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College of Science & Engineering

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  1. E-pub ahead of print

    Responses of the mesozooplankton community to marine heatwaves: challenges and solutions based on a long-term time series

    Deschamps, M., Boersma, M. & Gimenez Noya, L., 23 Aug 2024, (E-pub ahead of print) In: Journal of Animal Ecology. 93, 10, p. 1524-1540 17 p.

    Research output: Contribution to journal › Article › peer-review

  2. Published

    Coexisting cryptic species of the Litoditis marina complex (Nematoda) show differential resource use and have distinct microbiomes with high intraspecific variability

    Derycke, S., De Meester, N., Rigaux, A., Creer, S., Bik, H. M., Thomas, W. K. & Moens, T., May 2016, In: Molecular Ecology. 25, 9, p. 2093-2110

    Research output: Contribution to journal › Article › peer-review

  3. Published

    Contrasting patterns of leaf trait variation among and within species during tropical dry forest succession in Costa Rica

    Derroire, G., Powers, J., Hulshof, C., Cardenas Varela, L. & Healey, J., 2018, In: Scientific Reports. 8, 285.

    Research output: Contribution to journal › Article › peer-review

  4. Published

    Isolated trees as nuclei of regeneration in tropical pastures: testing the importance of niche-based and landscape factors

    Derroire, G., Coe, R. & Healey, J. R., 27 Jul 2016, In: Journal of Vegetation Science. 27, 4, p. 679-691

    Research output: Contribution to journal › Article › peer-review

  5. Published

    Resilience of tropical dry forests – a meta-analysis of changes in species diversity and composition during secondary succession

    Derroire, G., Balvanera, P., Castellanos-Castro, C., Decocq, G., Kennard, D. K., Lebrija-Trejos, E., Leiva, J. A., Oden, P., Powers, J. S., Rico-Gray, V., Tigabu, M. & Healey, J. R., Oct 2016, In: Oikos. 125, 10, p. 1386-1397

    Research output: Contribution to journal › Article › peer-review

  6. Published

    The Effects of Established Trees on Woody Regeneration during Secondary Succession in Tropical Dry Forests

    Derroire, G., Tigabu, M., Oden, P. C. & Healey, J. R., 1 May 2016, In: Biotropica. 48, 3, p. 290-300

    Research output: Contribution to journal › Article › peer-review

  7. Published

    Recovery rates of benthic communities following physical disturbance

    Dernie, K. M., Kaiser, M. J. & Warwick, R. M., 1 Nov 2003, In: Journal of Animal Ecology. 72, 6, p. 1043-1056

    Research output: Contribution to journal › Article › peer-review

  8. Published

    Recovery of soft sediment communities and habitats following physical disturbance.

    Dernie, K. M., Kaiser, M. J., Richardson, E. A. & Warwick, R. M., 12 Feb 2003, In: Journal of Experimental Marine Biology and Ecology. 285, p. 415-434

    Research output: Contribution to journal › Article › peer-review

  9. Published

    Assessment of Cytoplasm Conductivity by Nanosecond Pulsed Electric Fields

    Denzi, A., Merla, C., Palego, C., Paffi, A., Ning, Y. Q., Multari, C. R., Cheng, X. H., Apollonio, F., Hwang, J. C. & Liberti, M., 4 Feb 2015, In: IEEE Transactions on Biomedical Engineering. 62, 6, p. 1595-1603

    Research output: Contribution to journal › Article › peer-review

  10. Published

    Cell detection and discrimination by a microfluidic-integrated broadband microchamber

    Denzi, A., Apollonio, F., Liberti, M., Merla, C., Ning, Y., Multari, C. & Palego, C., 5 Oct 2014, p. 695-698.

    Research output: Contribution to conference › Paper

  11. Published

    Microdosimetric model of a single cell for nanosecond pulsed electric fields: an experimental method of validation

    Denzi, A., Merla, C., Palego, C., Ning, Y., Apollonio, F., Hwang, J. M. & Liberti, M., 13 Jun 2013.

    Research output: Contribution to conference › Paper

  12. Published

    Single Cell Microdosimetric Studies Comparing Ideal and Measured Nanosecond Pulsed Electric Fields

    Denzi, A., Merla, C., Palego, C., Apollonio, F., Hwang, J. C. & Liberti, M., 2 Jun 2013.

    Research output: Contribution to conference › Paper

  13. Published

    Assessment of cytoplasm conductivity of a single cell using nsPEF

    Denzi, A., Merla, C., Palego, C., Paffi, A., Ning, Y., Multari, C., Cheng, X., Apollonio, F. & Hwang J. Liberti, M., 5 Jul 2014.

    Research output: Contribution to conference › Paper

  14. Published

    An improvement method of estimation for cell cytoplasm conductivity using nanosecond pulsed electric fields: coupling of a microdosimetric model with experiments for a single cell

    Denzi, A., Merla, C., Palego, C., Ning, Y., Multari, C., Cheng, F., Apollonio, F. & Liberti, M., 1 Jun 2014.

    Research output: Contribution to conference › Paper

  15. Published

    Biological versus abiotic oxidation of iron in acid mine drainage waters: an important role for moderately acidophilic, iron-oxidising bacteria.

    Dennison, F., Johnson, D. B., Sen, A. M., Hallberg, K. B., Ciminelli, V. S. (Editor) & Garcia Jr, O. (Editor), 1 Jan 2001, Biohydrometallurgy: Fundamentals: Technology and Sustainable Development. 2001 ed. Elsevier, p. 493-501

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  16. Published

    Intramolecular guanidine epoxide ring opening reactions.

    Dennis, M., Hall, L. M., Murphy, P. J., Thornhill, A. J., Nash, R., Winters, A. L., Hursthouse, M. B., Light, M. E. & Horton, P., 7 Apr 2003, In: Tetrahedron Letters. 44, 15, p. 3075-3080

    Research output: Contribution to journal › Article › peer-review

  17. Published

    Identification of Armillaria species on declined oak in Britain: implications for oak health

    Denman, S., Barrett, G., Kirk, S. A., McDonald, J. & Coetzee, M. P. A., 7 Jan 2017, In: Forestry. 90, 1, p. 148-161

    Research output: Contribution to journal › Article › peer-review

  18. Published

    Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline

    Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S. A., Scarlett, K., Griffiths, A., Kaczmarek, M., Foster, J., Peace, A., Golyshin, P., Hassard, F., Brown, N., Kenny, J. G. & McDonald, J., 2018, In: The ISME Journal. 12, p. 386-399

    Research output: Contribution to journal › Article › peer-review

  19. Published

    Isolation studies reveal a shift in the cultivable microbiome of oak affected with Acute Oak Decline

    Denman, S., Plummer, S., Peace, A. & McDonald, J., 1 Oct 2016, In: Systematic and Applied Microbiology. 39, 7, p. 484-490

    Research output: Contribution to journal › Article › peer-review

  20. Published

    Comparison and Standardization of Soil Enzyme Assay for Meaningful Data Interpretation

    Deng, S., Dick, R., Freeman, C., Kandeler, E. & Weintraub, M., Feb 2017, In: Journal of Microbiological Methods. 133, February, p. 32-34

    Research output: Contribution to journal › Article › peer-review

  21. Published

    Experimental demonstrations of 30Gb/s/λ digital orthogonal filtering-multiplexed multiple channel transmissions over IMDD PON systems utilizing 10G-class optical devices

    Deng, M., Sankoh, A., Giddings, R. & Tang, J., 25 Sept 2017, In: Optics Express. 25, 20, p. 24251-24261

    Research output: Contribution to journal › Article › peer-review

  22. Published

    Self-seeding-based 10Gb/s over 25km optical OFDM transmissions utilizing face-to-face dual-RSOAs at gain saturation

    Deng, M., Ling, Y., Chen, X., Giddings, R., Hong, Y., Yi, X. W., Qiu, K. & Tang, J., 19 May 2014, In: Optics Express. 22, 10, p. 11954-11965

    Research output: Contribution to journal › Article › peer-review

  23. Published

    Integrating blue: How do we make nationally determined contributions work for both blue carbon and local coastal communities?

    Dencer-Brown, A., Shilland, R., Friess, D. A., Herr, D., Benson, L., Berry, N., Cifuentes-Jara, M., Colas, P., Damayanti, E., Lopez Garcia, E., Gavaldao, M., Grimsditch, G., Hejnowicz, A. P., Howard, J., Islam, S. T., Kennedy, H., Kivugo, R. R., Lang'at, J. K. S., Lovelock, C. E., Malleson, R., Macreadie, P. I., Andrade-Medina, R., Mohamed, A., Pidgeon, E., Ramos, J., Rosette, M., Salim, M. M., Schoof, E., Talukder, B., Thomas, T., Vanderklift, M. A. & Huxham, M., 1 Sept 2022, In: AMBIO. 51, 9, p. 1978-1993 16 p.

    Research output: Contribution to journal › Article › peer-review

  24. Published

    Alcanivorax borkumensis produces an extracellular siderophore in iron-limitation condition maintaining the hydrocarbon-degradation efficiency

    Denaro, R., Crisafi, F., Russo, D., Genovese, M., Messina, E., Genovese, L., Carbone, M., Ciavatta, M. L., Ferrer, M., Golyshin, P. & Yakimov, M. M., 1 Oct 2014, In: Marine Genomics. 17, October, p. 43-52

    Research output: Contribution to journal › Article › peer-review

  25. Published

    Clay and biochar amendments decreased inorganic but not dissolved organic nitrogen leaching in soil

    Dempster, D. N., Jones, D. L. & Murphy, D. V., 25 May 2012, In: Soil & Tillage Research. 50, 3, p. 216-221

    Research output: Contribution to journal › Article › peer-review

  26. Published

    Organic nitrogen mineralisation in two contrasting agro-ecosystems is unchanged by biochar addition

    Dempster, D. N., Jones, D. L. & Murphy, D. V., May 2012, In: Soil Biology and Biochemistry. 48, p. 47-50

    Research output: Contribution to journal › Article › peer-review

  27. Published

    Decreased soil microbial biomass and nitrogen mineralisation with Eucalyptus biochar addition to a coarse textured soil

    Dempster, D. N., Gleeson, D. B., Solaiman, Z. M. & Jones, D. L., May 2012, In: Plant and Soil. 354, 1-2, p. 311-324

    Research output: Contribution to journal › Article › peer-review

  28. Published

    Comparison of harvested rate and nacre deposition parameters between cultured pearls issued from initial graft and second nucleus insertion in P. margaritifera

    Demmer, J., Cabral, P. & Ky, C.-L., 1 Oct 2016, In: Aquaculture Research. 47, 10

    Research output: Contribution to journal › Article › peer-review

  29. Published

    Larval dispersal from an energetic tidal channel and implications for blue mussel (Mytilus edulis) shellfisheries

    Demmer, J., Neill, S., Andres, O., Malham, S., Jones, T. & Robins, P., 1 Dec 2022, In: Aquaculture International. 30, 6, p. 2969-2995

    Research output: Contribution to journal › Article › peer-review

  30. Published

    Evidence of potential synergy between aquaculture and offshore renewable energy

    Demmer, J., Lewis, M., Robins, P. & Neill, S., 30 Sept 2022, In: International Marine Energy Journal. 5, 2

    Research output: Contribution to journal › Article › peer-review

  31. Published

    The role of wind in controlling the connectivity of blue mussels (Mytilus edulis L.) populations

    Demmer, J., Robins, P., Malham, S., Lewis, M., Owen, A., Jones, T. & Neill, S., 21 Jan 2022, In: Movement Ecology. 10, 1, 3.

    Research output: Contribution to journal › Article › peer-review

  32. Published

    The behavioural response of benthic scavengers to otter trawling disturbance in the Mediterranean

    Demestre, M., Sanchez, P., Kaiser, M. J., Kaiser, M. J. (Editor) & De Groot, S. J. (Editor), 1 Jan 2000, The effects of trawling on non–target species and habitats: biological: conservation and socio–economic issues. 2000 ed. Blackwell Science, p. 121-129

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  33. Published

    Dve formy vnekletochnoĭ nizkomolekuliarnoĭ ribonukleazy Bacillus sp. BCF 247. Vydelenie i kharakteristika belka

    Dement'ev, A. A., Golyshin, P. N., Riabchenko, N. F., Pustobaev, V. N. & Shliapnikov, S. V., Aug 1993, In: Biokhimiia (Moscow, Russia). 58, 8, p. 1258-65 8 p.

    Research output: Contribution to journal › Article › peer-review

  34. Published

    Vnekletochnaia shchelochnaia ribonukleaza Bacillus thuringiensis var. subtoxicus

    Dement'ev, A. A., Riabchenko, N. F., Protasevich, I. I., Golyshin, P. N., Stepanov, A. I., Orlov, V. M., Pustovaev, V. N., Makarov, A. A., Moiseev, G. P. & Karpeĭskiĭ, M. I., 1 Nov 1992, In: Molekuliarnaia biologiia. 26, 6, p. 1338-49 12 p.

    Research output: Contribution to journal › Article › peer-review

  35. Published

    Stream metabolism and the open diel oxygen method: Principles, practice, and perspectives

    Demars, B. O., Thompson, J. & Manson, J. R., Jul 2015, In: Limnology and Oceanography: Methods. 13, 7, p. 356-374

    Research output: Contribution to journal › Article › peer-review

  36. Published

    A Decision Support System for Drinking Water Production Integrating Health Risks Assessment

    Delpla, I., Monteith, D. T., Freeman, C., Haftka, J., Hermens, J., Jones, T. G., Baures, E., Jung, A. & Thomas, O., 18 Jul 2014, In: International Journal of Environmental Research and Public Health. 11, 7, p. 7354-7375

    Research output: Contribution to journal › Article › peer-review

  37. Published

    Heavy Rainfall Impacts on Trihalomethane Formation in Contrasting Northwestern European Potable Waters

    Delpla, I., Jones, T. G., Monteith, D. T., Hughes, D. D., Baures, E., Jung, A. V., Thomas, O. & Freeman, C., 10 Jul 2015, In: Journal of Environmental Quality. 44, 4, p. 1241-1251

    Research output: Contribution to journal › Article › peer-review

  38. Published

    Degradation of Hydrocarbons and Heavy Metal Reduction by Marine Bacteria in Highly Contaminated Sediments

    Dell'Anno, F., Brunet, C., van Zyl, L. J., Trindade, M., Golyshin, P., Dell'Anno, A., Ianora, A. & Sansone, C., 11 Sept 2020, In: Microorganisms . 8, 9

    Research output: Contribution to journal › Article › peer-review

  39. Published

    Microbiome enrichment from contaminated marine sediments unveils novel bacterial strains for petroleum hydrocarbon and heavy metal bioremediation

    Dell'Anno, F., van Zyl, L. J., Trindade, M., Buschi, E., Cannavacciulo, A., Pepi, M., Sansone, C., Brunet, C., Ianora, A., de Pascale, D., Golyshin, P., Dell'Anno, A. & Rastelli, E., 15 Jan 2023, In: Environmental Pollution. 317, 120772.

    Research output: Contribution to journal › Article › peer-review

  40. Published

    pCO2 dynamics and related air-ice CO2 fluxes during sea ice growth and decay in a Ice Tank Experiment.

    Delille, B., Thomas, D. N., Dieckmann, G. S., Papadimitriou, E., Kennedy, H., Fischer, M., Evers, K. U. & Tison, J. L., 1 Jan 2010.

    Research output: Contribution to conference › Paper

  41. Published

    The effects of logging on forest stand structure and tree communities in the area of a new nacional wildlife refuge, Costa Rica.

    Delgado, D., Finegan, B., Gormley, L., Healey, J. R., Solano, D. & Zamora, N., 1 Jan 2005.

    Research output: Contribution to conference › Paper

  42. Published

    Detection and quantification of differences in catch rates among research vessel gears and commercial vessels

    Delargy, A., Hold, N., Heney, C., Cann, R., Bhandari, K., Colvin, C., Moore, A., Lincoln, H., Hiddink, J. G. & McCarthy, I., 1 Oct 2022, In: Fisheries Research. 254, 106371, 106371.

    Research output: Contribution to journal › Article › peer-review

  43. Published

    Ant-mediated ecosystem functions on a warmer planet: effects on soil movement, decomposition and nutrient cycling

    Del Toro, I., Ribbons, R. R. & Ellison, A. M., 23 Apr 2015, In: Journal of Animal Ecology. 84, 5, p. 1233-1241

    Research output: Contribution to journal › Article › peer-review

  44. Published

    Heterozygote deficiencies and genotype-dependent spawning time in Mytilus edulis

    Del Rio-Portilla, M. A. & Beaumont, A. R., 1 Dec 2001, In: Journal of Shellfish Research. 20, 3, p. 1051-1057

    Research output: Contribution to journal › Article › peer-review

  45. Published

    Sperm concentration in the mussel Mytilus edulis L.: a spectrophotometric measurement protocol

    Del Rio-Portilla, M. A. & Beaumont, A. R., 13 Mar 2008, In: Aquaculture International. 16, 6, p. 573-580

    Research output: Contribution to journal › Article › peer-review

  46. Published

    Larval growth, juvenile size and heterozygosity in laboratory reared mussels, Mytilus edulis

    Del Rio-Portilla, M. A. & Beaumont, A. R., 1 Nov 2000, In: Journal of Experimental Marine Biology and Ecology. 254, 1, p. 1-17

    Research output: Contribution to journal › Article › peer-review

  47. Published

    Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail

    Del Pozo, M. V., Fernández-Arrojo, L., Gil-Martínez, J., Montesinos, A., Chernikova, T. N., Nechitaylo, T. Y., Waliszek, A., Tortajada, M., Rojas, A., Huws, S. A., Golyshina, O., Newbold, C. M., Polaina, J., Ferrer, M. & Golyshin, P., 12 Sept 2012, In: Biotechnology for Biofuels. 5, p. 73

    Research output: Contribution to journal › Article › peer-review

  48. Published

    Respiration in aquatic ecosystems: from single cells to the biosphere

    Del Giorgio, P. A., Williams, P. J. & Williams, P. J. (Editor), 1 Jan 2005, Respiration in Aquatic Ecosystems. 2005 ed. Oxford University Press, p. 267-303

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  49. Published

    Respiration in Aquatic Ecosystems

    Del Giorgio, P. A. (Editor) & Williams, P. J. (Editor), 1 Jan 2005, 2005 ed. Oxford University Press.

    Research output: Book/Report › Book

  50. Published

    Multilevel comparison of Indian Naja venoms and their cross-reactivity with Indian polyvalent antivenoms

    Deka, A., Bhatia, S., Santra, V., Bharti, O., Lalremsanga, H., Martin, G., Wüster, W., Owens, J. B., Graham, S., Doley, R. & Malhotra, A., 1 Apr 2023, In: Toxins. 15, 4, 24 p.

    Research output: Contribution to journal › Article › peer-review

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