College of Science & Engineering

  1. Article › Research › Peer-reviewed
  2. Published

    Meta-analysis of global livestock urine-derived nitrous oxide emissions from agricultural soils

    Lopez-Aizpun, M., Horrocks, C. A., Charteris, A. F., Marsden, K., Ciganda, V., Evans, J. R., Chadwick, D. & Cardenas, L. M., 1 Apr 2020, In: Global Change Biology. p. 2002-2013

    Research output: Contribution to journalArticlepeer-review

  3. Published

    Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT

    Golyshina, O., Hai, T., Reva, O. N., Lemak, S., Yakunin, A. F., Goesmann, A., Nechitaylo, T. Y., LaCono, V., Smedile, F., Slesarev, A., Rojo, D., Barbas, C., Ferrer, M., Yakimov, M. M. & Golyshin, P., 16 Jun 2017, In: Scientific Reports. 7, 3682.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Metabolic molecular markers of the tidal clock in the marine crustacean Eurydice pulchra

    O'Neill, J. S., Lee, K. D., Zhang, L., Feeney, K., Webster, S. G., Blades, M. J., Kyriacou, C. P., Hastings, M. H. & Wilcockson, D. C., 20 Apr 2015, In: Current Biology. p. R326-R327

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Metabolic response of oligotrophic plankton communities to deep water nutrient enrichment.

    McAndrew, P. M., Bjorkman, K. M., Church, M. J., Morris, P. J., Jachowski, N., Williams, P. J. & Karl, D. M., 5 Mar 2007, In: Marine Ecology Progress Series. 332, p. 63-75

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Metabolite Damage and Damage-Control in a Minimal Genome

    Haas, D., Thamm, A. M., Sun, J., Huang, L., Sun, L., Beaudoin, G. A. W., Wise, K. S., Lema-Ortiz, C., Bruner, S. D., Breuer, M., Luthey-Schutten, Z., Lin, J., Wilson, M. A., Brown, G., Yakunin, A., Kurilyak, I., Folz, J., Fiehn, O., Glass, J. I., Hanson, A. D., Henry, C. S. & de Crecy-Lagard, V., 30 Aug 2022, In: mBio. e0163022.

    Research output: Contribution to journalArticlepeer-review

  7. Published

    Metabolomics and dereplication strategies in the discovery of natural product derived drugs

    Tawfike, A., Tawfike, A. F., Tawfik, N. & Edrada-Ebel, R., 1 Nov 2015, In: Planta Medica. 81, 16, p. 1403-1404

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Metagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes

    Fonseca, V. G., Carvalho, G. R., Nichols, B., Quince, C., Johnson, H. F., Neill, S. P., Lambshead, J. D., Thomas, W. K., Power, D. M. & Creer, S., 25 Aug 2014, In: Global Ecology and Biogeography. 23, 11, p. 1293–1302

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Metagenomic Mining for Esterases in the Microbial Community of Los Rueldos Acid Mine Drainage Formation

    Vidal, P., Martinez-Martinez, M., Fernandez-Lopez, L., Roda, S., Mendez-Garcia, C., Golyshina, O., Guallar, V., Pelaez, A. I. & Ferrer, M., 19 May 2022, In: Frontiers in Microbiology. 13

    Research output: Contribution to journalArticlepeer-review

  10. Published

    Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

    Smedile, F., Messina, E., La Cono, V., Tsoy, O., Monticelli, L. S., Borghini, M., Giuliano, L., Golyshin, P. N., Mushegian, A. & Yakimov, M. M., 1 Jan 2013, In: Environmental Microbiology. 15, 1, p. 167-182

    Research output: Contribution to journalArticlepeer-review

  11. Published

    Metagenomic approaches to the discovery of cellulases

    Rooks, D. J., McDonald, J. E. & McCarthy, A. J., 2012, In: Methods in Enzymology. 510, p. 375-94 20 p.

    Research output: Contribution to journalArticlepeer-review

  12. Published

    Metagenomic covariation along densely sampled environmental gradients in the Red Sea

    Thompson, L. R., Williams, G., Haroon, M. F., Shibl, A., Larsen, P., Shorenstein, J., Knight, R. & Stingl, U., Jan 2017, In: ISME Journal. 11, p. 138-151

    Research output: Contribution to journalArticlepeer-review

  13. Published

    Metagenomics approaches in Systems Microbiology.

    Golyshin, P., Vieities, J. M., Guazzaroni, M. E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 1 Jan 2009, In: FEMS Microbiology Reviews. 33, 1, p. 236-255

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Metagenomics as a new technological tool to gain scientific knowledge.

    Guazzaroni, M. E., Beloqui, A., Golyshin, P. N. & Ferrer, M., 1 Jun 2009, In: World Journal of Microbiology and Biotechnology. 25, 6, p. 945-954

    Research output: Contribution to journalArticlepeer-review

  15. Published

    Metagenomics for Mining New Genetic Resources of Microbial Communities.

    Ferrer, M., Beloqui, A., Timmis, K. N. & Golyshin, P. N., 1 Jan 2009, In: Journal of Molecular Microbiology and Biotechnology. 16, 1-2, p. 109-123

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Metal contaminated biochar and wood ash negatively affect plant growth and soil quality after land application

    Jones, D. L. & Quilliam, R. S., 15 Jul 2014, In: Journal of Hazardous Materials. 276, p. 362-370

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Metal pollution as a potential threat to shell strength and survival in marine bivalves.

    Stewart, B. D., Jenkins, S., Boig, C., Sinfield, C., Kennington, K., Brand, A., Lart, W. & Kroger, R., 10 Feb 2021, In: Science of the Total Environment. 755, 143019.

    Research output: Contribution to journalArticlepeer-review

  18. E-pub ahead of print

    Metallic protection of soil carbon: Divergent drainage effects in Sphagnum vs. non-Sphagnum wetlands

    Liu, C., Zhao, Y., Ma, L., Zhai, G., Li, X., Freeman, C. & Feng, X., 20 May 2024, (E-pub ahead of print) In: National Science Review. p. nwae178

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Metamorphic common toads keep chytrid infection under control, but at a cost

    Kásler, A., Ujszegi, J., Holly, D., Üveges, B., Móricz, Á. M., Herczeg, D. & Hettyey, A., 1 Jul 2022, In: Journal of Zoology. 317, 3, p. 159-169 10 p.

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Metamorphosis of a sesarmid river crab, Armases roberti: stimulation by adult odours vs. inhibition by salinity stress.

    Anger, K., Torres, G. & Gimenez, L., 1 Dec 2006, In: Marine and Freshwater Behaviour and Physiology. 39, 4, p. 269-278

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

    Bargiela, R., Herbst, F. A., Martinez-Martinez, M., Seifert, J., Rojo, D., Cappello, S., Genovese, M., Crisafi, F., Denaro, R., Chernikova, T. N., Barbas, C., von Bergen, M., Yakimov, M. M., Ferrer, M. & Golyshin, P. N., 27 Aug 2015, In: Proteomics. 15, 20, p. 3508-3520

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Metazoan parasites of the lesser-spotted dogfish Scyliorhinus canicula and their potential as stock discrimination tools

    Moore, A., Dec 2001, In: Journal of the Marine Biological Association of the United Kingdom. 81, 6, p. 1009-1013

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Meters, kilograms, seconds, but no bomb units. A zero tolerance approach to units (with apologies to Lynne Truss).

    Williams, P. J., 1 Jun 2004, In: Limnology and Oceanography Bulletin. 13, 2, p. 29-32

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Methane, carbon dioxide and nitrous oxide fluxes from a temperate salt marsh: Grazing management does not alter Global Warming Potential

    Ford, H., Garbutt, A., Jones, L. & Jones, D., 10 Nov 2012, In: Estuarine, Coastal and Shelf Science. 113, p. 182-191

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Method for predicting fT for carbon nanotube FETs.

    Castro, L. C., John, D. L., Pulfrey, D. L., Pourfath, M., Gehring, A. & Kosina, H., 1 Nov 2005, In: IEEE Transactions On Nanotechnology. 4, 6, p. 699-704

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Methoden zur Reproduktion und Fortschreibung einzelner konzentrischer Probekreise von Betriebs- und Landeswaldinventuren.

    Pommerening, A., 1 May 2000, In: Forstarchiv. 71, 5, p. 190-199

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Methodological bias associated with soluble protein recovery from soil

    Greenfield, L., Hill, P., Paterson, E., Baggs, L. & Jones, D. L., 25 Jul 2018, In: Scientific Reports. 8, 11186 (2018).

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Methodological complexities of product carbon footprinting: a sensitivity analysis of key variables in a developing country context.

    Plassmann, K., Norton, A., Attarzadeh, N., Jensen, M. P., Brenton, P. & Edwards-Jones, G., 1 Aug 2010, In: Environmental Science and Policy. 13, 5, p. 393-404

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Methodological confounds of measuring urinary oxidative stress in wild animals

    Melvin, Z., Dhirani, H., Mitchell, C., Davenport, T., Blount, J. & Georgiev, A. V., 17 Jul 2022, In: Ecology and Evolution. 12, 7, e9115.

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Methodological considerations when using local knowledge to infer spatial patterns of resource exploitation

    Shepperson, J. L., Murray, L. G., Cook, S., Whiteley, H. & Kaiser, M. J., 30 Oct 2014, In: Biological Conservation. 180, p. 214-223

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Methodologies for Extracellular Enzyme Assays from Wetland Soils

    Dunn, C., Jones, T. G., Girard, A. & Freeman, C., 1 Feb 2014, In: Wetlands. 34, 1, p. 9-17

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Methods for Measuring Frost Tolerance of Conifers: A Systematic Map

    Atucha Zamkova, A-A., Steele, K. & Smith, A., 16 Aug 2021, In: Forests.

    Research output: Contribution to journalArticlepeer-review

  33. Published

    Methods for biogeochemical studies of Sea Ice: The State of the art, caveats and recommendations

    Miller, L. A., Fripiat, F., Else, B. G. T., Bowman, J. S., Brown, K. A., Collins, R. E., Ewert, M., Fransson, A., Gosselin, M., Lannuzel, D., Meiners, K. M., Michel, C., Nishioka, J., Nomura, D., Papadimitriou, S., Russell, L. M., Sørensen, L. L., Thomas, D. N., Tison, J-L., van Leeuwe, M. A., Vancoppenolle, M., Wolff, E. W. & Zhou, J., 23 Jan 2015, In: Elementa: Science of the Anthropocene. 000038.

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Methods for estimating root biomass and production in forest and woodland ecosystem carbon studies: A review

    Addo-Danso, S. D., Prescott, C. E. & Smith, A. R., 9 Sept 2015, In: Forest Ecology and Management. 359, p. 332-351

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Methods for medium-term prediction of the net sediment transport by waves and currents in complex coastal regions.

    Brown, J. M. & Davies, A. G., 15 Jun 2009, In: Continental Shelf Research. 29, 11-12, p. 1502-1514

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Methods for predicting Sitka spruce natural regeneration presence and density in the UK

    Bianchi, S., Hale, S. & Gibbons, J., May 2019, In: iForest. 12, p. 279-288

    Research output: Contribution to journalArticlepeer-review

  37. Published

    Methods for the isolation of cellulose-degrading microorganisms

    McDonald, J. E., Rooks, D. J. & McCarthy, A. J., 2012, In: Methods in Enzymology. 510, p. 349-74 26 p.

    Research output: Contribution to journalArticlepeer-review

  38. Published

    Methylorosula polaris gen. nov., sp. nov., an aerobic, facultatively methylotrophic psychrotolerant bacterium from tundra wetland soil

    Golyshin, P., Berestovskaya, J. J., Kotsyurbenko, O. R., Tourova, T. P., Kolganova, T. V., Doronina, N. V., Golyshin, P. N. & Vasilyeva, L. V., 1 Mar 2012, In: International Journal of Systematic Evolutionary Microbiology. 62, Pt 3, p. 638-646

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Metrics and methods for characterizing dairy farm intensification using farm survey data

    Gonzalez Mejia, A., Styles, D., Wilson, P. & Gibbons, J., 9 May 2018, In: PLoS ONE. 13, 5, e0195286.

    Research output: Contribution to journalArticlepeer-review

  40. Published

    Mg in aragonitic bivalve shells: Seasonal variations and mode of incorporation in Arctica islandica.

    Foster, L. C., Finch, A. A., Allison, N., Andersson, C. & Clarke, L. J., 1 Aug 2008, In: Chemical Geology. 254, 1-2, p. 113-119

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Mg/Ca, Sr/Ca, and stable-isotope (δ18O and δ13C) ratio profiles from the fan mussel Pinna nobilis: Seasonal records and temperature relationships.

    Freitas, P., Clarke, L. J., Kennedy, H. A., Richardson, C. A. & Abrantes, F., 12 Apr 2005, In: Geochemistry Geophysics Geosystems. 6, p. Q04D14

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Michael and substitution reactions of bicyclic tetronic, tetramic and thiotetronic esters

    Bertucco, A., Brennan, J., Fachini, M., Kluge, S., J. Murphy, P., Pasutto, F., Signorini, R. & Lloyd Williams, H., 1994, In: Tetrahedron. 50, 27, p. 8237-8252 16 p.

    Research output: Contribution to journalArticlepeer-review

  43. Published

    Micro NiTi-Si cantilever with three stable positions.

    Liu, Q., Huang, W. M., Liu, Q. Y., He, L. M. & Yeo, J. H., 20 Aug 2004, In: Sensors and Actuators A - Physical. 114, 1, p. 118-122

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Micro- and macrogeographic genetic structure in bryozoans with different larval strategies.

    Porter, J. S., Ryland, J. S. & Carvalho, G. R., 24 Jun 2002, In: Journal of Experimental Marine Biology and Ecology. 272, 2, p. 119-130

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Micro- and meso-scale variability in sediment activity concentrations: the implications for dose assessment

    Assinder, D. J., Mudge, S. M. & Russell, A. T., 1 May 2005, In: Radioprotection. 40, Supplement 1, p. S569-573

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Micro-optodes in a sea ice: A new approach to investigate oxygen dynamics during sea ice formation.

    Mock, T., Dieckmann, G. S., Haas, C., Tison, J. L., Krell, A., Belem, A. L., Papadimitriou, S. & Thomas, D. N., 23 Oct 2002, In: Aquatic Microbial Ecology. 29, 3, p. 297-306

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Micro-scale geochemical and crystallographic analysis of Buccinum undatum statoliths supports an annual periodicity of growth ring deposition

    Hollyman, P., Chenery, S., Ignatyev, C., Laptikhovsky, V. & Richardson, C., 5 Nov 2019, In: Chemical Geology. 526, p. 153-164 30 p.

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Micro-structure Parameter Optimize Design of Short-fiber/whisker Reinforced Composite

    Liu, Q., Li, M., Liu, Q. Y., Liu, X. Y. & Liang, N. G., 1 Jan 2001, In: Chinese Journal of Aeronautics. 14, 3, p. 147-154

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Microalgal community structure and primary production in Arctic and Antarctic sea ice: A synthesis.

    van Leeuwe, M., Tedesco, L., Arrigo, K. R., Assmy, P., Meiners, K. M., Rintala, J-M., Selz, V., Thomas, D. N. & Stefels, J., 11 Jan 2018, In: Elementa: Science of the Anthropocene. 6, 4, 25 p.

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

    Graham, E. B., Knelman, J. E., Schindlbacher, A., Siciliano, S., Breulmann, M., Yannarell, A., Bemans, J. M., Abell, G., Philippot, L., Prosser, J., Foulquier, A., Yuste, J. C., Glanville, H. C., Jones, D., Angel, F., Salminen, J., Newton, R. J., Buergmann, H., Ingram, L. J., Hamer, U., Siljanen, H. M. P., Peltoniemi, K., Potthast, K., Baneras, L., Hartmann, M., Banerjee, S., Yu, R-Q., Nogaro, G., Richter, A., Koranda, M., Castle, S. C., Goberna, M., Song, B., Chatterjee, A., Nunes, O. C., Lopes, A. R., Cao, Y., Kaisermann, A., Hallin, S., Strickland, M. S., Garcia-Pausas, J., Barba, J., Kang, H., Isobe, K., Papaspyrou, S., Pastorelli, R., Lagomarsino, A., Lindstrom, E. S., Basiliko, N. & Nemergut, D. R., 24 Feb 2016, In: Frontiers in Microbiology. 7

    Research output: Contribution to journalArticlepeer-review

  51. Published

    Microbial Communities in Sediments in Acidic, Metal-Rich Mine Lakes: Results from a Study in South-West Spain

    Falagan Rodriguez, C., Sánchez-España, F. J., Yusta, I. & Johnson, D. B., Nov 2015, In: Advanced Materials Research. 1130, p. 7-10

    Research output: Contribution to journalArticlepeer-review