College of Science & Engineering

  1. Published

    Force Penetration of Chiba Needles for Haptic Rendering in Ultrasound Guided Needle Puncture Training Simulator

    Vidal, F. P., Healey, A. E., John, N. W. & Gould, D. A., 1 Jan 2008.

    Research output: Contribution to conferencePaper

  2. Published

    Experimental microCT and high-fidelity simulations: Towards quantitative imaging in the case of strong artefacts

    Vidal, F., Mitchell, I., Buffière, J-Y. & Letang, J. M., Jun 2022.

    Research output: Contribution to conferenceAbstractpeer-review

  3. Published

    Developing An Immersive Ultrasound Guided Needle Puncture Simulator

    Vidal, F. P., Villard, P-F., Holbrey, R., John, N. W., Bello, F., Bulpitt, A. & Gould, D. A., 1 Jan 2009, Proceeding of Medicine Meets Virtual Reality 17 (MMVR17). Long Beach, California: IOS Press, Vol. 142. p. 398-400 3 p. (Studies in Health Technology and Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  4. Published

    Interactive Physically-based X-ray simulation: CPU or GPU?

    Vidal, F. P., John, N. W. & Guillemot, R. M., 1 Feb 2007, Proceeding of Medicine Meets Virtual Reality 15 (MMVR15). Long Beach, California: IOS Press, Vol. 125. p. 479-481 3 p. (Studies in Health Technology and Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  5. Published

    Developing a needle guidance virtual environment with patient specific data and force feedback

    Vidal, F. P., Chalmers, N., Gould, D. A., Healey, A. E. & John, N. W., May 2005, Proceeding of the 19th International Congress of Computer Assisted Radiology and Surgery (CARS'05). Berlin, Germany: Elsevier, Vol. 1281. p. 418-423 6 p. (International Congress Series).

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  6. Published

    Visualisation of PET data in the Fly Algorithm

    Vidal, F. P., Abbood, Z. A. & Rocchisani, J. M., 14 Sept 2015.

    Research output: Contribution to conferencePaper

  7. Published

    Principles and applications of computer graphics in medicine.

    Vidal, F. P., Bello, F., Brodlie, K. W., John, N. W., Gould, D., Phillips, R., Avis, N. J. & Hirsch, T., 1 Jan 2006, In: Computer Graphics Forum. 25, 1, p. 113-137

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Metagenomic Mining for Esterases in the Microbial Community of Los Rueldos Acid Mine Drainage Formation

    Vidal, P., Martinez-Martinez, M., Fernandez-Lopez, L., Roda, S., Mendez-Garcia, C., Golyshina, O., Guallar, V., Pelaez, A. I. & Ferrer, M., 19 May 2022, In: Frontiers in Microbiology. 13

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Modelling the response of x-ray detectors and removing artefacts in 3D tomography

    Vidal, F., Sept 2003, Institut National des Sciences Appliquées de Lyon.

    Research output: Other contributionpeer-review

  10. Published

    GPU Accelerated DRR Computation with Scatter

    Vidal, F. P., Folkerts, M., Freud, N. & Jiang, S., 1 Jul 2011, In: Medical Physics. 38, 6, p. 3455-3456 2 p.

    Research output: Contribution to journalArticlepeer-review

  11. Published

    ImaGINe-S: Imaging Guided Interventional Needle Simulation

    Vidal, F. P., Garnier, M., Freud, N., Létang, J. M. & John, N. W., 1 May 2010, Eurographics 2010 - Poster. Norrk"oping, Sweden: The Eurographics Association, p. Poster 5011

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  12. Published

    New Genetic Operators in the Fly Algorithm: Application to Medical PET Image Reconstruction

    Vidal, F. P., Louchet, J., Rocchisani, J. M., Lutton, E., DeChio, C. (ed.), Cagnoni, S. (ed.), Ctta, C. (ed.), Ebner, M. (ed.), Ekárt, A. (ed.), Esparcia-Alcazar, A. I. (ed.), Goh, C. K. (ed.), Merelo, J. J. (ed.), Neri, F. (ed.), Preuß, M. (ed.), Togelius, J. (ed.) & Yannakaki, G. N. (ed.), 1 Jan 2010, Applications of Evolutionary Computation. 2010 ed. Springer Berlin Heidelberg, p. 292-301

    Research output: Chapter in Book/Report/Conference proceedingChapter

  13. Published

    Threshold Selection, Mitosis and Dual Mutation in Cooperative Co-evolution: Application to Medical 3D Tomography

    Vidal, F. P., Lutton, E., Louchet, J., Rocchisani, J. M., Schaefer, R. (ed.), Cotta, C. (ed.), Kołodziej, J. (ed.) & Rudolph, G. (ed.), 1 Jan 2010, Parallel Problem Solving from Nature: PPSN XI. 2010 ed. Springer Berlin Heidelberg, p. 14-423

    Research output: Chapter in Book/Report/Conference proceedingChapter

  14. Published

    Reconstruction in Positron Emission Tomography

    Vidal, F. P., Rocchisani, J. M., Jia, X. (ed.) & Jiang, S. B. (ed.), 30 Sept 2015, Graphics Processing Unit-based high performance computing in radiation therapy. CRC Press, p. 185-208

    Research output: Chapter in Book/Report/Conference proceedingChapter

  15. Published

    New developments in gVirtualXray since IBSim 2021

    Vidal, F., Oct 2023.

    Research output: Contribution to conferenceAbstractpeer-review

  16. Published

    Use of fast realistic simulations on GPU to extract CAD models from microtomographic data in the presence of strong CT artefacts

    Vidal, F., Mitchell, I. & Letang, J. M., 1 Mar 2022, In: Precision Engineering. 74, p. 110-125

    Research output: Contribution to journalArticlepeer-review

  17. Published

    Development and validation of real-time simulation of X-ray imaging with respiratory motion

    Vidal, F. P. & Villard, P. F., 17 Dec 2015, In: Computerized Medical Imaging and Graphics. 49, p. 1-15

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Simulation of ultrasound guided needle puncture using patient specific data with 3D textures and volume haptics

    Vidal, F., John, N. W., Healey, A. E. & Gould, D. A., 1 May 2008, In: Computer Animation and Virtual Worlds. 19, 2, p. 111-127

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Can current moisture responses predict soil CO2 efflux under altered precipitation regimes? A synthesis of manipulation experiments

    Vicca, S., Bahn, M., Estiarte, M., van Loon, E. E., Vargas, R., Alberti, G., Ambuis, P., Arain, M. A., Beier, C., Bentley, L. P., Borken, W. B., Collins, S. L., de Gato, G., Dukes, J. S., Escolar, C., Fay, P., Guidolotti, G., Hanson, P. J., Kahmen, A., Kroel-Dulay, G., Ladreiter-Knauss, T., Larsen, K. S., Lellei-Kovacs, E., Lebrija-Trejos, E., Maestre, F. T., Marhan, S., Marshall, M., Meir, P., Miao, Y., Muhr, J., Niklaus, P. A., Ogaya, R., Penuelas, J., Poll, C., Rustad, L. E., Savage, K., Schinlbacher, A., Schmidt, I. K., Smith, A. R., Sotta, E. D., Suseela, V., Tietema, A., van Gestel, N., van Straaten, O., Wan, S., Wenber, U. & Janssens, I. A., 6 Jun 2014, In: Biogeosciences. 11, 11, p. 2991-3013

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Deep-ocean mixing driven by small-scale internal tides

    Vic, C., Naveira-Garabato, A. C., Green, J. A. M., Waterhouse, A. F., Zhao, Z., Melet, A., de Lavergne, C., Buijsman, M. C. & Stephenson, G. R., 8 May 2019, In: Nature Communications. 10, 1, p. 2099 2099 (2019) .

    Research output: Contribution to journalArticlepeer-review

  21. Published

    The Lifecycle of Semidiurnal Internal Tides over the Northern Mid-Atlantic Ridge

    Vic, C., Naveira-Garabato, A., Green, M., Spingys, C., Forryan, A., Zhao, Z. & Sharples, J., Jan 2018, In: Journal of Physical Oceanography. 48, 1, p. 61-80

    Research output: Contribution to journalArticlepeer-review

  22. Published

    Redox induced orientational changes in a series of short chain ferrocenyl alkyl thiols self-assembled on gold (1 1 1) electrodes

    Viana, A. S., Jones, A. H., Abrantes, L. M. & Kalaji, M., 16 Mar 2001, In: Journal of Electroanalytical Chemistry. 500, 1-2, p. 290-298

    Research output: Contribution to journalArticlepeer-review

  23. Published

    Electrochemical quartz crystal microbalance study of self-assembled monolayers and multilayers of ferrocenylthiol derivatives on gold

    Viana, A. S., Kalaji, M. & Abrantes, L. M., 28 Oct 2003, In: Langmuir. 19, 22, p. 9542-9544

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Electrochemical, spectroscopic and SPM evidence for the controlled formation of self-assembled monolayers and organised multilayers of ferrocenyl alkyl thiols on Au (111)

    Viana, A. S., Abrantes, L. M., Jin, G., Floate, S., Nichols, R. J. & Kalaji, M., 1 Jan 2001, In: Physical Chemistry Chemical Physics. 3, 16, p. 3411-3419

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Self-assembled monolayers of Vitamin B12 disulphide derivatives on gold.

    Viana, A. S., Kalaji, M. & Abrantes, L. M., 1 Mar 2002, In: Electrochimica Acta. 47, 10, p. 1587-1594

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Ocean-related options for climate change mitigation and adaptation: A machine learning-based evidence map protocol

    Veytia, D., Airoldi, L., Paris, PSL., Cooley, S., Magnan, A., Marti, V., Neill, S., Sumaila, R., Thebaud, O., Voolstra, C., Williamson, P., Bonin, M., Langridge, J., Comte, A., Viard, F., Shin, Y., Bopp, L. & Gattuso, J-P., 1 Feb 2024, In: Protocol Exchange.

    Research output: Contribution to journalArticle

  27. Published

    Preparation and immunogenicity of gold glyco-nanoparticles as antipneumococcal vaccine model

    Vetro, M., Safari, D., Fallarini, S., Salsabila, K., Lahmann, M., Penades, S., Lay, L., Marradi, M. & Compostella, F., Jan 2017, In: Nanomedicine. 12, 1

    Research output: Contribution to journalArticlepeer-review

  28. Published

    Combined control of bottom and turbidity currents on the origin and evolution of channel systems, examples from the Porcupine Seabight.

    Verweirder, L., Van Rooij, D., White, M., Van Landeghem, K., Bossée, K. & Georgiopoulou, A., 1 Dec 2021, In: Marine Geology. 442, 106639.

    Research output: Contribution to journalArticlepeer-review

  29. Published

    Semi-diurnal tidal ellipse variability in a region of freshwater influence

    Verspecht, F., Simpson, J. H. & Rippeth, T. P., 1 Sept 2010, In: Geophysical Research Letters. 37, 18, p. 1-4

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Residual circulation and stratification in the Liverpool Bay region of freshwater influence.

    Verspecht, F., Rippeth, T. P., Simpson, J. H., Souza, A. J., Burchard, H. & Howarth, M. J., 1 Nov 2009, In: Ocean Dynamics. 59, 5, p. 765-779

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Processes impacting on stratification in a region of freshwater influence: Application to Liverpool Bay

    Verspecht, F., Rippeth, T. P., Howarth, M. J., Souza, A. J., Simpson, J. H. & Burchard, H., 1 Nov 2009, In: Journal of Geophysical Research: Oceans. 114, p. C11022

    Research output: Contribution to journalArticlepeer-review

  32. Published

    Sugar concentrations along and across the Ricinis communis L. hypocotyls measured by single cell sampling analysis.

    Verscht, J., Tomos, A. D. & Komor, E., 1 Nov 2006, In: Planta. 224, 6, p. 1303-1314

    Research output: Contribution to journalArticlepeer-review

  33. Published

    Towards understanding the functional diversity of cell wall mycolic acids of Mycobacterium tuberculosis

    Verschoor, J. A., Baird, M. S. & Grooten, J., 1 Oct 2012, In: Progress in Lipid Research. 51, 4, p. 325-339

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Mapping epigenetic divergence in the massive radiation of Lake Malawi cichlid fishes

    Vernaz, G., Malinsky, M., Svardal, H., Du, M., Tyers, A. M., Santos, M. E., Durbin, R., Genner, M. J., Turner, G. F. & Miska, E. A., 7 Oct 2021, In: Nature Communications. 12, 1, 5870.

    Research output: Contribution to journalArticlepeer-review

  35. Published

    Epigenetic divergence during early stages of speciation in an African crater lake cichlid fish

    Vernaz, G., Hudson, A. G., Santos, M. E., Fischer, B., Carruthers, M., Shechonge, A. H., Gabagambi, N. P., Tyers, A. M., Ngatunga, B. P., Malinsky, M., Durbin, R., Turner, G. F., Genner, M. J. & Miska, E. A., Dec 2022, In: Nature Ecology and Evolution. 6, 12, p. 1940-1951 12 p.

    Research output: Contribution to journalArticlepeer-review

  36. Published

    Mycolates of Mycobacterium tuberculosis modulate the flow of cholesterol for bacillary proliferation in murine macrophages

    Vermeulen, I., Baird, M., Al-Dulayymi, J., Smet, M., Verschoor, J. & Grooten, J., 1 Apr 2017, In: Journal of Lipid Research. 58, 4, p. 709-718 9 p.

    Research output: Contribution to journalArticlepeer-review

  37. Published

    An Enhanced Single-Phase Self-Tuning Filter based Open-Loop Frequency Estimator for Weak Grid

    Verma, A. K., Ahmed, H., Roncero-Sánchez, P. & Chaturvedi, P., 16 Nov 2021, 2021 IEEE Energy Conversion Congress and Exposition (ECCE). IEEE, p. 1020 1025 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

  38. Published

    A Robust Half-Cycle Single-Phase Prefiltered Open-Loop Frequency Estimator for Fast Tracking of Amplitude and Phase

    Verma, A. K., Roncero-Sánchez, P., Ahmed, H., Elghali, S. B. & Busarello, T. D. C., 2 Mar 2022, In: IEEE Transactions on Instrumentation and Measurement . 71

    Research output: Contribution to journalArticlepeer-review

  39. Published

    Contributions of a global network of tree diversity experiments to sustainable forest plantations

    Verheyen, K., Vanhellemont, M., Auge, H., Baeten, L., Baraloto, C., Barsoum, N., Bilodeau-Gauthier, S., Bruelheide, H., Castagneyrol, B., Godbold, D., Haase, J., Hector, A., Jactel, H., Koricheva, J., Loreau, M., Mereu, S., Messier, C., Muys, B., Nolet, P., Paquette, A., Parker, J., Perring, M., Ponette, Q., Potvin, C., Reich, P., Smith, A. R., Weih, M. & Scherer-Lorenzen, M., 12 Aug 2015, In: AMBIO. 45, 1, p. 29-41

    Research output: Contribution to journalArticlepeer-review

  40. E-pub ahead of print

    Heterogeneous microgeographic genetic structure of the common cockle (Cerastoderma edule) in the Northeast Atlantic Ocean: biogeographic barriers and environmental factors

    Vera, M., Wilmes, S-B., Maroso, F., Hermida, M., Blanco, A., Casanova, A., Iglesias, D., Cao, A., Culloty, S. C., Mahony, K., Orvain, F., Bouza, C., Robins, P., Malham, S., Lynch, S., Antonio, V. & Martínez, P., 18 Aug 2023, (E-pub ahead of print) In: Heredity.

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Genomic survey of edible cockle (Cerastoderma edule) in the Northeast Atlantic: a baseline for sustainable management of its wild resources.

    Vera, M., Maroso, F., Wilmes, S-B., Malham, S., Groves, E., Hermida, M., Blanco, A., Fernandez, C., Bouza, C., Martinez, P. & Robins, P., 24 Feb 2022, In: Evolutionary Applications. 15, 2, p. 262-285 24 p.

    Research output: Contribution to journalArticlepeer-review

  42. Published

    A functional dosage compensation complex required for male killing in Drosophila.

    Veneti, Z., Bentley, J. K., Koana, T., Braig, H. R. & Hurst, G. D., 4 Mar 2005, In: Science. 307, 5714, p. 1461-1463

    Research output: Contribution to journalArticlepeer-review

  43. Published

    The morphology and electrical conductivity of single-wall carbon nanotube thin films prepared by the Langmuir-Blodgett technique.

    Venet, C., Pearson, C., Jombert, A. S., Mabrook, M. F., Zeze, D. A. & Petty, M. C., 5 Feb 2010, In: Colloids and Surfaces A: Physicochemical and Engineering Aspects. 354, 1-3, p. 113-117

    Research output: Contribution to journalArticlepeer-review

  44. Published

    Tracing a toad invasion: lack of mitochondrial DNA variation, haplotype origins, and potential distribution of introduced Duttaphrynus melanostictus in Madagascar

    Vences, M., Brown, J. L., Lathrop, A., Gonçalo, R. M., Cameron, A., Crottini, A., Dolch, R., Edmonds, D., Freeman, K. L. M., Glaw, F., Grismer, L., Litvinchuk, S., Milne, M. M., Moore, M., Solofo, J. F., Noël, J., Nguyen, T. Q., Ohler, A., Randrianantoandro, C., Raselimanana, A. P., van Leeuwen, P., Wogan, G. O. U., Ziegler, T., Andreone, F. & Murphy, R. W., 2017, In: Amphibia-Reptilia. 38, 2, p. 197–207

    Research output: Contribution to journalArticlepeer-review

  45. Published

    Mitochondrial DNA analyses reveal widespread tardigrade diversity in Antarctica

    Velasco-Castrillon, A., McInnes, S. J., Schultz, M. B., Arroniz-Crespo, M., D'Haese, C. A., Gibson, J. A., Adams, B. J., Page, T. J., Austin, A. D., Cooper, S. J. & Stevens, M. I., 22 Dec 2015, In: Invertebrate Systematics. 29, 6, p. 578-590

    Research output: Contribution to journalArticlepeer-review

  46. Published

    Schizosaccharomyces pombe Mms1 channels repair of perturbed replication into Rhp51 independent homologous recombination

    Vejrup-Hansen, R., Mizuno, K., Miyabe, I., Fleck, O., Holmberg, C., Murray, J. M., Carr, A. M. & Nielsen, O., 7 Mar 2011, In: DNA Repair. 10, 3, p. 283–295

    Research output: Contribution to journalArticlepeer-review

  47. Published

    Precision and cost-effectiveness of bioindicators to estimate nutrient regimes on coral reefs

    Vaughan, E. J., Wynn, P. M., Wilson, S. K., Williams, G. J., Barker, P. A. & Graham, N. A. J., Sept 2021, In: Marine Pollution Bulletin. 170, 112606.

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Nitrogen enrichment in macroalgae following mass coral mortality

    Vaughan, E., Wilson, S., Howlett, S., Parravicini, V., Williams, G. J. & Graham, N. A. J., 12 Apr 2021, In: Coral Reefs.

    Research output: Contribution to journalArticlepeer-review

  49. Published

    Foliar chemical attributes of the hybrid bred from Eucalyptus citriodora x E. torelliana and its parental taxa, and implications for fungal resistance

    Varshney, V. K., Pandey, A., Thoss, V., Kumar, A. & Ginwal, H. S., 1 Jan 2012, In: Annals of Forest Rsearch. 55, 1, p. 53-60

    Research output: Contribution to journalArticlepeer-review

  50. Published

    Identification of an avian polyomavirus associated with Adélie penguins (Pygoscelis adeliae)

    Varsani, A., Porzig, E. L., Jennnings, S., Kraberger, S., Farkas, K., Julian, L., Massaro, M., Ballard, G. & Ainley, D. G., 1 Apr 2015, In: Journal of General Virology. 96, p. 851-857

    Research output: Contribution to journalArticlepeer-review