College of Science & Engineering
- Article › Research › Peer-reviewed
- Published
Genetic diversity and thermal performance in invasive and native populations of African fig flies
Comeault, A., Wang, J., Tittes, S., Isbell, K., Ingley, S., Hurlbert, A. & Matute, D., 28 Feb 2020, In: Molecular Biology and Evolution.Research output: Contribution to journal › Article › peer-review
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Genetic diversity of the feminising microsporidian parasite Dictyocoela: New insights into host-specificity, sex and phylogeography
Wilkinson, T. J., Rock, J., Whiteley, N. M., Ovcharenko, M. O. & Ironside, J. E., 1 Aug 2011, In: International Journal for Parasitology. 41, 9, p. 959-966Research output: Contribution to journal › Article › peer-review
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Genetic homogeneity among breeding grounds and nursery areas of an exploited Lake Malawi cichlid fish.
Genner, M. J., Nichols, P., Shaw, P. W., Carvalho, G. R., Robinson, R. L. & Turner, G. F., 1 Sept 2008, In: Freshwater Biology. 53, 9, p. 1823-1831Research output: Contribution to journal › Article › peer-review
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Genetic management of the red squirrel, Sciurus vulgaris: a practical approach to regional conservation
Ogden, R., Shuttleworth, C., McEwing, R. & Cesarini, S., 26 Oct 2005, In: Conservation Genetics. 6, p. 511-525Research output: Contribution to journal › Article › peer-review
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Genetic organization of IncP-7 TOL plasmid pWW53 and the movement of its residing transposons.
Yano, H., Garruto, C., Sota, M., Ohtsubo, Y., Nagata, Y. J., Zylstra, G. J., Williams, P. A. & Tsuda, M., 1 Mar 2007, In: Plasmid. 57, 2, p. 231Research output: Contribution to journal › Article › peer-review
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Genetic parameters from univariate and bivariate analysis of egg and weight traits in Japanese quail.
Omed, H., Saatci, M., Omed, H. M. & Ap Dewi, I., 1 Feb 2006, In: Poultry Science. 85, 2, p. 185-190Research output: Contribution to journal › Article › peer-review
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Genetic parameters of growth and wood quality traits in Picea abies.
Cahalan, C. M., Hannrup, B., Cahalan, C., Chantre, G., Grabner, M., Karlsson, B., Le Bayon, I., Lloyd-Jones, G., Muller, U., Pereira, H., Rodrigues, J. C., Rosner, S., Rozenberg, P., Wilhelmsson, L. & Wimmer, R., 1 Feb 2004, In: Scandinavian Journal of Forest Research. 19, 1, p. 14-29Research output: Contribution to journal › Article › peer-review
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Genetic parameters of weights, ultrasonic muscle and fat depths, maternal effects and reproductive traits in Welsh Mountain sheep
Ap Dewi, I., Saatci, M. & Ulutas, Z., 1 Jun 2002, In: Animal Science. 74, 3, p. 399-408Research output: Contribution to journal › Article › peer-review
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Genetic population structure indicates sympatric speciation of Lake Malawi pelagic cichlids.
Shaw, P. W., Turner, G. F., Idid, M. R., Robinson, R. L. & Carvalho, G. R., 22 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1459, p. 2273-2280Research output: Contribution to journal › Article › peer-review
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Genetic structure of Carcinus maenas within its native range: larval dispersal and oceanographic variability.
Domingues, C. P., Creer, S., Taylor, M. I., Queiroga, H. & Carvalho, G. R., 14 Jul 2010, In: Marine Ecology Progress Series. 410, p. 111-123Research output: Contribution to journal › Article › peer-review
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Genetic tests for ecological and allopatric speciation in Anoles on an Island Archipelago.
Thorpe, R. S., Surget-Groba, Y. & Johansson, H., 29 Apr 2010, In: PLOS Genetics. 6, 4, p. e1000929Research output: Contribution to journal › Article › peer-review
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Genetic variation at microsatellite Loci in northern populations of the European flat oyster (Ostrea edulis).
Sobolewska, H. & Beaumont, A. R., 1 Aug 2005, In: Journal of the Marine Biological Association of the United Kingdom. 85, 4, p. 955-960Research output: Contribution to journal › Article › peer-review
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Genetic variation in a small bivalve along a retreating glacier fjord, King George Island, Antarctica.
Muñoz-Ramirez, C., Beltrán-Concha, M., Pérez-Araneda, K., Sands, C., Barnes, D., Roman-Gonzalez, A., De Lecea, A., Retallick, K., Van Landeghem, K., Sheen, K., Gonnelli, K., Scourse, J. D., Bascur, M. & Brante, A., 31 Dec 2021, In: Revista de Biología Marina y Oceanografía. 56, 2, p. 151-156Research output: Contribution to journal › Article › peer-review
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Genetically engineered proteins with two active sites for enhanced biocatalysis and synergistic chemo- and biocatalysis
Alonso, S., Santiago, G., Cea-Rama, I., Fernandez-Lopez, L., Coscolín, C., Modregger, J., Ressmann, A. K., Martinez-Martinez, M., Marrero, H., Bargiela, R., Pita, M., Gonzalez-Alfonso, J. L., Briand, M. L., Rojo, D., Barbas, C., Plou, F. J., Golyshin, P., Shahgaldian, P., Sanz-Aparicio, J., Guallar, V. & Ferrer, M., Mar 2020, In: Nature Catalysis. 3, 3, p. 319-328Research output: Contribution to journal › Article › peer-review
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Genetically mediated anti-predator responses in bivalve molluscs.
Fässler, S. M. & Kaiser, M. J., 15 Jul 2008, In: Marine Ecology Progress Series. 363, p. 217-225Research output: Contribution to journal › Article › peer-review
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Genetics of Scottish populations of the native oyster, Ostrea edulis: gene flow, human intervention and conservation.
Beaumont, A. R., Garcia, M. T., Honig, S. & Low, P., 1 Oct 2006, In: Aquatic Living Resources. 19, 4, p. 389-402Research output: Contribution to journal › Article › peer-review
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Genetics of superionic conductivity in lithium lanthanum titanates
Jay, E. E., Rushton, M. J. D., Chroneos, A., Grimes, R. W. & Kilner, J. A., 2015, In: Physical Chemistry Chemical Physics. 17, 1, p. 178-183Research output: Contribution to journal › Article › peer-review
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Genome Analysis of the Psychrotolerant Acidophile Acidithiobacillus ferrivorans CF27
Talla, E., Hedrich, S., Ji, B. Y., Johnson, D. B. & Bonnefoy, V., 1 Oct 2013, In: Advanced Materials Research. 825, p. 145-148Research output: Contribution to journal › Article › peer-review
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Genome Assembly of the Dyeing Poison Frog Provides Insights into the Dynamics of Transposable Element and Genome-Size Evolution
Dittrich, C., Hoelzl, F., Smith, S., Fouilloux, C. A., Parker, D. J., O'Connell, L. A., Knowles, L. S., Hughes, M., Fewings, A., Morgan, R., Rojas, B. & Comeault, A. A., 5 Jun 2024, In: Genome Biology and Evolution. 16, 6Research output: Contribution to journal › Article › peer-review
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Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T)
Hai, T., Golyshin, P. N., Werner, J., Chernikova, T. N., Tran, H., Ferrer, M., Yakimov, M. M., Teeling, H. & Golyshina, O. V., 18 Apr 2013, In: Genome Announcements. 1, 2, p. e00141-13Research output: Contribution to journal › Article › peer-review
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Genome Sequence of the Acidophilic Ferrous Iron-Oxidizing Isolate Acidithrix ferrooxidans Strain Py-F3, the Proposed Type Strain of the Novel Actinobacterial Genus Acidithrix
Eisen, S., Poehlein, A., Johnson, D. B., Daniel, R., Schlömann, M. & Mühling, M., 30 Apr 2015, In: Genome Announcements. 3, 2Research output: Contribution to journal › Article › peer-review
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Genome Sequence of the Acidophilic Iron Oxidizer Ferrimicrobium acidiphilum Strain T23T
Eisen, S., Poehlein, A., Johnson, D. B., Daniel, R., Schlömann, M. & Mühling, M., 30 Apr 2015, In: Genome Announcements. 3, 2Research output: Contribution to journal › Article › peer-review
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Genome Sequence of the Acidophilic Sulfate-Reducing Peptococcaceae Strain CEB3
Petzsch, P., Poehlein, A., Johnson, D. B., Daniel, R., Schlömann, M. & Mühling, M., 6 Aug 2015, In: Genome Announcements. 3, 4Research output: Contribution to journal › Article › peer-review
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Genome Sequence of the Moderately Acidophilic Sulfate-Reducing Firmicute Desulfosporosinus acididurans (Strain M1T)
Petzsch, P., Poehlein, A., Johnson, D. B., Daniel, R., Schlömann, M. & Mühling, M., 6 Aug 2015, In: Genome Announcements. 3, 4Research output: Contribution to journal › Article › peer-review
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Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica
Golyshina, O., Hai, T., Kube, M., Chernikova, T. N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M. E., Heipieper, H. J., Klages, S., Kotsyurbenko, O. R., Langer, I., Nechitaylo, T. Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P. A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J. P., Reva, O. N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A. F., Yakimov, M. M., Golyshina, O. V., Reinhardt, R. & Golyshin, P. N., 23 Jul 2013, In: Nature Communications. 4, p. 2156Research output: Contribution to journal › Article › peer-review
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Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.
Golyshin, P. N., Dos Santos, V. A., Kaiser, O., Ferrer, M., Sabirova, Y. S., Lunsdorf, H., Chernikova, T. N., Golyshina, O. V., Yakimov, M. M., Puhler, A. & Timmis, K. N., 19 Dec 2003, In: Journal of Biotechnology. 106, 2-3, p. 215-220Research output: Contribution to journal › Article › peer-review
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Genome sequence of a diabetes-prone rodent reveals a mutation hotspot around the ParaHox gene cluster
Hargreaves, A. D., Zhou, L., Christensen, J., Marletaz, F., Liu, S., Li, F., Jansen, P. G., Spiga, E., Hansen, M. T., Pedersen, S. V. H., Biswas, S., Seriwaka, K., Fox, B. A., Taylor, W. R., Mulley, J., Zhang, G., Heller, R. S. & Holland, P. W. H., 18 Jul 2017, In: Proceedings of the National Academy of Sciences of the United States of America: PNAS. 114, 29, p. 7677–7682Research output: Contribution to journal › Article › peer-review
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Genome sequence of a diverse goose circovirus recovered from greylag goose
Stenzel, T., Farkas, K. & Varsani, A., 30 Jul 2015, In: Genome Announcements. 3, 4, e00767-15.Research output: Contribution to journal › Article › peer-review
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Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea
Messina, E., Denaro, R., Crisafi, F., Smedile, F., Cappello, S., Genovese, M., Genovese, L., Giuliano, L., Russo, D., Ferrer, M. & Golyshin, P., 24 Oct 2015, In: Marine Genomics. 25, p. 11-13Research output: Contribution to journal › Article › peer-review
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Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
Schneiker, S., Martins dos Santos, V. A. P., Bartels, D., Bekel, T., Brecht, M., Buhrmester, J., Chernikova, T. N., Denaro, R., Ferrer, M., Gertler, C., Goesmann, A., Golyshina, O. V., Kaminski, F., Khachane, A. N., Lang, S., Linke, B., McHardy, A. C., Meyer, F., Nechitaylo, T., Pühler, A., Regenhardt, D., Rupp, O., Sabirova, J. S., Selbitschka, W., Yakimov, M. M., Timmis, K. N., Vorhölter, F.-J., Weidner, S., Kaiser, O. & Golyshin, P. N., 30 Jul 2006, In: Nature Biotechnology. 24, 8, p. 997-1004 8 p.Research output: Contribution to journal › Article › peer-review
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Genome sequences of Beet curly top Iran virus, Oat dwarf virus, Turnip curly top virus, and wheat dwarf virus identified in leafhoppers
Kamali, M., Heydarnejad, J., Pouramini, N., Masumi, H., Farkas, K., Kraberger, S. & Varsani, A., 23 Feb 2017, In: Genome Announcements. 5, 8, e01674-16.Research output: Contribution to journal › Article › peer-review
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Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle.
Kirkness, E. F., Hass, B. J., Sun, W., Braig, H. R., Perotti, M. A., Clark, J. M., Lee, S. H., Robertson, H. M., Kennedy, R. C., Elhaik, E., Gerlach, D., Kriventseva, E. V., Elsik, C. G., Graur, D., Hill, C. A., Veenstra, J. A., Walenz, B., Tubio, J. M., Ribeiro, J. M., Rozas, J., Johnston, J. S., Reese, J. T., Popadic, A., Tojo, M., Raoult, D., Reed, D. L., Tomoyasu, Y., Krause, E., Mittapalli, O., Margam, V. M., Li, H. M., Meyer, J. M., Johnson, R. M., Romero-Severson, J., VanZee, J. P., Alvarez-Ponce, D., Vieira, F. G., Aguade, M., Guirao-Rico, S., Anzola, J. M., Yoon, K. S., Strycharz, J. P., Unger, M. F., Christley, S., Lobo, N. F., Seufferheld, M. J., Wang, N., Dasch, G. A., Struchiner, C. J., Madey, G., Hannick, L. I., Bidwell, S., Joardar, V., Caler, E., Shao, R., Barker, S. C., Cameron, S., Bruggner, R. V., Regier, A., Johnson, J., Viswanathan, L., Utterback, T. R., Sutton, G. G., Lawson, D., Waterhouse, R. M., Venter, J. C., Strausberg, R. L., Berenbaum, M. R., Collins, F. H., Zdobnov, E. M. & Pittendrigh, B. R., 6 Jul 2010, In: Proceedings of the National Academy of Sciences of the USA. 107, 27, p. 12168-12173Research output: Contribution to journal › Article › peer-review
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Genome-wide data implicate terminal fusion automixis in king cobra facultative parthenogenesis.
Card, D. C., Vonk, F. J., Smallbrugge, S., Casewell, N. R., Wüster, W., Castoe, T. A., Schuett, G. W. & Booth, W., 31 Mar 2021, In: Scientific Reports. 11, 1, 9 p., 7271.Research output: Contribution to journal › Article › peer-review
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Genomic analysis of bacteria in the Acute Oak Decline pathobiome
Doonan, J., Denman, S., Pachebat, J. A. & McDonald, J., 8 Jan 2019, In: Microbial Genomics. 5, 1, 15 p.Research output: Contribution to journal › Article › peer-review
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Genomic and mechanistic insights into the biodegradation of organic pollutants.
Pieper, D. H., Dos Santos, V. A. & Golyshin, P. N., 1 Jun 2004, In: Current Opinion in Biotechnology. 15, 3, p. 215-224Research output: Contribution to journal › Article › peer-review
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Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions
Moya-Beltrán, A., Beard, S., Rojas-Villalobos, C., Issotta, F., Gallardo, Y., Ulloa, R., Giaveno, A., Degli Esposti, M., Johnson, D. B. & Quatrini, R., Nov 2021, In: The ISME Journal. 15, 11, p. 3221-3238Research output: Contribution to journal › Article › peer-review
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Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake
Malinsky, M., Challis, R. J., Tyers, A. M., Schiffels, S., Terai, Y., Ngatunga, B. P., Miska, E. A., Durbin, R., Genner, M. J. & Turner, G. F., 18 Dec 2015, In: Science. 350, 6267, p. 1493-1498Research output: Contribution to journal › Article › peer-review
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Genomic organisation of the seven ParaHox genes of coelacanths
Mulley, J. F. & Holland, P. W., 1 Sept 2014, In: Journal of Experimental Zoology Part B: Molecular and Developmental Evolution. 322, 6, p. 352-358Research output: Contribution to journal › Article › peer-review
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Genomic signatures of admixture and selection are shared among populations of Zaprionus indianus across the western hemisphere
Comeault, A., Kautt, A. F. & Matute, D. R., Dec 2021, In: Molecular Ecology. 30, 23, p. 6193-6210 18 p.Research output: Contribution to journal › Article › peer-review
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Genomic signatures of fifth autotrophic carbon assimilation pathway in bathypelagic Crenarchaeota
La Cono, V., Smedile, F., Ferrer, M., Golyshin, P. N., Giuliano, L. & Yakimov, M. M., Sept 2010, In: Microbial Biotechnology. 3, 5, p. 595-606 12 p.Research output: Contribution to journal › Article › peer-review
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Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua).
Nielsen, E. E., Hemmer-Hansen, J., Poulsen, N. A., Loeschcke, V., Moen, T., Johansen, T., Mittelholzer, C., Taranger, G. L., Ogden, R. & Carvalho, G. R., 1 Dec 2009, In: BMC Evolutionary Biology. 9, p. 276Research output: Contribution to journal › Article › peer-review
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Genomic survey of edible cockle (Cerastoderma edule) in the Northeast Atlantic: a baseline for sustainable management of its wild resources.
Vera, M., Maroso, F., Wilmes, S.-B., Malham, S., Groves, E., Hermida, M., Blanco, A., Fernandez, C., Bouza, C., Martinez, P. & Robins, P., 24 Feb 2022, In: Evolutionary Applications. 15, 2, p. 262-285 24 p.Research output: Contribution to journal › Article › peer-review
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Genomics reveals broad hybridization in deeply divergent Palearctic grass and water snakes (Natrix spp.)
Schöneberg, Y., Winter, S., Arribas, O., Di Nicola, M. R., Master, M., Owens, J. B., Rovatsos, M., Wüster, W., Janke, A. & Fritz, U., Jul 2023, In: Molecular Phylogenetics and Evolution. 184, 9 p., 107787.Research output: Contribution to journal › Article › peer-review
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Genomoviruses associated with mountain and western pine beetles
Kraberger, S., Hofstetter, R. W., Potter, K. A., Farkas, K. & Varsani, A., 2 Sept 2018, In: Virus Research. 256, p. 17-20Research output: Contribution to journal › Article › peer-review
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Geochemistry and microbiology of an impounded subterranean acidic water body at Mynydd Parys, Anglesey, Wales
Coupland, K. & Johnson, D. B., 1 Apr 2004, In: Geobiology. 2, 2, p. 77-86Research output: Contribution to journal › Article › peer-review
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Geoengineering: taking control of our planet's climate?
Ridgwell, A., Freeman, C. & Lampitt, R., 13 Sept 2012, In: Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 370, p. 4163-4165Research output: Contribution to journal › Article › peer-review
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Geographic and gender shape differences in the carapace of Liocarcinus depurator (Brachyura : Portunidae) using geometric morphometrics and the influence of a digitizing method.
Rufino, M. M., Abello, P. & Yule, A. B., 1 Aug 2006, In: Journal of Zoology. 269, 4, p. 458-465Research output: Contribution to journal › Article › peer-review
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Geographic and temporal variations in turbulent heat loss from lakes: A global analysis across 45 lakes
Woolway, R. I., Verburg, P., Lenters, J. D., Merchant, C. J., Hamilton, D. P., Brookes, J., de Eyto, E., Kelly, S., Healey, N. C., Hook, S., Laas, A., Pierson, D., Rusak, J. A., Kuha, J., Karjalainen, J., Kallio, K., Lepistoe, A. & Jones, I. D., 1 Nov 2018, In: Limnology and Oceanography. 63, 6, p. 2436-2449Research output: Contribution to journal › Article › peer-review
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Geographic distribution: Bothriopsis taeniata or Bothrops taeniatus (Speckled forest-pitviper).
Wuster, W., Freire, L. A., Garcia, F., Wüster, W. & Kuch, U., 1 Jan 2003, In: Herpetological Review. 34, p. 263Research output: Contribution to journal › Article › peer-review
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Geographical Ecology of Dry Forest Tree Communities in the West Indies
Franklin, J., Andrade, R., Daniels, M. L., Fairbairn, P., Fandino, M. C., Gillespie, T. W., González, G., González, O., Imbert, D., Kapos, V., Kelly, D. L., Marcano-Vega, H., Meléndez-Ackerman, E. J., McLaren, K. P., McDonald, M. A., Ripplinger, J., Rojas-Sandoval, J., Ross, M. S., Ruiz, J., Steadman, D. W., Tanner, E. V. J., Terrill, I. & Vennetier, M., May 2018, In: Journal of Biogeography. 45, 5, p. 1168-1181Research output: Contribution to journal › Article › peer-review