee production systems

    Sinclair, F. L., Cerdán, C. R., Rebolledo, M. C., Soto, G. & Rapidel, B. S., 1 Jul 2012, In: Agricultural Systems. 110, p. 119-130

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Molecular biogeography and phylogeography of the freshwater fauna of the Indo-Australian Archipelago

    De Bruyn, M., de Bruyn, M., von Rintelen, K., von Rintelen, T., Mather, P. B. & Carvalho, G. R., 1 Jul 2012, Biotic Evolution and Environmental Change in Southeast Asia. 2012 ed. Cambridge University Press

    Research output: Chapter in Book/Report/Conference proceedingChapter

  22. Published

    The Rad4TopBP1 ATR-Activation Domain Functions in G1/S Phase in a Chromatin-Dependent Manner

    Caspari, T. M., Lin, S. J., Wardlaw, C. P., Morishita, T., Miyabe, I., Chahwan, C., Caspari, T., Schmidt, U., Carr, A. M. & Garcia, V., 28 Jun 2012, In: PLOS Genetics. 8, 6, p. e1002801

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Functional Metagenomics Unveils a Multifunctional Glycosyl Hydrolase from the Family 43 Catalysing the Breakdown of Plant Polymers in the Calf Rumen

    Ferrer, M., Ghazi, A., Beloqui, A., Vieites, J. M., Lopez-Cortes, N., Marın-Navarro, J., Nechitaylo, T. Y., Guazzaroni, M. E., Polaina, J., Waliczek, A., Chernikova, T. N., Reva, O. N., Golyshina, O. V. & Golyshin, P. N., 25 Jun 2012, In: PLoS ONE. 7, 6, p. e38134

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Selective recovery of metals from Maurliden (Sweden) mine water using novel biomineralization technologies

    Hedrich, S. & Johnson, D. B., 19 Jun 2012.

    Research output: Contribution to conferencePaper

  25. Published

    Synthesis, spectroscopic and thermal characterization on non-metal cation (NMC) pentaborate salts containing cations derived from histidine and arginine

    Kose, D. A., Beckett, M. A. & Colak, N., 19 Jun 2012, In: Hacettepe Journal of Biology and Chemistry. 40, 3, p. 219-225

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Mites Parasitic on Australasian and African Spiders Found in the Pet Trade; a Redescription of Ljunghia pulleinei Womersley

    Masan, P., Simpson, C., Perotti, M. A. & Braig, H., 13 Jun 2012, In: PLoS ONE. 7, 6, p. e39019

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Maximum-entropy closure of hydrodynamic moment hierarchies including correlations

    Hughes, K. H. & Burghardt, I., 7 Jun 2012, In: Journal of Chemical Physics. 136, 21, Article 214109.

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Discrete functional pools of soil organic matter in a UK grassland soil are differentially affected by temperature and priming

    Farrar, J., Boddy, E., Hill, P. W. & Jones, D. L., 1 Jun 2012, In: Soil Biology and Biochemistry. 49, p. 52-60

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Functional and structural responses of bacterial and methanogen communities to 3-year warming incubation in different depths of peat mire

    Kim, S. Y., Freeman, C., Fenner, N. & Kang, H., 1 Jun 2012, In: Applied Soil Ecology. 57, p. 23-30

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Impacts of climate change on August stream discharge in the Central-Rocky Mountains

    Leppi, J. C., DeLuca, T. H., Harrar, S. W. & Running, S. W., 1 Jun 2012, In: Climatic Change. 112, 3-4, p. 997-1014

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Life and Behaviour of Wolves: Predation Risk and the structure of eco-systems

    Haswell, P. M. & Haswell, P., 1 Jun 2012, In: Wolf Print. 46, Summer, p. 16-17

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Sacred groves in the Gamo Highlands of southern Ethiopia: biocultural values and threats

    Desissa, D. & Healey, J. R., 1 Jun 2012, In: Langscape. 2, 11, p. 44-47

    Research output: Contribution to journalArticlepeer-review

  33. Published

    Spatial and temporal changes in group dynamics and range use enable anti-predator responses in African buffalo

    Tambling, C. J., Druce, D. J., Hayward, M. W., Castley, G., Adendorff, J. & Kerley, G. I., 1 Jun 2012, In: Ecology. 93, 6, p. 1297–1304

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Getting what you pay for: the challenge of measuring success in conservation

    Jones, J. P. G., Jun 2012, In: Animal Conservation. 15, 3, p. 227-228

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Microbial and plant uptake of free amino sugars in grassland soils

    Roberts, P. & Jones, D. L., Jun 2012, In: Soil Biology and Biochemistry. 49, p. 139-149

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Opinions of the public, conservationists and magistrates on sentencing wildlife trade crimes in the UK

    St John, F. A. V., Edwards-Jones, G. & Jones, J. P. G., Jun 2012, In: Environmental Conservation. 39, 2, p. 154-161

    Research output: Contribution to journalArticlepeer-review

  37. Published

    Clay and biochar amendments decreased inorganic but not dissolved organic nitrogen leaching in soil

    Dempster, D. N., Jones, D. L. & Murphy, D. V., 25 May 2012, In: Soil & Tillage Research. 50, 3, p. 216-221

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

    Taylor, M. I., Nielsen, E. E., Cariani, A., Aoidh, E. M., Maes, G. E., Milano, I., Ogden, R., Taylor, M., Hemmer-Hansen, J., Babbucci, M., Bargelloni, L., Bekkevold, D., Diopere, E., Grenfell, L., Helyar, S., Limborg, M. T., Martinsohn, J. T., McEwing, R., Panitz, F., Patarnello, T., Tinti, F., Van Houdt, J. K., Volckaert, F. A., Waples, R. S., FishPopTrace consortium, N. V. & Carvalho, G. R., 22 May 2012, In: Nature Communications. 3, p. Article No. 851

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Naturally occurring culturable aerobic gut flora of adult Phlebotomus papatasi, vector of Leishmania major in the Old World

    Mukhopadhyay, J., Braig, H. R., Rowton, E. D. & Ghosh, K., 22 May 2012, In: PLoS ONE. 7, 5, p. e35748

    Research output: Contribution to journalArticlepeer-review

  40. Published

    More Stable Productivity of Semi Natural Grasslands than Sown Pastures in a Seasonally Dry Climate

    Ospina, S., Rusch, G. M., Pezo, D., Casanoves, F. & Sinclair, F. L., 9 May 2012, In: PLoS ONE. 7, 5, p. e.35555

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Ultra-fast co-sensitization and tri-sensitization of dye-sensitized solar cells with N719, SQ1 and triarylamine dyes

    Holliman, P. J., Mohsen, M., Connell, A., Davies, M. L., Al-Salihi, K., Pitak, M. B., Tizzard, G. J., Coles, S. J., Harrington, R. W., Clegg, W., Serpa, C., Fontes, O. H., Charbonneau, C. & Carnie, M. J., 2 May 2012, In: Journal of Materials Chemistry. 26, p. 13318-13327

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Bigger may be better in soil N cycling: Does rapid acquisition of small L-peptides by soil microbes dominate fluxes of protein-derived N in soil?

    Hill, P. W., Farrell, M. & Jones, D. L., 1 May 2012, In: Soil Biology and Biochemistry. 48, p. 106-112

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Detection and Identification of Species-Specific Bacteria Associated with Synanthropic Mites

    Hubert, J., Kopecký, J., Perotti, M. A., Nesvorná, M., Braig, H. R., Ságová-Marečková, M., Macovei, M. & Zurek, L., 1 May 2012, In: Microbial Ecology. 63, 4, p. 919-928

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Elucidation of carbon transfer in a mixed culture of Acidiphilium cryptum and Acidithiobacillus ferrooxidans using protein-based stable isotope probing

    Kremer, R., Hedrich, S., Taubert, M., Baumann, S., Schlömann, M., Johnson, D. B. & Seifert, J., 1 May 2012, In: Journal of Integreated OMICS. 2, 1, p. 37-45

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Fate of pathogens in a simulated bioreduction system for livestock carcasses

    Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G. & Williams, A. P., 1 May 2012, In: Waste Management. 32, 5, p. 933-938

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Gold nanoparticles as carriers for a synthetic Streptococcus pneumoniae type 14 conjugate vaccine

    Safari, D., Marradi, M., Chiodo, F., Dekker, H. A., Shan, Y., Adamo, R., Oscarson, S., Rijkers, G. T., Lahmann, M., Kamerling, J. P., Penadés, S. & Snippe, H., 1 May 2012, In: Nanomedicine. 7, 5, p. 651-662

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Mineralization of low molecular weight carbon substrates in soil solution under laboratory and field conditions

    Glanville, H., Rousk, J., Golyshin, P. & Jones, D. L., 1 May 2012, In: Soil Biology and Biochemistry. 48, p. 88-95

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Decreased soil microbial biomass and nitrogen mineralisation with Eucalyptus biochar addition to a coarse textured soil

    Dempster, D. N., Gleeson, D. B., Solaiman, Z. M. & Jones, D. L., May 2012, In: Plant and Soil. 354, 1-2, p. 311-324

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Evidence for host-specificity of culturable fungal root endophytes from the carnivorous plant Pinguicula vulgaris (Common Butterwort)

    Quilliam, R. S. & Jones, D. L., May 2012, In: Mycological Progress. 11, 2, p. 583-585

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Importance of Micromonospora spp. as colonizers of cellulose in freshwater lakes as demonstrated by quantitative reverse transcriptase PCR of 16S rRNA

    de Menezes, A. B., McDonald, J. E., Allison, H. E. & McCarthy, A. J., May 2012, In: Applied and Environmental Microbiology. 78, 9, p. 3495-9 5 p.

    Research output: Contribution to journalArticlepeer-review

  51. Published

    Organic nitrogen mineralisation in two contrasting agro-ecosystems is unchanged by biochar addition

    Dempster, D. N., Jones, D. L. & Murphy, D. V., May 2012, In: Soil Biology and Biochemistry. 48, p. 47-50

    Research output: Contribution to journalArticlepeer-review